CuGenDBv2

Gene ID	MS021453
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold381:53752..53928
RNA-Seq Expression	MS021453
Synteny	MS021453
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QBW96545.1 photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium aff. lobatum SJK-2019]

4.7e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

QRN71803.1 photosystem I P700 apoprotein A1 [Phanera variegata var. variegata]

4.7e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

YP_009431390.1 photosystem I P700 apoprotein A1 [Anthericum ramosum]

4.7e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

YP_009681135.1 photosystem I P700 apoprotein A1 [Sagittaria trifolia]

4.7e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

YP_009936510.1 photosystem I P700 chlorophyll A apoprotein A1 [Calanthe rubens]

4.7e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

TrEMBL top hits

e value

%identity

Alignment

A0A218KG56 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

A0A291PUL4 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

A0A346Q3Y4 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

A0A481XQM4 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

A0A4D5YBY5 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-24

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

SwissProt top hits

e value

%identity

Alignment

A4QJB5 Photosystem I P700 chlorophyll a apoprotein A1

6.2e-27

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A1

6.2e-27

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

A4QK18 Photosystem I P700 chlorophyll a apoprotein A1

6.2e-27

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

Q3V534 Photosystem I P700 chlorophyll a apoprotein A1

6.2e-27

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A1

6.2e-27

100

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

4.3e-07

47.37

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Query:  WQELIESIVWAHNKLKVAP----ATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLA
        WQELIE++ WAH +  +A       +P ALSIVQ R VG+ H+ +G I T  AF +A
Subjt:  WQELIESIVWAHNKLKVAP----ATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLA

ATCG00350.1 Photosystem I, PsaA/PsaB protein

5.7e-28

98.31

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Query:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        WQELIESIVWAHNKLKVAPATQPRALSI+QGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

Sequences

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CDS sequence

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TGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAAC
CCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTCGGA

mRNA sequence

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TGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAAC
CCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTCGGA

Protein sequence

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WQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

MS021453 (gene) of Bitter gourd (TR) v1 genome