; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021396 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021396
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat
Genome locationscaffold358:1679690..1680427
RNA-Seq ExpressionMS021396
SyntenyMS021396
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588516.1 Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10483.06Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL
        SSEANKINTKVNFSISHSDED++DD      +VG+V E+ K+K LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+AVKMFD +SKDG THEAL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL

Query:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES
        QLFS IK+KGHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTA+FEAL R++
Subjt:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES

Query:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        +V+EARE + QMEAKGFV NEKDVKE+L+ KR RGPL RTLINILFNK
Subjt:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

KAG6588578.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-10684.74Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV--ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEA
        SSEANKINTKVNFSISHSDED++DD      +VG+V  E+ KSK LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+AVKMFD LSKDG THEA
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV--ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEA

Query:  LQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARE
        LQLFS IK+KGHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTAVFEAL R+
Subjt:  LQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARE

Query:  SRVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        ++VEEARE + QMEAKGFV NEKDVKE+L+ KR RGPLFRTLINILFNK
Subjt:  SRVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

XP_022156341.1 pentatricopeptide repeat-containing protein At4g38150-like [Momordica charantia]2.2e-12898.78Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
        SSEANKINTKVNFSISHSDEDDDDD   HHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL

Query:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
        FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
Subjt:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV

Query:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
Subjt:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

XP_022931685.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]5.0e-10483.06Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL
        SSEANKINTKVNFSI HSDED++DD      +VG+V E+ K+K LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+AVKMFD +SKDG THEAL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL

Query:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES
        QLFS IK+KGHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTP AYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTAVFEAL R++
Subjt:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES

Query:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        +V+EARE + QMEAKGFV NEKDVKE+L+ KR RGPLFRTLINILFNK
Subjt:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

XP_022969848.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]9.2e-10683.87Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL
        SSEANKINTKVNFSISHSDED++DD      +VG+V E+ K+K LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+A KMFD +SKDG THEAL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL

Query:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES
        QLFS IK+KGHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTAVFEAL R++
Subjt:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES

Query:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        +V+EARE + QMEAKGFVANEKDVKE+L+ KR RGPLFRTLINILFNK
Subjt:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

TrEMBL top hitse value%identityAlignment
A0A6J1DUN8 pentatricopeptide repeat-containing protein At4g38150-like1.1e-12898.78Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
        SSEANKINTKVNFSISHSDEDDDDD   HHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL

Query:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
        FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
Subjt:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV

Query:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
Subjt:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

A0A6J1F064 pentatricopeptide repeat-containing protein At4g38150-like2.4e-10483.06Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL
        SSEANKINTKVNFSI HSDED++DD      +VG+V E+ K+K LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+AVKMFD +SKDG THEAL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL

Query:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES
        QLFS IK+KGHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTP AYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTAVFEAL R++
Subjt:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES

Query:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        +V+EARE + QMEAKGFV NEKDVKE+L+ KR RGPLFRTLINILFNK
Subjt:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

A0A6J1I251 pentatricopeptide repeat-containing protein At4g38150-like4.4e-10683.87Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL
        SSEANKINTKVNFSISHSDED++DD      +VG+V E+ K+K LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+A KMFD +SKDG THEAL
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAV-ELDKSK-LPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEAL

Query:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES
        QLFS IK+KGHMPDVVAHTAVIEAYVNAGQ KEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTAVFEAL R++
Subjt:  QLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARES

Query:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        +V+EARE + QMEAKGFVANEKDVKE+L+ KR RGPLFRTLINILFNK
Subjt:  RVEEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

A0A6P3YRG9 pentatricopeptide repeat-containing protein At4g38150-like2.5e-9372.76Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
        SSE  +INTKVNFS+  SD +DDDD    + +    E+DKSKLPPPYDPF+KKPV+EEPEDPK+LQEIFH MR DGL N+AVKMFDALSKDG THEAL+L
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL

Query:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
        F+ IK+KGHMPDVVAHTAV+EAY NAGQ KEA KV++RMLASGVTPNAYTYTVLIKGLAADPK++GDAK +LLEMMG+G+RPNAG YTAVFEA A+E +V
Subjt:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV

Query:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        E+A +F+ +M+AKGF  +EK VKEVLN K  RGP+FRT++NILF K
Subjt:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

A0A6P3ZML7 pentatricopeptide repeat-containing protein At4g38150-like2.5e-9372.76Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
        SSE  +INTKVNFS+  SD +DDDD    + +    E+DKSKLPPPYDPF+KKPV+EEPEDPK+LQEIFH MR DGL N+AVKMFDALSKDG THEAL+L
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL

Query:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
        F+ IK+KGHMPDVVAHTAV+EAY NAGQ K+A KV++RMLASGVTPNAYTYTVLIKGLAADPK++GDAK +LLEMMG+G+RPNAG YTAVFEA A+E +V
Subjt:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV

Query:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        E+A +F+ QM+AKGF  +EK VKEVLN K  RGP+FRT++NILF K
Subjt:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

SwissProt top hitse value%identityAlignment
B8Y6I0 Pentatricopeptide repeat-containing protein 10, chloroplastic6.6e-1433.95Show/hide
Query:  IFHKMRTDGLQN---SAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKF
        +  +MR  G++    +A  +  A  +DG   EA+  F  +K +GH P VV + A+++ +  AG   EA +V   M  +G  P+A TY  L  G  A   F
Subjt:  IFHKMRTDGLQN---SAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKF

Query:  VGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKGFVANEKDVKEVL
          +A   L  M  +GL PNA TY  V  A     +V+EA     QM+  GFV N      VL
Subjt:  VGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKGFVANEKDVKEVL

O81028 Pentatricopeptide repeat-containing protein At2g26790, mitochondrial5.0e-1435.34Show/hide
Query:  FDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLE----MMGRGL
        FDALSK GR  EA +L   +K++G +PDV+ +T +I+ Y   G+  +A  +   M+ +G++P+  TY VL+ GLA +       +  +LE    M   G 
Subjt:  FDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLE----MMGRGL

Query:  RPNAGTYTAVFEALARESRVEEAREFMRQMEAK
        +PNA T + + E L    +V+EA +F   +E K
Subjt:  RPNAGTYTAVFEALARESRVEEAREFMRQMEAK

Q8S8P6 Pentatricopeptide repeat-containing protein At2g326305.0e-1432.68Show/hide
Query:  KMRTDGLQNSAV---KMFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGD
        +M   G++ S V    + D   K+G   EA +LF  +  KG  P+ + +  +I AY   G+ KEA K+   M A+G+ P++YTYT LI G       V +
Subjt:  KMRTDGLQNSAV---KMFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGD

Query:  AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKGFVANEK
        A     EM  +GL  N+ TYT +   L++  + +EA     +M+ KG+  + K
Subjt:  AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKGFVANEK

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655602.3e-1431.52Show/hide
Query:  MFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFV------------------
        M D+L K  R  EA  LF  +++KG  P+VV +TA+I+ Y  AG+  EAH +  +ML+    PN+ T+  LI GL AD K                    
Subjt:  MFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFV------------------

Query:  -------------GD---AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKG
                     GD   A +   +M+  G +P+A TYT   +   RE R+ +A + M +M   G
Subjt:  -------------GD---AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381509.8e-2634.26Show/hide
Query:  SISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDV
        ++  SD    DD      ++G V  D  + P P + + ++P+      P++  EIF KM+  GL  +AV M D L KDG   EA++LF ++++KG +P+V
Subjt:  SISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDV

Query:  VAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAK
        V +TAV+EA+  A + ++A +++ +M  +G+ PNA++Y VL++GL  +   + DA     EM+  G  PN  T+  + +AL R   VE+A+  +  +  K
Subjt:  VAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAK

Query:  GFVANEKDVKEVLNAK
        GF  N K VKE ++ +
Subjt:  GFVANEKDVKEVLNAK

Arabidopsis top hitse value%identityAlignment
AT2G26790.1 Pentatricopeptide repeat (PPR) superfamily protein3.6e-1535.34Show/hide
Query:  FDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLE----MMGRGL
        FDALSK GR  EA +L   +K++G +PDV+ +T +I+ Y   G+  +A  +   M+ +G++P+  TY VL+ GLA +       +  +LE    M   G 
Subjt:  FDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLE----MMGRGL

Query:  RPNAGTYTAVFEALARESRVEEAREFMRQMEAK
        +PNA T + + E L    +V+EA +F   +E K
Subjt:  RPNAGTYTAVFEALARESRVEEAREFMRQMEAK

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein6.9e-2734.26Show/hide
Query:  SISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDV
        ++  SD    DD      ++G V  D  + P P + + ++P+      P++  EIF KM+  GL  +AV M D L KDG   EA++LF ++++KG +P+V
Subjt:  SISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDV

Query:  VAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAK
        V +TAV+EA+  A + ++A +++ +M  +G+ PNA++Y VL++GL  +   + DA     EM+  G  PN  T+  + +AL R   VE+A+  +  +  K
Subjt:  VAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAK

Query:  GFVANEKDVKEVLNAK
        GF  N K VKE ++ +
Subjt:  GFVANEKDVKEVLNAK

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein6.9e-2734.26Show/hide
Query:  SISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDV
        ++  SD    DD      ++G V  D  + P P + + ++P+      P++  EIF KM+  GL  +AV M D L KDG   EA++LF ++++KG +P+V
Subjt:  SISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHMPDV

Query:  VAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAK
        V +TAV+EA+  A + ++A +++ +M  +G+ PNA++Y VL++GL  +   + DA     EM+  G  PN  T+  + +AL R   VE+A+  +  +  K
Subjt:  VAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAK

Query:  GFVANEKDVKEVLNAK
        GF  N K VKE ++ +
Subjt:  GFVANEKDVKEVLNAK

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein8.1e-8465.45Show/hide
Query:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL
        SSE  ++NTKVNFS+S  D D++ +      QV      +   PPPYDPFSKKP +EEPEDPKNLQEIFHKMRT+G  N AVKMFDALSKDGRTHEAL+L
Subjt:  SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQL

Query:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV
        FS IK+K  MPDVVAHTA++EAY NAGQ KE  KV++RMLASGV+PNAYTY+VLIKGLAAD K   DAK +LLEMMG G+ PNA TYTAVFEA  RE + 
Subjt:  FSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRV

Query:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK
        E ARE +++M+ KGFV +EK V+E L  K  RG +FRT+IN+LF+K
Subjt:  EEAREFMRQMEAKGFVANEKDVKEVLNAKRVRGPLFRTLINILFNK

AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-1531.52Show/hide
Query:  MFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFV------------------
        M D+L K  R  EA  LF  +++KG  P+VV +TA+I+ Y  AG+  EAH +  +ML+    PN+ T+  LI GL AD K                    
Subjt:  MFDALSKDGRTHEALQLFSIIKEKGHMPDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFV------------------

Query:  -------------GD---AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKG
                     GD   A +   +M+  G +P+A TYT   +   RE R+ +A + M +M   G
Subjt:  -------------GD---AKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATCAGAAGCCAACAAGATAAACACCAAAGTCAATTTCTCAATCTCACACTCGGACGAAGACGACGACGACGACCACCACCACCACCACCATCAGGTGGGCGCCGTGGA
ACTCGATAAAAGCAAACTTCCACCGCCTTATGACCCCTTCAGCAAGAAGCCCGTCGTGGAAGAGCCCGAAGACCCAAAGAACTTGCAGGAGATCTTCCACAAGATGAGGA
CAGATGGTCTCCAAAATAGTGCCGTCAAGATGTTCGACGCATTGTCTAAGGATGGCCGCACCCACGAGGCTCTGCAGCTGTTCTCTATAATTAAGGAGAAGGGGCACATG
CCTGATGTTGTGGCACACACAGCCGTGATAGAAGCCTACGTGAATGCGGGCCAGCGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAAA
TGCCTACACTTACACTGTTCTCATCAAAGGACTTGCTGCGGATCCGAAGTTTGTAGGCGACGCCAAGACCCACTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATG
CTGGAACCTACACCGCCGTCTTTGAGGCTCTTGCAAGGGAAAGCAGAGTGGAGGAAGCAAGAGAATTTATGAGGCAGATGGAGGCCAAGGGGTTTGTGGCTAATGAGAAG
GATGTTAAGGAGGTTCTCAACGCCAAAAGGGTAAGGGGACCCTTGTTTAGGACCCTCATCAACATTCTTTTTAACAAG
mRNA sequenceShow/hide mRNA sequence
TCATCAGAAGCCAACAAGATAAACACCAAAGTCAATTTCTCAATCTCACACTCGGACGAAGACGACGACGACGACCACCACCACCACCACCATCAGGTGGGCGCCGTGGA
ACTCGATAAAAGCAAACTTCCACCGCCTTATGACCCCTTCAGCAAGAAGCCCGTCGTGGAAGAGCCCGAAGACCCAAAGAACTTGCAGGAGATCTTCCACAAGATGAGGA
CAGATGGTCTCCAAAATAGTGCCGTCAAGATGTTCGACGCATTGTCTAAGGATGGCCGCACCCACGAGGCTCTGCAGCTGTTCTCTATAATTAAGGAGAAGGGGCACATG
CCTGATGTTGTGGCACACACAGCCGTGATAGAAGCCTACGTGAATGCGGGCCAGCGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAAA
TGCCTACACTTACACTGTTCTCATCAAAGGACTTGCTGCGGATCCGAAGTTTGTAGGCGACGCCAAGACCCACTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATG
CTGGAACCTACACCGCCGTCTTTGAGGCTCTTGCAAGGGAAAGCAGAGTGGAGGAAGCAAGAGAATTTATGAGGCAGATGGAGGCCAAGGGGTTTGTGGCTAATGAGAAG
GATGTTAAGGAGGTTCTCAACGCCAAAAGGGTAAGGGGACCCTTGTTTAGGACCCTCATCAACATTCTTTTTAACAAG
Protein sequenceShow/hide protein sequence
SSEANKINTKVNFSISHSDEDDDDDHHHHHHQVGAVELDKSKLPPPYDPFSKKPVVEEPEDPKNLQEIFHKMRTDGLQNSAVKMFDALSKDGRTHEALQLFSIIKEKGHM
PDVVAHTAVIEAYVNAGQRKEAHKVYLRMLASGVTPNAYTYTVLIKGLAADPKFVGDAKTHLLEMMGRGLRPNAGTYTAVFEALARESRVEEAREFMRQMEAKGFVANEK
DVKEVLNAKRVRGPLFRTLINILFNK