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MS021398 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021398
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold358:1689708..1689989
RNA-Seq ExpressionMS021398
SyntenyMS021398
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8000029.1 hypothetical protein FH972_004401 [Carpinus fangiana]2.1e-1057.32Show/hide
Query:  RTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRIS---CSRTR-----RRRPFLRL
        R ESFGY   +   +MMEKR+LFLRSYQFCRKRS+ E+IK  ++++KR+I  RLR A RI    CSR R     RRR FLRL
Subjt:  RTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRIS---CSRTR-----RRRPFLRL

KAG6590523.1 hypothetical protein SDJN03_15946, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1458.16Show/hide
Query:  HDNDGVRRTESFG-YCSDQGY-SLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRISC-----SRTRRRRPFLRLHHRRIHSLSC
        H +    R+ES   Y SDQGY S +MEKR+LFLRSYQFC K+SVP+KI   +LK+KR+IW RL+  L  SC     SR+RRRR  +RLHH  IHSLSC
Subjt:  HDNDGVRRTESFG-YCSDQGY-SLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRISC-----SRTRRRRPFLRLHHRRIHSLSC

XP_017418063.1 PREDICTED: uncharacterized protein LOC108328681 [Vigna angularis]2.8e-1049.49Show/hide
Query:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC
        R+ESFG Y  D  +S  MMEKR+LFLRSYQFCRK+S+ E++K  ++++K+I+W RLR A          +RI C    RRR F RL   H+R+I S SC
Subjt:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC

XP_023885587.1 uncharacterized protein LOC111997696 [Quercus suber]2.8e-1051.58Show/hide
Query:  RTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALR---ISCSRTR-----RRRPFLRLHHRRIHSLSCSLF
        R+ESFGY S+Q Y+ MMEKR+LFLRSYQFCRKRS+ E++K   +++KR+I  RLR A R   + CS  R     RRR FLRL + + +  S + F
Subjt:  RTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALR---ISCSRTR-----RRRPFLRLHHRRIHSLSCSLF

XP_031247927.1 uncharacterized protein LOC116105660 [Pistacia vera]9.5e-1147.57Show/hide
Query:  RTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRIS---CSRTR-----RRRPFLR--------LHHRRIHSLSC
        R++SFGY      ++MMEKR+LFLRSYQFCRK+SV E+IK  ++++KR++W +LR A +I     SR R     RRR F+R        LHH   HS SC
Subjt:  RTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRIS---CSRTR-----RRRPFLR--------LHHRRIHSLSC

Query:  SLF
        S +
Subjt:  SLF

TrEMBL top hitse value%identityAlignment
A0A0L9U9C1 Uncharacterized protein1.3e-1049.49Show/hide
Query:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC
        R+ESFG Y  D  +S  MMEKR+LFLRSYQFCRK+S+ E++K  ++++K+I+W RLR A          +RI C    RRR F RL   H+R+I S SC
Subjt:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC

A0A0S3S014 Uncharacterized protein1.3e-1049.49Show/hide
Query:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC
        R+ESFG Y  D  +S  MMEKR+LFLRSYQFCRK+S+ E++K  ++++K+I+W RLR A          +RI C    RRR F RL   H+R+I S SC
Subjt:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC

A0A1S3TPD2 uncharacterized protein LOC106757494 isoform X21.7e-1048.48Show/hide
Query:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC
        R+ESFG Y  D  +S  MMEKR+LFLRSYQFCRK+S+ E++K  ++++K+++W RLR A          +RI C    RRR F RL   H+R+I S SC
Subjt:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC

A0A1S3TPK1 uncharacterized protein LOC106757494 isoform X11.7e-1048.48Show/hide
Query:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC
        R+ESFG Y  D  +S  MMEKR+LFLRSYQFCRK+S+ E++K  ++++K+++W RLR A          +RI C    RRR F RL   H+R+I S SC
Subjt:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC

V7D0U9 Uncharacterized protein1.7e-1048.48Show/hide
Query:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC
        R+ESFG Y  D  +S  MMEKR+LFLRSYQFCRK+S+ E++K  ++++K+++W RLR A          +RI C    RRR F RL   H+R+I S SC
Subjt:  RTESFG-YCSDQGYS-LMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA----------LRISCSRTRRRRPFLRL---HHRRIHSLSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26731.1 unknown protein6.1e-0846.51Show/hide
Query:  VRRTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA---LRISCSRTR-----RRRPFLRLHH
        V R+ S G      Y   MEKR+LFLRSYQF RK+S  EK+   V ++KR++  RLR A    R+  SR R     RRR F RL H
Subjt:  VRRTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPA---LRISCSRTR-----RRRPFLRLHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATGATAATGATGGTGTTCGACGGACCGAATCCTTTGGATATTGTTCAGATCAGGGCTACTCCTTGATGATGGAGAAGCGGCGGCTGTTTCTGAGGAGCTATCAGTTCTG
CAGGAAAAGGAGTGTGCCCGAGAAGATCAAGTTTTTCGTCCTCAAACTGAAGAGAATTATATGGGCGAGGCTACGCCCTGCGCTTAGGATCTCCTGCTCCCGCACCCGCC
GGAGAAGACCATTTCTTCGCCTCCACCACCGCCGCATTCACTCCCTCTCTTGTTCCCTCTTC
mRNA sequenceShow/hide mRNA sequence
CATGATAATGATGGTGTTCGACGGACCGAATCCTTTGGATATTGTTCAGATCAGGGCTACTCCTTGATGATGGAGAAGCGGCGGCTGTTTCTGAGGAGCTATCAGTTCTG
CAGGAAAAGGAGTGTGCCCGAGAAGATCAAGTTTTTCGTCCTCAAACTGAAGAGAATTATATGGGCGAGGCTACGCCCTGCGCTTAGGATCTCCTGCTCCCGCACCCGCC
GGAGAAGACCATTTCTTCGCCTCCACCACCGCCGCATTCACTCCCTCTCTTGTTCCCTCTTC
Protein sequenceShow/hide protein sequence
HDNDGVRRTESFGYCSDQGYSLMMEKRRLFLRSYQFCRKRSVPEKIKFFVLKLKRIIWARLRPALRISCSRTRRRRPFLRLHHRRIHSLSCSLF