; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021357 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021357
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF538
Genome locationscaffold358:1381929..1382429
RNA-Seq ExpressionMS021357
SyntenyMS021357
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139405.1 uncharacterized protein LOC111010343 [Momordica charantia]3.0e-7695.65Show/hide
Query:  ALFG--SHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLI
        ALFG  SHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLI
Subjt:  ALFG--SHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLI

Query:  GVQGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        GVQGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQ S    L
Subjt:  GVQGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

XP_022937405.1 uncharacterized protein LOC111443705 [Cucurbita moschata]7.5e-5978.48Show/hide
Query:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ
        LFGS +    IS IIL VGF SS   S+S  D SS+H LLRSMGLPAGLVPKQVKSYT+ EN RLEV LD PCMA YENRVIF+SVFSANLSYGSLIGVQ
Subjt:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ

Query:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        G+SQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ +    L
Subjt:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

XP_022940173.1 uncharacterized protein LOC111445879 [Cucurbita moschata]5.2e-6080Show/hide
Query:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV
        ALF S + S WI S+IL +GF S   S+S   D+SS+HELLRSMGLPAGLVPKQVKSYTVAENGRLEV LD PCMA YENRVIF+SVFSANLSYGSLIGV
Subjt:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV

Query:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSFLRSL
        QG+SQEELFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ +F   L
Subjt:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSFLRSL

XP_022981634.1 uncharacterized protein LOC111480695 [Cucurbita maxima]5.7e-5980.13Show/hide
Query:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV
        ALF S + S WI S+IL +GF S    +S   D+SS+HELLRSMGLPAGLVPKQVKSYTVAENGRLEV LD PCMA YENRVIF+SVFSANLSYGSLIGV
Subjt:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV

Query:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSF
        +G+SQEELFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ +F
Subjt:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSF

XP_023535139.1 uncharacterized protein LOC111796654 [Cucurbita pepo subsp. pepo]1.3e-5877.85Show/hide
Query:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ
        LFGS +    IS IIL VGF SS   S+S  D SS+H LLRSMGLPAGLVPKQVKSYT+ EN RLEV LD PCMA YENRVIF+SVFSANLSYGSLIGV+
Subjt:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ

Query:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        G+SQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ +    L
Subjt:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

TrEMBL top hitse value%identityAlignment
A0A6J1CC85 uncharacterized protein LOC1110103431.5e-7695.65Show/hide
Query:  ALFG--SHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLI
        ALFG  SHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLI
Subjt:  ALFG--SHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLI

Query:  GVQGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        GVQGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQ S    L
Subjt:  GVQGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

A0A6J1FGJ2 uncharacterized protein LOC1114437053.6e-5978.48Show/hide
Query:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ
        LFGS +    IS IIL VGF SS   S+S  D SS+H LLRSMGLPAGLVPKQVKSYT+ EN RLEV LD PCMA YENRVIF+SVFSANLSYGSLIGVQ
Subjt:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ

Query:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        G+SQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ +    L
Subjt:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

A0A6J1FNJ8 uncharacterized protein LOC1114458792.5e-6080Show/hide
Query:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV
        ALF S + S WI S+IL +GF S   S+S   D+SS+HELLRSMGLPAGLVPKQVKSYTVAENGRLEV LD PCMA YENRVIF+SVFSANLSYGSLIGV
Subjt:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV

Query:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSFLRSL
        QG+SQEELFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ +F   L
Subjt:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSFLRSL

A0A6J1IHB3 uncharacterized protein LOC1114769448.1e-5977.85Show/hide
Query:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ
        LFGS +    IS IIL VGF SS   S+S  D SS+H LLRSMGLPAGLVPKQVKSYT+ EN RLEV LD PCMA YENRVIF+SVFSANLSYGSLIGV+
Subjt:  LFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQ

Query:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        G+SQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ +    L
Subjt:  GLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

A0A6J1J2E3 uncharacterized protein LOC1114806952.8e-5980.13Show/hide
Query:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV
        ALF S + S WI S+IL +GF S    +S   D+SS+HELLRSMGLPAGLVPKQVKSYTVAENGRLEV LD PCMA YENRVIF+SVFSANLSYGSLIGV
Subjt:  ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGV

Query:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSF
        +G+SQEELFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ +F
Subjt:  QGLSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCN-PQGSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5381.7e-4056.85Show/hide
Query:  IILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAE-NGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLP
        ++LLV F + SS       +SS+  LL + GLP GL P  V+SY++ +  G LEV L  PC A +ENRV FD V  ANLSYG L+G++GL+QEELFLWLP
Subjt:  IILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAE-NGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLP

Query:  VKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL
        VK I VN P+SG++L DIGVAHKQ+S SLFEDPP C P GS +  L
Subjt:  VKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSL

AT3G07460.1 Protein of unknown function, DUF5388.0e-2747.2Show/hide
Query:  SSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLPVKDIIVNYPTS
        S S+ I++  S+ E+L + GLP GL PK VK +TV  E GR  V L+  C A YE  + +D + S  + Y  +  + G+S +ELFLWL VK I V+ P+S
Subjt:  SSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLPVKDIIVNYPTS

Query:  GVILIDIGVAHKQLSLSLFEDPPDC
        G+I  D+GV  KQ SLSLFE P DC
Subjt:  GVILIDIGVAHKQLSLSLFEDPPDC

AT3G07460.2 Protein of unknown function, DUF5388.0e-2747.2Show/hide
Query:  SSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLPVKDIIVNYPTS
        S S+ I++  S+ E+L + GLP GL PK VK +TV  E GR  V L+  C A YE  + +D + S  + Y  +  + G+S +ELFLWL VK I V+ P+S
Subjt:  SSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLPVKDIIVNYPTS

Query:  GVILIDIGVAHKQLSLSLFEDPPDC
        G+I  D+GV  KQ SLSLFE P DC
Subjt:  GVILIDIGVAHKQLSLSLFEDPPDC

AT3G07470.1 Protein of unknown function, DUF5388.9e-2641.3Show/hide
Query:  IILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLP
        ++L+ G     S S++IS+  +++E+L + GLP+G+ PK V+ +T   E GR  V L+  C A YE  + +D+  +  +    +  + G+S +ELFLW P
Subjt:  IILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLWLP

Query:  VKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNP
        VK I V+ P+SG+I  D+GV  KQ SLSLFE P DC P
Subjt:  VKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNP

AT5G54530.1 Protein of unknown function, DUF5383.4e-4161.97Show/hide
Query:  ISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLW
        IS +ILL+     S S SS S   +VH++LRS GLPAGL+P++V SY +  +GRLEV L APC A +E  V F++V   NLSYGSL+GV+GLSQ+ELFLW
Subjt:  ISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFLW

Query:  LPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQG
        L VKDI+V  P SGVI+ DIGVA KQLSLSLFEDPP C P G
Subjt:  LPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCTTATTTGGCAGCCACAGCCACAGCCACTGGATCTCCTCAATAATCTTGTTGGTGGGTTTTTTTTCTTCTTCTTCTTCTTCTTCATCGATTTCTGATGAATCGTCGGT
CCACGAGCTTCTCCGGTCGATGGGGCTGCCGGCGGGGCTGGTGCCGAAGCAAGTGAAGTCGTACACGGTGGCTGAAAATGGGCGGCTGGAGGTGCTTTTGGATGCCCCAT
GTATGGCCACTTACGAGAACAGAGTCATTTTCGACTCTGTTTTCAGCGCCAATCTCTCCTACGGCAGCTTGATCGGAGTCCAGGGTTTGTCCCAGGAAGAGCTCTTTCTA
TGGCTTCCGGTTAAGGACATAATCGTCAATTACCCCACTTCTGGGGTCATTCTCATCGACATTGGCGTCGCCCATAAACAGCTCTCTCTCTCCCTCTTTGAAGATCCCCC
TGATTGTAACCCTCAAGGTAGTTTCCTTAGATCTCTCTGGATTTTTGCTTTGTTTCTCTTC
mRNA sequenceShow/hide mRNA sequence
GCCTTATTTGGCAGCCACAGCCACAGCCACTGGATCTCCTCAATAATCTTGTTGGTGGGTTTTTTTTCTTCTTCTTCTTCTTCTTCATCGATTTCTGATGAATCGTCGGT
CCACGAGCTTCTCCGGTCGATGGGGCTGCCGGCGGGGCTGGTGCCGAAGCAAGTGAAGTCGTACACGGTGGCTGAAAATGGGCGGCTGGAGGTGCTTTTGGATGCCCCAT
GTATGGCCACTTACGAGAACAGAGTCATTTTCGACTCTGTTTTCAGCGCCAATCTCTCCTACGGCAGCTTGATCGGAGTCCAGGGTTTGTCCCAGGAAGAGCTCTTTCTA
TGGCTTCCGGTTAAGGACATAATCGTCAATTACCCCACTTCTGGGGTCATTCTCATCGACATTGGCGTCGCCCATAAACAGCTCTCTCTCTCCCTCTTTGAAGATCCCCC
TGATTGTAACCCTCAAGGTAGTTTCCTTAGATCTCTCTGGATTTTTGCTTTGTTTCTCTTC
Protein sequenceShow/hide protein sequence
ALFGSHSHSHWISSIILLVGFFSSSSSSSSISDESSVHELLRSMGLPAGLVPKQVKSYTVAENGRLEVLLDAPCMATYENRVIFDSVFSANLSYGSLIGVQGLSQEELFL
WLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQGSFLRSLWIFALFLF