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MS021449 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021449
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold381:47434..47751
RNA-Seq ExpressionMS021449
SyntenyMS021449
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.9e-0837.14Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR
        ++K+ +  P L     L Q++ D AD+K +P+ F +  SH SP  F+A LQ SPQ+FT FS D+ H S++ +   ++ ILD     F+SM + L ++ N+
Subjt:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR

Query:  LALQF
        + L+F
Subjt:  LALQF

KGN45635.1 hypothetical protein Csa_005498 [Cucumis sativus]2.6e-0937.5Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL
        M  + ++ PFL   ++L++  + A+++ SP+MFSL V H +  L V A Q  PQFF +F  + TH S+IPI  L+N I  M   + +S++ F+ +  +RL
Subjt:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL

Query:  ALQF
         L+F
Subjt:  ALQF

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]2.9e-0837.14Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR
        ++K+ +  P L     L Q++ D AD+K +P+ F +  SH SP  F+A LQ SPQ+FT FS D+ H S++ +   ++ ILD     F+SM + L ++ N+
Subjt:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR

Query:  LALQF
        + L+F
Subjt:  LALQF

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]1.4e-1042.31Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL
        ++++  I P       LT++A RAD+K SPT F + VS  SP  F+AALQ SP+FFT F+ D  H SRI +  L+++++D   R + +M   L E  NRL
Subjt:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL

Query:  ALQF
         L+F
Subjt:  ALQF

XP_031744101.1 uncharacterized protein LOC116404781 [Cucumis sativus]2.6e-0937.5Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL
        M  + ++ PFL   ++L++  + A+++ SP+MFSL V H +  L V A Q  PQFF +F  + TH S+IPI  L+N I  M   + +S++ F+ +  +RL
Subjt:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL

Query:  ALQF
         L+F
Subjt:  ALQF

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein1.3e-0937.5Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL
        M  + ++ PFL   ++L++  + A+++ SP+MFSL V H +  L V A Q  PQFF +F  + TH S+IPI  L+N I  M   + +S++ F+ +  +RL
Subjt:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL

Query:  ALQF
         L+F
Subjt:  ALQF

A0A0A0K902 Uncharacterized protein2.4e-0837.14Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR
        ++K+ +  P L       Q++ D AD+K +P+ F +  SH SP  F+A LQ SPQ+FT FS DH H S++ +   ++ ILD     F+SM + L ++ N+
Subjt:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR

Query:  LALQF
        + L+F
Subjt:  LALQF

A0A1S3CL88 uncharacterized protein LOC1035022501.4e-0837.14Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR
        ++K+ +  P L     L Q++ D AD+K +P+ F +  SH SP  F+A LQ SPQ+FT FS D+ H S++ +   ++ ILD     F+SM + L ++ N+
Subjt:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR

Query:  LALQF
        + L+F
Subjt:  LALQF

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein1.4e-0837.14Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR
        ++K+ +  P L     L Q++ D AD+K +P+ F +  SH SP  F+A LQ SPQ+FT FS D+ H S++ +   ++ ILD     F+SM + L ++ N+
Subjt:  MLKVNHIHPFLQGFFLLTQLA-DRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNR

Query:  LALQF
        + L+F
Subjt:  LALQF

A0A6J1CUU8 uncharacterized protein LOC1110149886.8e-1142.31Show/hide
Query:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL
        ++++  I P       LT++A RAD+K SPT F + VS  SP  F+AALQ SP+FFT F+ D  H SRI +  L+++++D   R + +M   L E  NRL
Subjt:  MLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRL

Query:  ALQF
         L+F
Subjt:  ALQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGATCAATGTTGAAGGTGAACCATATCCATCCATTTCTGCAAGGATTCTTCCTCCTCACTCAACTCGCAGACAGAGCCGACATGAAACTCTCTCCCACAATGTTCTCCCT
CAAAGTCTCCCATTTCTCCCCCCATTTGTTCGTCGCAGCCCTTCAATTTTCCCCTCAATTCTTCACCTTCTTCTCCTTCGACCACACCCACTGCTCAAGAATTCCCATCC
ACCGTCTCTACAATCTCATTCTCGACATGTCGCACAGAAAATTCTCCTCCATGGCCCTCTTTCTTGACGAAGAACACAACCGCCTGGCCCTCCAATTT
mRNA sequenceShow/hide mRNA sequence
CGATCAATGTTGAAGGTGAACCATATCCATCCATTTCTGCAAGGATTCTTCCTCCTCACTCAACTCGCAGACAGAGCCGACATGAAACTCTCTCCCACAATGTTCTCCCT
CAAAGTCTCCCATTTCTCCCCCCATTTGTTCGTCGCAGCCCTTCAATTTTCCCCTCAATTCTTCACCTTCTTCTCCTTCGACCACACCCACTGCTCAAGAATTCCCATCC
ACCGTCTCTACAATCTCATTCTCGACATGTCGCACAGAAAATTCTCCTCCATGGCCCTCTTTCTTGACGAAGAACACAACCGCCTGGCCCTCCAATTT
Protein sequenceShow/hide protein sequence
RSMLKVNHIHPFLQGFFLLTQLADRADMKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF