; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021506 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021506
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2
Genome locationscaffold208:230178..231330
RNA-Seq ExpressionMS021506
SyntenyMS021506
Gene Ontology termsGO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR019654 - NAD(P)H-quinone oxidoreductase subunit L


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046329.1 NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa]1.6e-8178Show/hide
Query:  MRCCLGLG-LHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL
        M CC G+G LHIP+ALPSLSSS++LFPSLSS  KL     LPSNS P N   V SI  EDPI  + +KK SLA Q+AA LAT+GEPA+AVTGDNNHEVPL
Subjt:  MRCCLGLG-LHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL

Query:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        +W+L QLG VGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+TP+DPSQ+KNAYLKYPFAKPEDYDW
Subjt:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

XP_004150114.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sativus]1.1e-8076.5Show/hide
Query:  MRCC-LGLGLHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL
        M+CC +GL LHIP+ALPSLSSS++LFPSL S  KL     LPSNS P N   V SI  EDPI  +H+KK SLA  +AA LAT+GEPA+AVTG+NNHEVPL
Subjt:  MRCC-LGLGLHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL

Query:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        +W+L QLG++GFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+TP+DPS++KNAYLKYPFAKPEDYDW
Subjt:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

XP_022159257.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Momordica charantia]2.8e-10598.98Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKN--AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI
        MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKN  AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKN--AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI

Query:  LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Subjt:  LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

XP_022159258.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 [Momordica charantia]8.6e-107100Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
        MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT

Query:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Subjt:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

XP_038875378.1 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida]5.1e-8379.19Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQ--KLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI
        M C   LGLHIP+ALPSLSSS++LFPSLSS  KL    LPSNS   N   V SI EDP+  +HQKK SLA Q+AA+LAT+GE ANAVTG+NNHEVPL+WI
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQ--KLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI

Query:  LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        L QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+TP++PSQ+KNAYLKYPFAKPEDYDW
Subjt:  LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

TrEMBL top hitse value%identityAlignment
A0A0A0KSV9 Uncharacterized protein5.1e-8176.5Show/hide
Query:  MRCC-LGLGLHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL
        M+CC +GL LHIP+ALPSLSSS++LFPSL S  KL     LPSNS P N   V SI  EDPI  +H+KK SLA  +AA LAT+GEPA+AVTG+NNHEVPL
Subjt:  MRCC-LGLGLHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL

Query:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        +W+L QLG++GFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+TP+DPS++KNAYLKYPFAKPEDYDW
Subjt:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

A0A5D3E3M5 NAD(P)H-quinone oxidoreductase subunit L7.9e-8278Show/hide
Query:  MRCCLGLG-LHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL
        M CC G+G LHIP+ALPSLSSS++LFPSLSS  KL     LPSNS P N   V SI  EDPI  + +KK SLA Q+AA LAT+GEPA+AVTGDNNHEVPL
Subjt:  MRCCLGLG-LHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPL

Query:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        +W+L QLG VGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+TP+DPSQ+KNAYLKYPFAKPEDYDW
Subjt:  SWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

A0A6J1DYB3 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X24.2e-107100Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
        MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT

Query:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Subjt:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

A0A6J1DZB7 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X11.3e-10598.98Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKN--AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI
        MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKN  AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKN--AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWI

Query:  LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Subjt:  LTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

A0A6J1GNR4 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X11.3e-7976.92Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
        M C   LGLHIP+ALPSLSSS+++ P LS+  KL KLPSN T  +   VA I EDPI  + QKK SL+ Q AALLAT+ EPA AVTGDNNHEVPL+WILT
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT

Query:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
        QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVFL FPGIL+WAPFLNFRK PRDPS+KYPW+TP++PSQ+KN YLKYPFAKPEDYDW
Subjt:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

SwissProt top hitse value%identityAlignment
B0C6G0 NAD(P)H-quinone oxidoreductase subunit L2.0e-0543.75Show/hide
Query:  ILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPR
        ++  LG++G  Y LV P I   +L+ RWY  + LE    +  VF FFP +L+ +PFLNFR  PR
Subjt:  ILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPR

Q10W93 NAD(P)H-quinone oxidoreductase subunit L3.1e-0651.02Show/hide
Query:  YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR
        YFLV P I+  +L+ RWY  + +E    +  +FLFFPG+LV +PFLNFR
Subjt:  YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR

Q7U620 NAD(P)H-quinone oxidoreductase subunit L2.3e-0643.33Show/hide
Query:  ILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR
        ++    ++G  Y LV P  +  W+  RW R   +E  L +  VFLFFPG++V+APFLNFR
Subjt:  ILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR

Q8YMW5 NAD(P)H-quinone oxidoreductase subunit L1.2e-0545.28Show/hide
Query:  YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPR
        Y LV P  ++ +L++RWY  + +E    +  VFLFFPG+LV +PF+N R  PR
Subjt:  YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPR

Q9CAC5 NAD(P)H-quinone oxidoreductase subunit L, chloroplastic3.2e-4853.61Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
        M  C  LGL+ P ALPSLS       S   I+   K P+++  +N N + + + D +     KK  LA Q+ A+LATI  PA A+TG NN +  LS ++ 
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT

Query:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYD
         +GI+  +YFLV PPIIMNWLR+RWYRR   EMYLQFM VF+FFPG+L+WAPFLNFRK PRDP++K PW  P DP  +KN YLKYP+A PEDYD
Subjt:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYD

Arabidopsis top hitse value%identityAlignment
AT1G70760.1 inorganic carbon transport protein-related2.3e-4953.61Show/hide
Query:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT
        M  C  LGL+ P ALPSLS       S   I+   K P+++  +N N + + + D +     KK  LA Q+ A+LATI  PA A+TG NN +  LS ++ 
Subjt:  MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILT

Query:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYD
         +GI+  +YFLV PPIIMNWLR+RWYRR   EMYLQFM VF+FFPG+L+WAPFLNFRK PRDP++K PW  P DP  +KN YLKYP+A PEDYD
Subjt:  QLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGCTGCCTTGGCCTTGGCCTCCACATCCCCAGGGCCTTGCCTTCTCTCTCCTCTTCTCAATCCCTCTTTCCTTCTCTCTCTTCCATTTCCAAACTGCAGAAATT
GCCGTCTAATTCAACCCCCAACAATAAAAATGCAGTGGCAAGCATCAGTGAAGATCCCATTGCCAATGTTCACCAGAAGAAACCCAGTTTGGCTTTTCAAGTTGCAGCCC
TTTTAGCCACGATTGGGGAGCCAGCAAATGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGTCATGGATTTTGACACAATTGGGCATTGTTGGATTCTTTTACTTC
CTTGTCTTTCCGCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGGAACTTGTTGGAGATGTATCTGCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGAAT
TCTAGTGTGGGCGCCATTTCTGAACTTCAGAAAGCTTCCACGAGATCCATCGCTGAAGTATCCATGGGCGACGCCGGAAGACCCATCTCAGGTCAAAAATGCATACTTGA
AGTACCCATTTGCGAAGCCTGAAGATTACGACTGG
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGCTGCCTTGGCCTTGGCCTCCACATCCCCAGGGCCTTGCCTTCTCTCTCCTCTTCTCAATCCCTCTTTCCTTCTCTCTCTTCCATTTCCAAACTGCAGAAATT
GCCGTCTAATTCAACCCCCAACAATAAAAATGCAGTGGCAAGCATCAGTGAAGATCCCATTGCCAATGTTCACCAGAAGAAACCCAGTTTGGCTTTTCAAGTTGCAGCCC
TTTTAGCCACGATTGGGGAGCCAGCAAATGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGTCATGGATTTTGACACAATTGGGCATTGTTGGATTCTTTTACTTC
CTTGTCTTTCCGCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGGAACTTGTTGGAGATGTATCTGCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGAAT
TCTAGTGTGGGCGCCATTTCTGAACTTCAGAAAGCTTCCACGAGATCCATCGCTGAAGTATCCATGGGCGACGCCGGAAGACCCATCTCAGGTCAAAAATGCATACTTGA
AGTACCCATTTGCGAAGCCTGAAGATTACGACTGG
Protein sequenceShow/hide protein sequence
MRCCLGLGLHIPRALPSLSSSQSLFPSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYF
LVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW