; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021495 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021495
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP28
Genome locationscaffold208:86300..87918
RNA-Seq ExpressionMS021495
SyntenyMS021495
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579265.1 F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]8.6e-12070.12Show/hide
Query:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI
        MS N++ PN  A       GV I AGPPH+A FLVLSYLPL ELLSM AVCVSLRDAVE D+LPW H++VD  LSSRL+D IL RI RKADGRLRTLALI
Subjt:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI

Query:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQ--RLLCHEYIDRSK
         CFKISDS LH+VV  NPLL KLYVPGCT LTPEGV+RAV+TLSQHSHNL S+MIGGIYNIENEHLEVL+YHL  NRS+QQQQQQQ  RL  HE+I+ SK
Subjt:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQ--RLLCHEYIDRSK

Query:  LLSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRN
        LL +EY  MIDV++CPKC EI RVYDCSRE CKIKQE K  A+CR C+GC+ RCEECGGCVD    E EEAVCA  LCTSCWL+LPKCNHCN+PYC R  
Subjt:  LLSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRN

Query:  RCDEPYCMLHSPLVRNSAPGFVCEVCLE
             +C     +V ++A GFVCEVC+E
Subjt:  RCDEPYCMLHSPLVRNSAPGFVCEVCLE

XP_022146321.1 F-box protein SKIP28 [Momordica charantia]1.4e-18399.38Show/hide
Query:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS
        MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS
Subjt:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS

Query:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQP
        DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS  QQQQQQRLLCHEYIDRSKLLSDEYQP
Subjt:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQP

Query:  MIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCM
        MIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCM
Subjt:  MIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCM

Query:  LHSPLVRNSAPGFVCEVCLEM
        LHSPLVRNSAPGFVCEVCLEM
Subjt:  LHSPLVRNSAPGFVCEVCLEM

XP_022939676.1 F-box protein SKIP28 [Cucurbita moschata]1.6e-11870.03Show/hide
Query:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI
        MS N + PN  A       GV I AGPPH+A FLVLSYLPL ELLSM AVCVSLRDAV  D+LPW H++VD  LSSRL+D IL RI RKADGRLRTLALI
Subjt:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI

Query:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQ-RLLCHEYIDRSKL
         CFKISDS LH+VV  NPLL KLYVPGCT LTPEGV+RAV+TLSQHSHNL S+MIGGIYNIENEHLEVL+YHL  NRSQQQQQQQQ RL  HE+I+ SKL
Subjt:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQ-RLLCHEYIDRSKL

Query:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR
        L ++Y  MIDV++CPKC EI RVYDCSRE CKIKQE K  A+CR C+GC+ RCEECGGCVD    E EEAVCA  LCTSCWL+LPKCNHCN+PYC R   
Subjt:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR

Query:  CDEPYCMLHSPLVRNSAPGFVCEVCLE
            +C     +  +SA GFVCEVC+E
Subjt:  CDEPYCMLHSPLVRNSAPGFVCEVCLE

XP_023551551.1 F-box protein SKIP28-like [Cucurbita pepo subsp. pepo]2.1e-11869.11Show/hide
Query:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI
        MS N++ PN  A       GV I AGPPH+A FLVLSYLPL E+LSM AVCVSLRDAVE D+LPW H+ VD  LSSRL+D IL+RI RKADGRLRTLALI
Subjt:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI

Query:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS-QQQQQQQQRLLCHEYIDRSKL
         CFKISDS LH+VV  NPLL KLYVPGCT LTPEGV+RAV+TLSQHSHNL S+MIGGIYNIENEHLEVL+YHL  N S QQQQQQQQR L H+YI+  KL
Subjt:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS-QQQQQQQQRLLCHEYIDRSKL

Query:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR
        L +EY  MIDV++CPKC EI +VYDCSRE CKIKQE    A+CR C+GC+ RCEECGGCVD    E EEAVCA  LCTSCWL+LPKCNHCN+PYC R  +
Subjt:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR

Query:  CDEPYCMLHSPLVRNSAPGFVCEVCLE
                   +V +SA GFVCEVC+E
Subjt:  CDEPYCMLHSPLVRNSAPGFVCEVCLE

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]2.2e-12372.48Show/hide
Query:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI
        MS NQE  NPAAA      GV I+AGPPH+A FLVLSYLPL ELLSMS+VCVSLRDAVE D+LPW HI+VD RLSSRLSD  L RI RKA GRLRTLALI
Subjt:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI

Query:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS-QQQQQQQQRLLCHEYIDRSKL
         CFKISDSG H+VV +NPLL KLYVPGCT LTP GVVRAVKTLSQHSHNLKS+MIGGIYNIENEHLEVL+ HL  NRS QQQ+++QQ  L  E+IDRSKL
Subjt:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS-QQQQQQQQRLLCHEYIDRSKL

Query:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR
        LS+E+QP+IDVQICPKC+EI  VYDCSRE CKIKQE +L ADCR C  CI RCEECGGCVD  D E+EEAVCA  LC+SCWL+LPKCNHCN+PYC R   
Subjt:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR

Query:  CDEPYCMLHSPLVRNSAPGFVCEVCLE
                H   V +S  GFVCE+CLE
Subjt:  CDEPYCMLHSPLVRNSAPGFVCEVCLE

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein3.6e-11668.01Show/hide
Query:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS
        MS NQE PNPA+     +AGPPH+A F V++YLPL ELLS+SAVCVSLRDAVE D+LPW HI+VDGRLSSRLSD  L RI RKA GRLRTLALI CFKIS
Subjt:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS

Query:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS--QQQQQQQQRLLCHEYIDRSKLLSDEY
        DSGLH+VV  NPLL KLYVPGCT LTPEGVVRAVKTLSQ SHNLK++MIGGIYNIEN+HLEVL+ HL  NRS  +QQ+ +Q   L HE++DR +LLS ++
Subjt:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS--QQQQQQQQRLLCHEYIDRSKLLSDEY

Query:  QPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPY
         P+IDVQICPKC +I  VYDCSRE CKIKQ + L ADCR C  CI RCEECGGCVD  D E+EEA+C+  LC+SCW +LPKCNHCN+PYC R        
Subjt:  QPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPY

Query:  CMLHSPLVRNSAPGFVCEVCLE
           H   V +S  GFVCE+CLE
Subjt:  CMLHSPLVRNSAPGFVCEVCLE

A0A5A7TYB5 F-box protein SKIP28 isoform X14.0e-11567.7Show/hide
Query:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS
        MS NQE PNPAA     +AGPPH+A F V+SYL L ELLSMSAVCVSLRDAVE D+LPW HI+VDGRLSSRLSD  L RI RKA GRLRTLALI CFKIS
Subjt:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS

Query:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRL--LCHEYIDRSKLLSDEY
        DSGLH+VV  NPLL KLYVPGCT LTP GVVRAVKT SQHSHNLK++MIGGIYNIEN HLEVL+ HL  NRSQ +QQ+ +++  L HE++DR  LLS+++
Subjt:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRL--LCHEYIDRSKLLSDEY

Query:  QPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPY
         P+IDVQICPKC +I  VYDCSRE CKIKQ + L ADCR C  C+ RCEECGGCVD    E+EEA+C   +C+SCWL+LPKCNHCN+PYC R        
Subjt:  QPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPY

Query:  CMLHSPLVRNSAPGFVCEVCLE
           H   V +S  GFVCE+CLE
Subjt:  CMLHSPLVRNSAPGFVCEVCLE

A0A6J1CZ11 F-box protein SKIP286.9e-18499.38Show/hide
Query:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS
        MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS
Subjt:  MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKIS

Query:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQP
        DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS  QQQQQQRLLCHEYIDRSKLLSDEYQP
Subjt:  DSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQP

Query:  MIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCM
        MIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCM
Subjt:  MIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCM

Query:  LHSPLVRNSAPGFVCEVCLEM
        LHSPLVRNSAPGFVCEVCLEM
Subjt:  LHSPLVRNSAPGFVCEVCLEM

A0A6J1FGL5 F-box protein SKIP287.8e-11970.03Show/hide
Query:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI
        MS N + PN  A       GV I AGPPH+A FLVLSYLPL ELLSM AVCVSLRDAV  D+LPW H++VD  LSSRL+D IL RI RKADGRLRTLALI
Subjt:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI

Query:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQ-RLLCHEYIDRSKL
         CFKISDS LH+VV  NPLL KLYVPGCT LTPEGV+RAV+TLSQHSHNL S+MIGGIYNIENEHLEVL+YHL  NRSQQQQQQQQ RL  HE+I+ SKL
Subjt:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQ-RLLCHEYIDRSKL

Query:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR
        L ++Y  MIDV++CPKC EI RVYDCSRE CKIKQE K  A+CR C+GC+ RCEECGGCVD    E EEAVCA  LCTSCWL+LPKCNHCN+PYC R   
Subjt:  LSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNR

Query:  CDEPYCMLHSPLVRNSAPGFVCEVCLE
            +C     +  +SA GFVCEVC+E
Subjt:  CDEPYCMLHSPLVRNSAPGFVCEVCLE

A0A6J1IEZ1 F-box protein SKIP281.9e-11768.9Show/hide
Query:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI
        MS N++ PN  A       GV I AGPPH+A FLVLSYLPL ELLSM AVCVSLRDAVE D+LPW H++VD  LSSRL+D IL RI RKADGRLRTLALI
Subjt:  MSSNQETPNPAAA------GVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALI

Query:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS--QQQQQQQQRLLCHEYIDRSK
         CFKISDS LH+VV  NPLL KLYVPGCT LTPEGV+RAV+TLSQHSHNL S+MIGGIYNIENEHLEVL+Y+L  NRS  QQQQQQQQR L H+ I+ SK
Subjt:  KCFKISDSGLHKVVARNPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRS--QQQQQQQQRLLCHEYIDRSK

Query:  LLSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRN
        LL +E   MIDV++CPKC E+ RVYDCSRE CKIKQE K  A+CR C+GC+ RCEECGGCVD    E EEAVC   LCTSCWL+LPKCNHCNKPYC R  
Subjt:  LLSDEYQPMIDVQICPKCNEILRVYDCSRESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRN

Query:  RCDEPYCMLHSPLVRNSAPGFVCEVCLE
        +           +  +SA GFVCEVC+E
Subjt:  RCDEPYCMLHSPLVRNSAPGFVCEVCLE

SwissProt top hitse value%identityAlignment
Q9LK24 F-box protein At3g272905.0e-3035.43Show/hide
Query:  GPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHI-LVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLY
        G  H AF LVL YL L E+L++  VC SLRD+V ++   W  I L D  L  R++D+ L ++ R+A G +R L L  C  I+D GL +V+A NP L KL 
Subjt:  GPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHI-LVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLY

Query:  VPGCTRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVY
        V GC RL+  G+V  ++ L S +   +KS++ GG      E  + L   L  +     Q++++R     Y         E   + D++ICP C +   V+
Subjt:  VPGCTRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVY

Query:  DCSRESCKIK-QEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLC
        DC  ++C +K Q    ++ CRAC  CI+RC ECG C+++ + +      +C +C
Subjt:  DCSRESCKIK-QEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLC

Q9LU91 F-box protein SKIP142.8e-3334.11Show/hide
Query:  HQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPGC
        H A    L +L   +LLS+S VC SL   V  D L W HI +   L+ +++++ L  +  +A G ++ L ++ C +I+D  L +VVARN  + K+ VPGC
Subjt:  HQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPGC

Query:  TRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR
        TR+T +G++  ++ L S     +K + + G++ +  +H + L   L+I+   +Q  Q+ R     Y      +S +    +D+++CPKC     VYDC  
Subjt:  TRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR

Query:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPK
        E CK K+  K   +CRAC+ CI+RC  CG C+ + +Y  EE  C   LC  C    PK
Subjt:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPK

Q9ZU90 F-box protein SKIP287.4e-5037.46Show/hide
Query:  HQAFFLVLSYL-PLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPG
        H+   +VL YL  L ELLSM  V  SLRDA+  +   W  ++++  LSSRL+D IL     K+ G+L+TL L +C  +++ GL +VV  NPL+ K+ VPG
Subjt:  HQAFFLVLSYL-PLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPG

Query:  CTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR
        C+ LTPEG++  V++LS+++H L+++ I G+     +HL  L  +L                               +  ID+++CPKC+E+  +  CSR
Subjt:  CTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR

Query:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACS--LCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCMLHSPLVRNSAPGFVCEVC
        ESC  KQ       CR C  CI RC EC  C+  +D E +EA C     LC  CWL LPKC  CNKPYC   +       +  +     S P F CE C
Subjt:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACS--LCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCMLHSPLVRNSAPGFVCEVC

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein5.3e-5137.46Show/hide
Query:  HQAFFLVLSYL-PLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPG
        H+   +VL YL  L ELLSM  V  SLRDA+  +   W  ++++  LSSRL+D IL     K+ G+L+TL L +C  +++ GL +VV  NPL+ K+ VPG
Subjt:  HQAFFLVLSYL-PLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPG

Query:  CTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR
        C+ LTPEG++  V++LS+++H L+++ I G+     +HL  L  +L                               +  ID+++CPKC+E+  +  CSR
Subjt:  CTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR

Query:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACS--LCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCMLHSPLVRNSAPGFVCEVC
        ESC  KQ       CR C  CI RC EC  C+  +D E +EA C     LC  CWL LPKC  CNKPYC   +       +  +     S P F CE C
Subjt:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACS--LCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCMLHSPLVRNSAPGFVCEVC

AT3G26000.1 Ribonuclease inhibitor2.0e-3434.11Show/hide
Query:  HQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPGC
        H A    L +L   +LLS+S VC SL   V  D L W HI +   L+ +++++ L  +  +A G ++ L ++ C +I+D  L +VVARN  + K+ VPGC
Subjt:  HQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLYVPGC

Query:  TRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR
        TR+T +G++  ++ L S     +K + + G++ +  +H + L   L+I+   +Q  Q+ R     Y      +S +    +D+++CPKC     VYDC  
Subjt:  TRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSR

Query:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPK
        E CK K+  K   +CRAC+ CI+RC  CG C+ + +Y  EE  C   LC  C    PK
Subjt:  ESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPK

AT3G27290.1 RNI-like superfamily protein3.6e-3135.43Show/hide
Query:  GPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHI-LVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLY
        G  H AF LVL YL L E+L++  VC SLRD+V ++   W  I L D  L  R++D+ L ++ R+A G +R L L  C  I+D GL +V+A NP L KL 
Subjt:  GPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHI-LVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLLCKLY

Query:  VPGCTRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVY
        V GC RL+  G+V  ++ L S +   +KS++ GG      E  + L   L  +     Q++++R     Y         E   + D++ICP C +   V+
Subjt:  VPGCTRLTPEGVVRAVKTL-SQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVY

Query:  DCSRESCKIK-QEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLC
        DC  ++C +K Q    ++ CRAC  CI+RC ECG C+++ + +      +C +C
Subjt:  DCSRESCKIK-QEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGTAACCAGGAGACCCCGAATCCGGCAGCCGCCGGTGTTCCAATCGACGCAGGGCCACCGCACCAGGCCTTCTTTCTTGTATTGAGTTATCTTCCTCTTCTCGA
GCTTCTTTCCATGAGCGCGGTCTGCGTTTCGCTCAGAGACGCTGTGGAACGCGACTTGTTGCCCTGGCCCCACATCCTCGTCGATGGACGCTTGAGCTCCCGCCTCTCTG
ATAAGATTCTGAAGAGAATCGTCCGGAAGGCCGATGGTCGCCTTAGAACTCTGGCTTTGATCAAATGTTTTAAGATTTCAGATTCCGGACTTCACAAAGTCGTTGCGAGG
AATCCTCTCCTCTGCAAGCTTTATGTACCTGGATGCACAAGGTTGACCCCTGAGGGAGTGGTCAGGGCAGTGAAGACACTGTCTCAACATTCCCACAACTTGAAGAGCAT
AATGATCGGAGGCATTTACAACATAGAGAATGAACACCTGGAAGTCCTCCAATACCATCTTCACATAAACCGATCGCAGCAGCAGCAGCAGCAACAACAGCGTCTCCTAT
GCCATGAGTATATTGACCGATCGAAGTTGTTGAGTGATGAATACCAGCCGATGATTGATGTACAAATCTGCCCAAAGTGCAATGAGATTTTGAGAGTTTACGACTGCTCA
AGGGAGAGCTGCAAGATAAAGCAAGAGGATAAGTTGCAGGCAGACTGCCGGGCCTGTACTGGTTGCATTAAGAGGTGTGAAGAATGTGGCGGATGTGTCGACGAAGCCGA
TTACGAAGTAGAAGAGGCTGTTTGTGCATGTTCATTGTGTACAAGTTGCTGGCTCCGACTTCCCAAATGCAACCATTGTAATAAGCCATATTGCCTGCGACGCAACCGTT
GTGATGAGCCATATTGCATGCTACACAGTCCTTTGGTACGTAACTCTGCTCCTGGTTTTGTTTGTGAAGTTTGTCTTGAAATG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGTAACCAGGAGACCCCGAATCCGGCAGCCGCCGGTGTTCCAATCGACGCAGGGCCACCGCACCAGGCCTTCTTTCTTGTATTGAGTTATCTTCCTCTTCTCGA
GCTTCTTTCCATGAGCGCGGTCTGCGTTTCGCTCAGAGACGCTGTGGAACGCGACTTGTTGCCCTGGCCCCACATCCTCGTCGATGGACGCTTGAGCTCCCGCCTCTCTG
ATAAGATTCTGAAGAGAATCGTCCGGAAGGCCGATGGTCGCCTTAGAACTCTGGCTTTGATCAAATGTTTTAAGATTTCAGATTCCGGACTTCACAAAGTCGTTGCGAGG
AATCCTCTCCTCTGCAAGCTTTATGTACCTGGATGCACAAGGTTGACCCCTGAGGGAGTGGTCAGGGCAGTGAAGACACTGTCTCAACATTCCCACAACTTGAAGAGCAT
AATGATCGGAGGCATTTACAACATAGAGAATGAACACCTGGAAGTCCTCCAATACCATCTTCACATAAACCGATCGCAGCAGCAGCAGCAGCAACAACAGCGTCTCCTAT
GCCATGAGTATATTGACCGATCGAAGTTGTTGAGTGATGAATACCAGCCGATGATTGATGTACAAATCTGCCCAAAGTGCAATGAGATTTTGAGAGTTTACGACTGCTCA
AGGGAGAGCTGCAAGATAAAGCAAGAGGATAAGTTGCAGGCAGACTGCCGGGCCTGTACTGGTTGCATTAAGAGGTGTGAAGAATGTGGCGGATGTGTCGACGAAGCCGA
TTACGAAGTAGAAGAGGCTGTTTGTGCATGTTCATTGTGTACAAGTTGCTGGCTCCGACTTCCCAAATGCAACCATTGTAATAAGCCATATTGCCTGCGACGCAACCGTT
GTGATGAGCCATATTGCATGCTACACAGTCCTTTGGTACGTAACTCTGCTCCTGGTTTTGTTTGTGAAGTTTGTCTTGAAATG
Protein sequenceShow/hide protein sequence
MSSNQETPNPAAAGVPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVERDLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVAR
NPLLCKLYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIENEHLEVLQYHLHINRSQQQQQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCS
RESCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNHCNKPYCLRRNRCDEPYCMLHSPLVRNSAPGFVCEVCLEM