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MS021403 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021403
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold358:1703528..1703695
RNA-Seq ExpressionMS021403
SyntenyMS021403
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA08068.1 hypothetical protein BVC80_1729g16 [Macleaya cordata]2.9e-0739.29Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI
        W+ IC+ +  F+K +   +  G K+ FWED W+T++PL + FP++Y++++SK+F I
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]6.1e-0542.31Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK
        WK I S    F  +LR  +G G    FWEDTW+ ++PLS+ FP +Y ++  K
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK

XP_026396605.1 uncharacterized protein LOC113291268 [Papaver somniferum]2.7e-0547.17Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKS
        WK I  +   F KN+RFK+  G K  F ED W+ + PL+I+FP++Y I  SKS
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKS

XP_026419474.1 uncharacterized protein LOC113315410 [Papaver somniferum]1.4e-0646.43Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI
        WK I + +  F++  RF+LG G  I FWEDTW+  +PL +VFP +YSIT +K + +
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI

XP_026444591.1 uncharacterized protein LOC113344934 [Papaver somniferum]1.0e-0441.51Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKS
        WK +      F+ N++FKL  G KIIFW+D W+ S  L   FP++Y+I+  K+
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKS

TrEMBL top hitse value%identityAlignment
A0A200QC53 Uncharacterized protein1.4e-0739.29Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI
        W+ IC+ +  F+K +   +  G K+ FWED W+T++PL + FP++Y++++SK+F I
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI

A0A6J1DFI2 uncharacterized protein LOC1110196242.9e-0542.31Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK
        WK I S    F  +LR  +G G    FWEDTW+ ++PLS+ FP +Y ++  K
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK

A0A7C9A8L9 Uncharacterized protein (Fragment)9.1e-0740.38Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK
        WK I ST+ FF+ ++RF++G G +++FW+D W   +PL   FP+++ +T+S+
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK

A0A7C9AAT2 Uncharacterized protein (Fragment)9.1e-0740.38Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK
        WK I ST+ FF+ ++RF++G G +++FW+D W   +PL   FP+++ +T+S+
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK

A0A7N2MXJ3 zf-RVT domain-containing protein5.9e-0644.23Show/hide
Query:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK
        W+ IC     F KN+RF++G G +++FW D W    PL + FPSVY I ++K
Subjt:  WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAAGGAAATCTGCAGTACTATAATTTTCTTTGAGAAAAACTTAAGATTTAAACTTGGAGGTGGCAGGAAAATCATATTCTGGGAAGATACTTGGGTCACATCACGCCC
TTTGAGTATTGTTTTTCCCTCTGTTTACTCTATCACCAACTCCAAATCTTTCCACATT
mRNA sequenceShow/hide mRNA sequence
TGGAAGGAAATCTGCAGTACTATAATTTTCTTTGAGAAAAACTTAAGATTTAAACTTGGAGGTGGCAGGAAAATCATATTCTGGGAAGATACTTGGGTCACATCACGCCC
TTTGAGTATTGTTTTTCCCTCTGTTTACTCTATCACCAACTCCAAATCTTTCCACATT
Protein sequenceShow/hide protein sequence
WKEICSTIIFFEKNLRFKLGGGRKIIFWEDTWVTSRPLSIVFPSVYSITNSKSFHI