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MS021411 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021411
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBnaC03g34390D protein
Genome locationscaffold358:1784448..1784714
RNA-Seq ExpressionMS021411
SyntenyMS021411
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588556.1 hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3279.55Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        GGN+ KKSH SFS F FFKSKR+RKG+HY+  D++SCP KVWPSDADKCH W+AEPGIDRKAKDYIDRIHRNRVLETERQT TV P+G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

KAG6590516.1 hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2772.53Show/hide
Query:  GGNRQKK-SHSFSIFSFFKSKRSRKGDHYD---SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        GGNR KK S SFS  +FFKSKRSRKGD YD   +WDD+S P+KVWPSDADK HHW+AEPGIDRKA DYI RIH +RVLET+ QT TV P+G
Subjt:  GGNRQKK-SHSFSIFSFFKSKRSRKGDHYD---SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]2.3e-3077.17Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SW-DDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        GGNRQKKSH SFSIFSFFKSKR RKGDHYD   +W D++   NKVWPSD DK HHWIAEPGIDRKAKDYIDRI+RNRV E+ERQT T+ P G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SW-DDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]2.0e-2669.23Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        G +RQKK+H SFSIFSFFKSKR RKGD Y+   +W+DV   +KVWPSD DK + W+AEPGIDRKAKDYIDRI++NRV ETERQT T+ P G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

KGN65989.1 hypothetical protein Csa_006868 [Cucumis sativus]1.1e-2973.68Show/hide
Query:  GGNRQKKSH--SFSIFSFFKSKRS-RKGDHY-------DSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQP
        GGNRQKKSH  SFS    FKSKRS RKGDHY       +SW+D SCP+KVWPSDADKCH W+AEPGIDRKAKDYIDRIHRNRV ET RQT T+ P
Subjt:  GGNRQKKSH--SFSIFSFFKSKRS-RKGDHY-------DSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQP

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein1.1e-3077.17Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SW-DDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        GGNRQKKSH SFSIFSFFKSKR RKGDHYD   +W D++   NKVWPSD DK HHWIAEPGIDRKAKDYIDRI+RNRV E+ERQT T+ P G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SW-DDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

A0A0A0K8W0 Uncharacterized protein9.7e-2769.23Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        G +RQKK+H SFSIFSFFKSKR RKGD Y+   +W+DV   +KVWPSD DK + W+AEPGIDRKAKDYIDRI++NRV ETERQT T+ P G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

A0A0A0KAK6 Uncharacterized protein2.2e-2668.48Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD----SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        G NRQKK+H SFSIFSFFKS+R RKGDH +      D++    KVWPSD DK HHW+AEPGIDRKAKDYIDRI+RNRV E+ERQT T+ P G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD----SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

A0A0A0KBW1 Uncharacterized protein3.2e-3075Show/hide
Query:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SW-DDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG
        GGNRQKKSH SFSIFSFFKS+R RKGDHYD   +W D++   NKVWPSD DK HHW+AEPGIDRKAKDYIDRI+RNRV E+ERQT T+ P G
Subjt:  GGNRQKKSH-SFSIFSFFKSKRSRKGDHYD---SW-DDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTG

A0A0A0LY99 Uncharacterized protein5.5e-3073.68Show/hide
Query:  GGNRQKKSH--SFSIFSFFKSKRS-RKGDHY-------DSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQP
        GGNRQKKSH  SFS    FKSKRS RKGDHY       +SW+D SCP+KVWPSDADKCH W+AEPGIDRKAKDYIDRIHRNRV ET RQT T+ P
Subjt:  GGNRQKKSH--SFSIFSFFKSKRS-RKGDHY-------DSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein2.7e-0531.58Show/hide
Query:  GNRQKKSHSFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETE
        G R+K S SFS+     ++ S++ D+++    ++   ++  +D D C   IAEP IDR+A  +I + H   + +TE
Subjt:  GNRQKKSHSFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETE

AT3G05858.1 unknown protein1.3e-1550Show/hide
Query:  GGNRQKKSHSFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFT
        G NR   S  FS+FSFFK++RS + +   SWDD     K   SD DK  +W+AEPGIDRKA  +I + H  RV E+ERQT +
Subjt:  GGNRQKKSHSFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFT

AT5G26620.1 unknown protein4.3e-1158.82Show/hide
Query:  SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQT
        SWDDV    K W SD DK  +W+AEPGIDRKA  +I + H +RV E+ERQT
Subjt:  SWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGGCAACAGGCAGAAGAAATCTCACTCCTTCTCTATCTTCAGCTTCTTCAAATCCAAAAGGAGTAGAAAAGGAGACCATTACGACAGCTGGGACGACGTGTCGTGCCC
CAACAAGGTGTGGCCAAGCGACGCTGACAAATGCCACCATTGGATCGCCGAGCCTGGCATCGACAGAAAAGCCAAAGATTACATCGATAGGATTCATCGGAACCGTGTAT
TGGAGACCGAACGCCAAACCTTTACGGTCCAACCCACGGGAAACGTG
mRNA sequenceShow/hide mRNA sequence
GGAGGCAACAGGCAGAAGAAATCTCACTCCTTCTCTATCTTCAGCTTCTTCAAATCCAAAAGGAGTAGAAAAGGAGACCATTACGACAGCTGGGACGACGTGTCGTGCCC
CAACAAGGTGTGGCCAAGCGACGCTGACAAATGCCACCATTGGATCGCCGAGCCTGGCATCGACAGAAAAGCCAAAGATTACATCGATAGGATTCATCGGAACCGTGTAT
TGGAGACCGAACGCCAAACCTTTACGGTCCAACCCACGGGAAACGTG
Protein sequenceShow/hide protein sequence
GGNRQKKSHSFSIFSFFKSKRSRKGDHYDSWDDVSCPNKVWPSDADKCHHWIAEPGIDRKAKDYIDRIHRNRVLETERQTFTVQPTGNV