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MS021455 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021455
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold381:70238..70567
RNA-Seq ExpressionMS021455
SyntenyMS021455
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646596.1 hypothetical protein Csa_004903, partial [Cucumis sativus]5.7e-1552.29Show/hide
Query:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR
        MFL +L     LL+ATS  A I+ DDA VKFTP    +I+SHR+ RF   L+L   +FTS+SV  +HSSK+SL +F  A+LDG  + +SMTIHLLD TN+
Subjt:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR

Query:  LILTFENSS
        +IL F+  S
Subjt:  LILTFENSS

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]3.9e-1651.85Show/hide
Query:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL
        MFL RL+    L++ATS+LA +A DA VKFTP +  +I S+R+ +F   L+L R  FT++SV  N SSK+SL  F  A+LDG  + SSMTIHLLD+TN++
Subjt:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL

Query:  ILTFENSS
        +L FE  S
Subjt:  ILTFENSS

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]1.7e-1451.38Show/hide
Query:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR
        MFL +L     LL+ATS LA I+ D+A +KFTP    +IASHR+ RF   L+L   +FT++SV  +HSSK+SL +F  A+LDG  + +SMTIHLLD TN+
Subjt:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR

Query:  LILTFENSS
        +IL F+  S
Subjt:  LILTFENSS

XP_022156149.1 uncharacterized protein LOC111023105 [Momordica charantia]2.9e-2769.44Show/hide
Query:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL
        MF  R+  IG LL+ATS L  IAD+ TVK TPEL SMIASHR+SRFDV+LKLPR+FFT+YSV+L H+S+IS+HAF +ALLD S TS SMTIH+ DS NR 
Subjt:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL

Query:  ILTFENSS
        IL FENSS
Subjt:  ILTFENSS

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]5.7e-1552.29Show/hide
Query:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR
        MFL +L     LL+ATS  A I+ DDA VKFTP    +I+SHR+ RF   L+L   +FTS+SV  +HSSK+SL +F  A+LDG  + +SMTIHLLD TN+
Subjt:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR

Query:  LILTFENSS
        +IL F+  S
Subjt:  LILTFENSS

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein2.8e-1552.29Show/hide
Query:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR
        MFL +L     LL+ATS  A I+ DDA VKFTP    +I+SHR+ RF   L+L   +FTS+SV  +HSSK+SL +F  A+LDG  + +SMTIHLLD TN+
Subjt:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR

Query:  LILTFENSS
        +IL F+  S
Subjt:  LILTFENSS

A0A1S3C8J1 uncharacterized protein LOC1034980101.9e-1651.85Show/hide
Query:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL
        MFL RL+    L++ATS+LA +A DA VKFTP +  +I S+R+ +F   L+L R  FT++SV  N SSK+SL  F  A+LDG  + SSMTIHLLD+TN++
Subjt:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL

Query:  ILTFENSS
        +L FE  S
Subjt:  ILTFENSS

A0A1S3CL88 uncharacterized protein LOC1035022508.0e-1551.38Show/hide
Query:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR
        MFL +L     LL+ATS LA I+ D+A +KFTP    +IASHR+ RF   L+L   +FT++SV  +HSSK+SL +F  A+LDG  + +SMTIHLLD TN+
Subjt:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR

Query:  LILTFENSS
        +IL F+  S
Subjt:  LILTFENSS

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein8.0e-1551.38Show/hide
Query:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR
        MFL +L     LL+ATS LA I+ D+A +KFTP    +IASHR+ RF   L+L   +FT++SV  +HSSK+SL +F  A+LDG  + +SMTIHLLD TN+
Subjt:  MFLARLDLIGHLLNATSILAIIA-DDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNR

Query:  LILTFENSS
        +IL F+  S
Subjt:  LILTFENSS

A0A6J1DSH6 uncharacterized protein LOC1110231051.4e-2769.44Show/hide
Query:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL
        MF  R+  IG LL+ATS L  IAD+ TVK TPEL SMIASHR+SRFDV+LKLPR+FFT+YSV+L H+S+IS+HAF +ALLD S TS SMTIH+ DS NR 
Subjt:  MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRL

Query:  ILTFENSS
        IL FENSS
Subjt:  ILTFENSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGCCAGGCTTGATCTCATTGGTCATCTTCTGAACGCCACCTCCATCCTCGCTATAATCGCGGACGACGCCACCGTGAAGTTTACCCCGGAGTTGTCCTCGAT
GATCGCCTCGCACCGTGCCTCTCGCTTCGACGTGCTGCTGAAATTGCCGCGCCATTTCTTCACCTCCTACTCCGTCATTCTGAATCACAGTTCAAAGATTTCCCTCCACG
CCTTCAAGAGTGCTCTCTTGGATGGCTCAATTACTTCCTCCTCAATGACCATCCATCTTCTCGATTCCACCAATCGCTTGATCCTTACATTTGAGAATTCAAGTAAGTTA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGCCAGGCTTGATCTCATTGGTCATCTTCTGAACGCCACCTCCATCCTCGCTATAATCGCGGACGACGCCACCGTGAAGTTTACCCCGGAGTTGTCCTCGAT
GATCGCCTCGCACCGTGCCTCTCGCTTCGACGTGCTGCTGAAATTGCCGCGCCATTTCTTCACCTCCTACTCCGTCATTCTGAATCACAGTTCAAAGATTTCCCTCCACG
CCTTCAAGAGTGCTCTCTTGGATGGCTCAATTACTTCCTCCTCAATGACCATCCATCTTCTCGATTCCACCAATCGCTTGATCCTTACATTTGAGAATTCAAGTAAGTTA
Protein sequenceShow/hide protein sequence
MFLARLDLIGHLLNATSILAIIADDATVKFTPELSSMIASHRASRFDVLLKLPRHFFTSYSVILNHSSKISLHAFKSALLDGSITSSSMTIHLLDSTNRLILTFENSSKL