; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021471 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021471
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCOP9 signalosome complex subunit 1
Genome locationscaffold381:183263..185944
RNA-Seq ExpressionMS021471
SyntenyMS021471
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0008180 - COP9 signalosome (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000717 - Proteasome component (PCI) domain
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019585 - 26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1
IPR033008 - COP9 signalosome complex subunit 1
IPR036390 - Winged helix DNA-binding domain superfamily
IPR045135 - 26S proteasome regulatory subunit Rpn7, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002511799.1 COP9 signalosome complex subunit 1 [Ricinus communis]1.4e-8143.78Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ LL +AD C         TMQLEALR+AY+E+K G   +LF ++V+ I GRLGPNY +D  WC +V++  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG   +A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD + +A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
        ++ E    +  V++  D+A YGGLCALA+ ERT+L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE +ALI +NQIQA+ID+ +K+LYAR  D+RN  FQ+VLQ+ ++ +RD+ +MLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

XP_004133880.1 COP9 signalosome complex subunit 1 [Cucumis sativus]2.4e-8144.82Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ L+ +AD CG    E   TMQLEALR+AYDE+K G    LF ++V  I GRLGPNY +D  WC  V +  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD +  A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
           E   H+  V++  D+A YGGLCALAT +R++L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE + LI NNQIQA+ID+ +K+LYAR  D+RN  FQ+VLQS S+ +R++ SMLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

XP_008438090.1 PREDICTED: COP9 signalosome complex subunit 1 [Cucumis melo]6.4e-8245.08Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ L+ +AD CG    E  QTMQLEALR+AYDE+K G    LF ++V  I GRLGPNY +D  WC  V +  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD +  A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
           E   H+  V++  D+A YGGLCALAT +R++L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE + LI NNQIQA+ID+ +K+LYAR  D+RN  FQ+VLQS S+ +R++ SMLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

XP_022147407.1 COP9 signalosome complex subunit 1 [Momordica charantia]4.9e-8245.08Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ L+ +AD CG    E  Q+MQLEALR+AYDE+K G    LF ++V  I GRLGPNY +D  WC  V +  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG+   A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD +  A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
           E   HF  V++  D+A YGGLCALAT +RT+L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE + LI NNQIQA+ID+ +K+LYAR  D+RN  FQ+VLQ+ S+ +R++ SMLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

XP_024018226.1 COP9 signalosome complex subunit 1 [Morus notabilis]2.2e-8244.96Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ LL +AD CG       Q MQLEALR+AYDE+K G   +LF ++V+ I GRLGPNY +D  WC +V++  E+K   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEI-CKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFL
         Y   GDFY+ HG    A ++Y R++ +CT+        +  I  S E G  + V ++  KA ++   +LD +  A++RC AGLA L+ ++++ AA +FL
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEI-CKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFL

Query:  GISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIR
            E A H+  +++  D+A YGGLCALA+ +RT+L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR
Subjt:  GISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIR

Query:  QKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
         KALI    PFV+V L  +AN   T +  +EKE +ALI +NQIQA+ID+ +K+LYAR  D+RN  FQ+VLQ+ S+ +RD+ SMLL+A
Subjt:  QKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

TrEMBL top hitse value%identityAlignment
A0A0A0L4A8 PCI domain-containing protein1.2e-8144.82Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ L+ +AD CG    E   TMQLEALR+AYDE+K G    LF ++V  I GRLGPNY +D  WC  V +  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD +  A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
           E   H+  V++  D+A YGGLCALAT +R++L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE + LI NNQIQA+ID+ +K+LYAR  D+RN  FQ+VLQS S+ +R++ SMLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

A0A1S3AV75 COP9 signalosome complex subunit 13.1e-8245.08Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ L+ +AD CG    E  QTMQLEALR+AYDE+K G    LF ++V  I GRLGPNY +D  WC  V +  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD +  A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
           E   H+  V++  D+A YGGLCALAT +R++L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE + LI NNQIQA+ID+ +K+LYAR  D+RN  FQ+VLQS S+ +R++ SMLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

A0A2S0CU67 COP9 signalosome complex subunit1.2e-8144.04Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ LL ++D C          MQLEALR+AYDE+K G   +LF ++V+ I GRLGPNY +D  WC +V++  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD + IA++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
        ++ E    +  V++  D+A YGGLCALA+ ERT+L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE +ALI +NQIQA+ID+ +K+LYAR  D+RN  FQ+VLQ+ S+ +RD+ +MLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

A0A6J1D2A2 COP9 signalosome complex subunit 12.4e-8245.08Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ L+ +AD CG    E  Q+MQLEALR+AYDE+K G    LF ++V  I GRLGPNY +D  WC  V +  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG+   A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD +  A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
           E   HF  V++  D+A YGGLCALAT +RT+L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE + LI NNQIQA+ID+ +K+LYAR  D+RN  FQ+VLQ+ S+ +R++ SMLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

B9RDL0 Cop9 signalosome complex subunit, putative6.9e-8243.78Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN
        R K++ LL +AD C         TMQLEALR+AY+E+K G   +LF ++V+ I GRLGPNY +D  WC +V++  E++   L         N + E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEK--ILRRNRRCEFVNQLIERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+ HG   +A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++LD + +A++RC AGLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
        ++ E    +  V++  D+A YGGLCALA+ ERT+L   V++N +F+++L+    VRELI DFYSSHY SC  +L NL+  LLLDIH HD  E LYDQIR 
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +AN   T +  +EKE +ALI +NQIQA+ID+ +K+LYAR  D+RN  FQ+VLQ+ ++ +RD+ +MLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

SwissProt top hitse value%identityAlignment
P45432 COP9 signalosome complex subunit 12.7e-7541.19Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEKILR-RNRRCEFVNQLI-ERVRN
        R K+  LL +A+ CGG        +Q +ALR+AYDE+K G   +LF ++V  I  RLG  Y +D  WC +V++  E+K ++  N    +   LI E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEKILR-RNRRCEFVNQLI-ERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+  G    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++L+ +  A++RC +GLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
        ++ E    +  V++  DIA YGGLCALA+ +R++L   V++N +F+++L+    VRELI DFYSS Y SC ++L +L+  LLLDIH HD  + LYDQIR+
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +A+   T +  +EKE +ALI +NQIQA+ID+ +K+LYAR  D+RN  FQKVLQ  ++ +RD+ +MLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA

P97834 COP9 signalosome complex subunit 15.3e-3929.24Show/hide
Query:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISG-----RLGPNY---------EIDEDWCRSVNQFVEEKI--LRRNRRC
        ++  L  +ADRC          +++EAL++A   V+    V+++ +I   +S      +  P+           +D  W  +  +    K+  L  + + 
Subjt:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISG-----RLGPNY---------EIDEDWCRSVNQFVEEKI--LRRNRRC

Query:  EFVNQLIERVRNSYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVG---------IAQVRC
           N + E +R  +  +GD Y   G+   AL+ Y R++ +CTS        L  I  S    + S V+++  KA    +  +  G         + +++C
Subjt:  EFVNQLIERVRNSYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVG---------IAQVRC

Query:  TAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLRE
         AGLA L  ++++ AA  FL  S +    F  ++S  ++A YGGLCALAT +R +L   V+ +  F+ +L+    VR++IF FY S Y SC K LD +++
Subjt:  TAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLRE

Query:  WLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERDL
         LLLD++       LY QIR +ALI    P+V+  +  +A    T + A+E E   +I+   I A+ID+  K+LYAR  D+R+  F+K L    + +R  
Subjt:  WLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERDL

Query:  SSMLLKA
         +M+L+A
Subjt:  SSMLLKA

Q54QX3 COP9 signalosome complex subunit 18.2e-4832.9Show/hide
Query:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQ--FVEEKILRRNRRCEFVNQLIERVRNSY
        K+  L+ +AD C        + +++EA  +A  EV+    +EL+  I+    G L    E+D  +  ++++   ++   L ++      N + + +R + 
Subjt:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQ--FVEEKILRRNRRCEFVNQLIERVRNSY

Query:  ITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLGIS
          +G+FY+  G+   AL+ + R++ +CT+           I    +T + +   ++  KA E    LDNV  A++R   GL  L   R++ AA +F+   
Subjt:  ITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLGIS

Query:  REFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQKA
         E +  F  ++S  DIA YGGLCALAT +R +L   V+++  F++YL+    +RELI DFY++ Y SC K+LD ++  LLLDIH +   E LY +IR KA
Subjt:  REFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQKA

Query:  LILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERDLSSMLLK
        L+    P+ +V +  +A+   T +  +EKE   LI+ N+IQA+ID+ +K LYARK D+R   F+K +Q  SD +   +S+LL+
Subjt:  LILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERDLSSMLLK

Q6NRT5 COP9 signalosome complex subunit 12.2e-4029.66Show/hide
Query:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMIS---------------GRLGPNYEIDEDWCRSVNQFVEEKI--LRRNRR
        ++  L  +ADRC          +++EAL++A   V+    V+++  I   ++               G + P   +D  W  +  +    K+  L  + +
Subjt:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMIS---------------GRLGPNYEIDEDWCRSVNQFVEEKI--LRRNRR

Query:  CEFVNQLIERVRNSYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVG---------IAQVR
            N + E +R  +  +GD Y   G+   AL+ Y R++ +CTS        L  I  S    + S V+++  KA    +  +  G         + +++
Subjt:  CEFVNQLIERVRNSYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVG---------IAQVR

Query:  CTAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLR
        C AGLA L  ++++ AA  FL  S +    F  ++S  ++A YGGLCALAT +R +L   V+ +  F+ +L+    VR++IF FY S Y SC K LD ++
Subjt:  CTAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLR

Query:  EWLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERD
        + LLLD++       LY QIR +ALI    P+V+  +  +A    T + A+E E   LI+   I A+ID+  K+LYAR  D+R+  F+K LQ   + +R 
Subjt:  EWLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERD

Query:  LSSMLLKA
          +M+L+A
Subjt:  LSSMLLKA

Q99LD4 COP9 signalosome complex subunit 12.4e-3929.48Show/hide
Query:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISG-----RLGPNY---------EIDEDWCRSVNQFVEEKI--LRRNRRC
        ++  L  +ADRC          +++EAL++A   V+    V+++ +I   +S      +  P+           +D  W  +  +    K+  L  + + 
Subjt:  KVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISG-----RLGPNY---------EIDEDWCRSVNQFVEEKI--LRRNRRC

Query:  EFVNQLIERVRNSYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVG---------IAQVRC
           N + E +R  +  +GD Y   G+   AL+ Y R++ +CTS        L  I  S    + S V+++  KA    +  +  G         + +++C
Subjt:  EFVNQLIERVRNSYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVG---------IAQVRC

Query:  TAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLRE
         AGLA L  ++++ AA  FL  S +    F  ++S  ++A YGGLCALAT +R +L   V+ +  F+ +L+    VR++IF FY S Y SC K LD +++
Subjt:  TAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLRE

Query:  WLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERDL
         LLLD++       LY QIR +ALI    P+V+  +  +A    T + A+E E   LI+   I A+ID+  K+LYAR  D+R+  F+K L    + +R  
Subjt:  WLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYARK-DRRNVIFQKVLQSCSDLERDL

Query:  SSMLLKA
         +M+L+A
Subjt:  SSMLLKA

Arabidopsis top hitse value%identityAlignment
AT3G12850.1 COP9 signalosome complex-related / CSN complex-related3.6e-0644.44Show/hide
Query:  MQLEALRLAYDEVK---LGREVELFTKIVEMISGRLGPNYEIDEDW-CRSVNQFVEEKILRRN
        ++LEALRLAYD ++   +  ++ LFT I E I GRLG  Y +DE W     N FV++  + RN
Subjt:  MQLEALRLAYDEVK---LGREVELFTKIVEMISGRLGPNYEIDEDW-CRSVNQFVEEKILRRN

AT3G61140.1 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain1.9e-7641.19Show/hide
Query:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEKILR-RNRRCEFVNQLI-ERVRN
        R K+  LL +A+ CGG        +Q +ALR+AYDE+K G   +LF ++V  I  RLG  Y +D  WC +V++  E+K ++  N    +   LI E +R 
Subjt:  RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEKILR-RNRRCEFVNQLI-ERVRN

Query:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG
         Y   GDFY+  G    A + Y R++ +CT+        +  I  S E G  + V ++  KA +  ++L+ +  A++RC +GLA L+ ++++ AA +FL 
Subjt:  SYITIGDFYFTHGEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLG

Query:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ
        ++ E    +  V++  DIA YGGLCALA+ +R++L   V++N +F+++L+    VRELI DFYSS Y SC ++L +L+  LLLDIH HD  + LYDQIR+
Subjt:  ISREFAYHFFGVMSAHDIAAYGGLCALATLERTDL---VMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQ

Query:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA
        KALI    PFV+V L  +A+   T +  +EKE +ALI +NQIQA+ID+ +K+LYAR  D+RN  FQKVLQ  ++ +RD+ +MLL+A
Subjt:  KALILCIQPFVTVHLETLANILGTDIEAMEKEHKALIINNQIQAKIDAIDKVLYAR-KDRRNVIFQKVLQSCSDLERDLSSMLLKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGATTCAAGGTCAGCCACCTCCTATCTGTCGCCGATCGCTGCGGCGGCGGCGACGATGAACGGCGGCAGACGATGCAACTGGAGGCGCTTCGGTTGGCCTACGACGAGGT
TAAATTGGGACGTGAAGTGGAGCTGTTCACCAAGATTGTTGAGATGATTTCAGGGAGATTGGGCCCTAATTACGAGATCGATGAAGATTGGTGCCGTTCGGTGAATCAAT
TTGTGGAGGAGAAGATTTTGCGAAGAAATAGGAGGTGTGAATTTGTGAATCAGTTAATCGAAAGAGTAAGAAATTCATACATCACCATTGGAGATTTCTATTTCACCCAC
GGCGAATTTCCAAAAGCTCTTGAATATTATTGGAGATCCCAATTTTTCTGCACCAGCCCAAACACGAACGCTGAGACATTTTTGCGTTTCATTCACACCTCGTTTGAGAC
GGGCCACTTATCGCTGGTCATAGCATTCGCTGAAAAGGCTTTAGAAATATGTAAGTCTCTTGACAATGTCGGTATTGCACAAGTGCGCTGCACTGCGGGATTGGCTTTCT
TGAAGACCCAACGCTTTAGAGATGCTGCTCTTCAGTTCTTGGGAATAAGTAGAGAGTTTGCATACCATTTTTTTGGAGTGATGAGTGCTCATGATATTGCAGCCTATGGC
GGGCTATGTGCACTTGCAACTTTGGAACGAACAGATTTAGTTATGGAAAATGATGATTTCCAGTCCTATTTGGATTCAGCCATTGGAGTCAGGGAGCTCATATTTGATTT
CTATTCAAGCCATTATGTTTCATGTTTCAAGCACCTTGATAACCTCAGAGAATGGTTGCTGCTAGACATACATTTCCACGATAAGTTTGAGAATTTATATGATCAAATCA
GACAAAAGGCTCTCATCCTCTGTATTCAGCCATTTGTGACTGTCCATTTAGAGACACTGGCAAATATTCTTGGCACAGACATTGAAGCTATGGAAAAAGAGCATAAAGCT
TTGATAATCAATAACCAAATCCAGGCTAAAATCGACGCCATCGATAAAGTTCTATATGCTCGAAAAGATCGAAGAAATGTAATTTTTCAAAAGGTCTTGCAAAGTTGTAG
TGATCTTGAACGTGATCTTAGCTCTATGTTGCTGAAAGCA
mRNA sequenceShow/hide mRNA sequence
CGATTCAAGGTCAGCCACCTCCTATCTGTCGCCGATCGCTGCGGCGGCGGCGACGATGAACGGCGGCAGACGATGCAACTGGAGGCGCTTCGGTTGGCCTACGACGAGGT
TAAATTGGGACGTGAAGTGGAGCTGTTCACCAAGATTGTTGAGATGATTTCAGGGAGATTGGGCCCTAATTACGAGATCGATGAAGATTGGTGCCGTTCGGTGAATCAAT
TTGTGGAGGAGAAGATTTTGCGAAGAAATAGGAGGTGTGAATTTGTGAATCAGTTAATCGAAAGAGTAAGAAATTCATACATCACCATTGGAGATTTCTATTTCACCCAC
GGCGAATTTCCAAAAGCTCTTGAATATTATTGGAGATCCCAATTTTTCTGCACCAGCCCAAACACGAACGCTGAGACATTTTTGCGTTTCATTCACACCTCGTTTGAGAC
GGGCCACTTATCGCTGGTCATAGCATTCGCTGAAAAGGCTTTAGAAATATGTAAGTCTCTTGACAATGTCGGTATTGCACAAGTGCGCTGCACTGCGGGATTGGCTTTCT
TGAAGACCCAACGCTTTAGAGATGCTGCTCTTCAGTTCTTGGGAATAAGTAGAGAGTTTGCATACCATTTTTTTGGAGTGATGAGTGCTCATGATATTGCAGCCTATGGC
GGGCTATGTGCACTTGCAACTTTGGAACGAACAGATTTAGTTATGGAAAATGATGATTTCCAGTCCTATTTGGATTCAGCCATTGGAGTCAGGGAGCTCATATTTGATTT
CTATTCAAGCCATTATGTTTCATGTTTCAAGCACCTTGATAACCTCAGAGAATGGTTGCTGCTAGACATACATTTCCACGATAAGTTTGAGAATTTATATGATCAAATCA
GACAAAAGGCTCTCATCCTCTGTATTCAGCCATTTGTGACTGTCCATTTAGAGACACTGGCAAATATTCTTGGCACAGACATTGAAGCTATGGAAAAAGAGCATAAAGCT
TTGATAATCAATAACCAAATCCAGGCTAAAATCGACGCCATCGATAAAGTTCTATATGCTCGAAAAGATCGAAGAAATGTAATTTTTCAAAAGGTCTTGCAAAGTTGTAG
TGATCTTGAACGTGATCTTAGCTCTATGTTGCTGAAAGCA
Protein sequenceShow/hide protein sequence
RFKVSHLLSVADRCGGGDDERRQTMQLEALRLAYDEVKLGREVELFTKIVEMISGRLGPNYEIDEDWCRSVNQFVEEKILRRNRRCEFVNQLIERVRNSYITIGDFYFTH
GEFPKALEYYWRSQFFCTSPNTNAETFLRFIHTSFETGHLSLVIAFAEKALEICKSLDNVGIAQVRCTAGLAFLKTQRFRDAALQFLGISREFAYHFFGVMSAHDIAAYG
GLCALATLERTDLVMENDDFQSYLDSAIGVRELIFDFYSSHYVSCFKHLDNLREWLLLDIHFHDKFENLYDQIRQKALILCIQPFVTVHLETLANILGTDIEAMEKEHKA
LIINNQIQAKIDAIDKVLYARKDRRNVIFQKVLQSCSDLERDLSSMLLKA