; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021375 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021375
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 3, chloroplastic
Genome locationscaffold358:1518205..1519062
RNA-Seq ExpressionMS021375
SyntenyMS021375
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009344 - nitrite reductase complex [NAD(P)H] (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607822.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.6e-10490.37Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KLQ  RKR KI G L KQ EVSSH  S TRRLALTS+ SVALFGNA VEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIA IGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEK+PLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

KAG7015220.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.5e-10490.83Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KLQ  RKR KI G L KQ EVSSH  S TRRLALTS+ SVALFGNA VEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEK+PLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022139520.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Momordica charantia]5.1e-11699.54Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEK+PLTELANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022940191.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita moschata]2.4e-10591.28Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KLQ  RKR KI+G L KQ EVSSH  S TRRLALTS+ SVALFGNASVEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEK+PLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022981605.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita maxima]9.0e-10590.83Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KL+  RKR KI+G L KQ EVSSH  S TRRLALTS+ SVALFGNASVEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEK+PLT LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N1 Uncharacterized protein3.2e-10088.99Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNG   KFSAIP LPKLQN  KRLKI GFL KQT+VSSH  S TRRLALTS+VSVALFGNAS EIASANEYWLDGPLPVPSV NNI NE+TGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EK+PL +LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A5A7TX10 Photosynthetic NDH subunit of lumenal location 39.4e-10088.53Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNG   KFSAIP LPKLQN  K+LKI GFL KQT+VSSH  S TRRLALTS+VSVALFGNAS EIASANEYWLDGPLPVPSV NNIANE+TGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EK+PL +LANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1CCI9 photosynthetic NDH subunit of lumenal location 3, chloroplastic2.5e-11699.54Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEK+PLTELANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1FHS2 photosynthetic NDH subunit of lumenal location 3, chloroplastic1.1e-10591.28Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KLQ  RKR KI+G L KQ EVSSH  S TRRLALTS+ SVALFGNASVEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEK+PLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1IZZ5 photosynthetic NDH subunit of lumenal location 3, chloroplastic4.4e-10590.83Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KL+  RKR KI+G L KQ EVSSH  S TRRLALTS+ SVALFGNASVEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEK+PLT LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

SwissProt top hitse value%identityAlignment
P12301 Oxygen-evolving enhancer protein 3, chloroplastic9.3e-1226.64Show/hide
Query:  MARLANLNGVSD-------KFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVE--IASANEYWLDGPLPVPSVYNN
        MA +A L G S        + S   +L      R  +  +G   +  +VS+   + T R A+   V+  L   + V+  +A A    +  P P+      
Subjt:  MARLANLNGVSD-------KFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVE--IASANEYWLDGPLPVPSVYNN

Query:  IANE---KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLE
          N    + GT  + K   Y+  +       R K  A ++L +   I +     ++  LRL+++++ YD   VISA    EK+ L EL ++LF + + L+
Subjt:  IANE---KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLE

Query:  DAAKQKNLSETESYYQQTTPILQEVMDRM
         AAK K+ +E E YY QT   + EV+ ++
Subjt:  DAAKQKNLSETESYYQQTTPILQEVMDRM

P83646 Oxygen-evolving enhancer protein 3, chloroplastic3.5e-1126.7Show/hide
Query:  LANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIA---SANEYWLDGPLP----VPSVYNNIANEK
        +A++ G+S     +P  P+    R RL ++       +V       T R A+  +V+  + G A  + A   +A    L  P P    +P   N  +++ 
Subjt:  LANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIA---SANEYWLDGPLP----VPSVYNNIANEK

Query:  TGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNL
          T   L+   Y+  +       R K  A D++ +  LI K    +VR  LRL+++++ YD   VI++    EK+ L +L  +LF   + L+ AAK K+ 
Subjt:  TGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNL

Query:  SETESYYQQTTPILQEVMDRM
         E E YY  T   L +V+ ++
Subjt:  SETESYYQQTTPILQEVMDRM

Q9SGH4 Photosynthetic NDH subunit of lumenal location 3, chloroplastic3.5e-6759.64Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSS--FTRRLALTSIVSVAL---FGNASVEIASANEYWLDGPLPVPSVYNNIANE
        MA   +LN ++   + +P LPKL   RK  K  GF  ++TE      S   TRR+ L   VS+ L    G  +V +A  N +W+DGPLP+P +YNNI NE
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSS--FTRRLALTSIVSVAL---FGNASVEIASANEYWLDGPLPVPSVYNNIANE

Query:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKN
        KTGTR+F+K G+Y+A+IGT+GR YR+K+ AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +K+PLT+LANRLFDNFEKLEDAAK KN
Subjt:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKN

Query:  LSETESYYQQTTPILQEVMDRMA
        L+ETES Y+ T  +LQEVM RMA
Subjt:  LSETESYYQQTTPILQEVMDRMA

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic4.5e-1429.83Show/hide
Query:  VSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLD-GPLPVPSVYNNIANEKTG-TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG
        V +  S  T R ++  +V+  L G + V+   A+   +  GP P PS       + +   R F   LK   Y+  +       R K  A D++ +  LI 
Subjt:  VSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLD-GPLPVPSVYNNIANEKTG-TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG

Query:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +    YV+  LR K++++ YD + +IS+    EK+ L +L  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Q9XI73 Photosynthetic NDH subunit of lumenal location 2, chloroplastic2.7e-1126.47Show/hide
Query:  FTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLR
        FTRR  LTS+++  + G A+   +SA                 +A EK GTRSF+K   ++  +  E    R+K+ A  L  M +++   +  YV  Y+R
Subjt:  FTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLR

Query:  LKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
        LK  ++  D  N ++   +  +    + AN L +N  +L+   +   + E+  YY++T   +  V++ +A
Subjt:  LKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA

Arabidopsis top hitse value%identityAlignment
AT1G14150.1 PsbQ-like 21.9e-1226.47Show/hide
Query:  FTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLR
        FTRR  LTS+++  + G A+   +SA                 +A EK GTRSF+K   ++  +  E    R+K+ A  L  M +++   +  YV  Y+R
Subjt:  FTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLR

Query:  LKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
        LK  ++  D  N ++   +  +    + AN L +N  +L+   +   + E+  YY++T   +  V++ +A
Subjt:  LKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA

AT3G01440.1 PsbQ-like 12.5e-6859.64Show/hide
Query:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSS--FTRRLALTSIVSVAL---FGNASVEIASANEYWLDGPLPVPSVYNNIANE
        MA   +LN ++   + +P LPKL   RK  K  GF  ++TE      S   TRR+ L   VS+ L    G  +V +A  N +W+DGPLP+P +YNNI NE
Subjt:  MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSS--FTRRLALTSIVSVAL---FGNASVEIASANEYWLDGPLPVPSVYNNIANE

Query:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKN
        KTGTR+F+K G+Y+A+IGT+GR YR+K+ AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +K+PLT+LANRLFDNFEKLEDAAK KN
Subjt:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKN

Query:  LSETESYYQQTTPILQEVMDRMA
        L+ETES Y+ T  +LQEVM RMA
Subjt:  LSETESYYQQTTPILQEVMDRMA

AT4G05180.1 photosystem II subunit Q-23.3e-1229.89Show/hide
Query:  QTEVSSHHSSFTRRLALTSIVSVALFGNASVE--IASANEYWLDGPLPVPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMAD
        Q  VS   SS   R ++  +V+  L G + V+   A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++ +  
Subjt:  QTEVSSHHSSFTRRLALTSIVSVALFGNASVE--IASANEYWLDGPLPVPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMAD

Query:  LIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
         I K    YV+  LRL+++++ YD + VISA    EK+ L +L  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  LIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.1 photosystem II subunit QA8.3e-1630Show/hide
Query:  VSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLD-GPLPVPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGK
        V +  S  T R ++  +V+  L G + V+   A+   +  GP P PS      +     R F   LK   Y+  +       R K  A D++ +  LI +
Subjt:  VSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLD-GPLPVPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGK

Query:  DTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
            YV+  LR K++++ YD + +IS+    EK+ L +L  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  DTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.2 photosystem II subunit QA3.2e-1529.83Show/hide
Query:  VSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLD-GPLPVPSVYNNIANEKTG-TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG
        V +  S  T R ++  +V+  L G + V+   A+   +  GP P PS       + +   R F   LK   Y+  +       R K  A D++ +  LI 
Subjt:  VSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLD-GPLPVPSVYNNIANEKTG-TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG

Query:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +    YV+  LR K++++ YD + +IS+    EK+ L +L  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCTCGCAAATTTAAACGGCGTCTCAGACAAATTCTCCGCCATCCCCAAGCTTCCAAAGCTTCAAAACCCTCGGAAGAGACTCAAAATAATTGGGTTTCTCGG
GAAACAAACAGAGGTTTCTTCTCATCACAGCTCATTCACAAGAAGATTGGCTTTAACCAGCATCGTCTCTGTTGCTCTGTTTGGCAATGCATCCGTCGAGATCGCTTCCG
CTAACGAGTACTGGCTCGATGGCCCTTTGCCTGTGCCGTCTGTTTACAACAACATTGCGAATGAGAAGACGGGGACCCGATCGTTTCTGAAGACGGGGATTTACATAGCC
AACATAGGGACAGAAGGAAGAAAATATAGACTAAAGAGATATGCCTTTGATCTTCTGGCTATGGCGGATTTGATCGGGAAAGATACTTTGAACTATGTAAGGAAGTATCT
TCGACTGAAATCGACTTTCATGTACTACGATTTCGACAATGTCATCTCGGCAGCTGCAGATGGTGAGAAGGAGCCTCTAACCGAGCTTGCGAACAGATTGTTCGACAACT
TCGAAAAGCTTGAAGATGCAGCAAAACAGAAGAATCTGAGTGAAACTGAATCCTATTATCAGCAGACAACTCCTATACTTCAAGAAGTCATGGATAGAATGGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTCTCGCAAATTTAAACGGCGTCTCAGACAAATTCTCCGCCATCCCCAAGCTTCCAAAGCTTCAAAACCCTCGGAAGAGACTCAAAATAATTGGGTTTCTCGG
GAAACAAACAGAGGTTTCTTCTCATCACAGCTCATTCACAAGAAGATTGGCTTTAACCAGCATCGTCTCTGTTGCTCTGTTTGGCAATGCATCCGTCGAGATCGCTTCCG
CTAACGAGTACTGGCTCGATGGCCCTTTGCCTGTGCCGTCTGTTTACAACAACATTGCGAATGAGAAGACGGGGACCCGATCGTTTCTGAAGACGGGGATTTACATAGCC
AACATAGGGACAGAAGGAAGAAAATATAGACTAAAGAGATATGCCTTTGATCTTCTGGCTATGGCGGATTTGATCGGGAAAGATACTTTGAACTATGTAAGGAAGTATCT
TCGACTGAAATCGACTTTCATGTACTACGATTTCGACAATGTCATCTCGGCAGCTGCAGATGGTGAGAAGGAGCCTCTAACCGAGCTTGCGAACAGATTGTTCGACAACT
TCGAAAAGCTTGAAGATGCAGCAAAACAGAAGAATCTGAGTGAAACTGAATCCTATTATCAGCAGACAACTCCTATACTTCAAGAAGTCATGGATAGAATGGCT
Protein sequenceShow/hide protein sequence
MARLANLNGVSDKFSAIPKLPKLQNPRKRLKIIGFLGKQTEVSSHHSSFTRRLALTSIVSVALFGNASVEIASANEYWLDGPLPVPSVYNNIANEKTGTRSFLKTGIYIA
NIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKEPLTELANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA