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MS021502 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021502
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c biogenesis FC (Mitochondrion)
Genome locationscaffold208:180544..180651
RNA-Seq ExpressionMS021502
SyntenyMS021502
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034869.1 cytochrome c biogenesis FC [Cucumis melo var. makuwa]9.6e-0477.14Show/hide
Query:  LIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        L FSREAKLE +EQMVQLNNFF F   MVVPRG A
Subjt:  LIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
RDY14275.1 Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein, partial [Mucuna pruriens]2.5e-0477.78Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIFSREAKLE +EQMVQL+NFF F   MVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
TXG46244.1 hypothetical protein EZV62_028275 [Acer yangbiense]3.0e-0580.56Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIFSREAKLE +EQMVQL+NFF F  FMVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
XP_015584111.1 uncharacterized protein LOC107262518 [Ricinus communis]9.6e-0475Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RL FSREAKLE +EQMVQL+NFF F   MVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
XP_022933171.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111440024 [Cucurbita moschata]5.1e-0580.56Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIF REAKLEHLE+MVQLNNFF F   MVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
TrEMBL top hitse value%identityAlignment
A0A371IH26 Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein (Fragment)1.2e-0477.78Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIFSREAKLE +EQMVQL+NFF F   MVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
A0A5A7T0J2 Cytochrome c biogenesis FC (Mitochondrion)4.6e-0477.14Show/hide
Query:  LIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        L FSREAKLE +EQMVQLNNFF F   MVVPRG A
Subjt:  LIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
A0A5C7GN87 CcmF_C domain-containing protein1.4e-0580.56Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIFSREAKLE +EQMVQL+NFF F  FMVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
A0A5C7GQ48 Uncharacterized protein1.4e-0580.56Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIFSREAKLE +EQMVQL+NFF F  FMVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
A0A6J1EYD2 LOW QUALITY PROTEIN: uncharacterized protein LOC1114400242.5e-0580.56Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RLIF REAKLEHLE+MVQLNNFF F   MVVPRG A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07815.1 BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1)1.5e-0772.22Show/hide
Query:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA
        RL+F REAKLE +EQMVQL+NFF F  FMVVP G A
Subjt:  RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCTCATCTTCTCTAGAGAAGCGAAACTCGAACATCTCGAGCAGATGGTCCAACTAAATAACTTTTTTCTTTTTCATTACTTCATGGTCGTGCCTCGTGGCATGGCA
mRNA sequenceShow/hide mRNA sequence
CGTCTCATCTTCTCTAGAGAAGCGAAACTCGAACATCTCGAGCAGATGGTCCAACTAAATAACTTTTTTCTTTTTCATTACTTCATGGTCGTGCCTCGTGGCATGGCA
Protein sequenceShow/hide protein sequence
RLIFSREAKLEHLEQMVQLNNFFLFHYFMVVPRGMA