; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021512 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021512
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationscaffold208:302651..302896
RNA-Seq ExpressionMS021512
SyntenyMS021512
Gene Ontology termsGO:0010078 - maintenance of root meristem identity (biological process)
GO:0010088 - phloem development (biological process)
GO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0045595 - regulation of cell differentiation (biological process)
GO:0016020 - membrane (cellular component)
GO:0048046 - apoplast (cellular component)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579251.1 hypothetical protein SDJN03_23699, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1461.05Show/hide
Query:  MTVRTGSCS--------AAPLLLFLWVVLILAPA--SLCHKLPPSPPPPRKLVRFSTASFRHAPPATSP----------AAAAAAYGDDKRLIHT
        M VRT +CS           L+LFLWV+LILAPA  +LC +LPPS   PRKLVRFSTASFRHAP ATSP          A AAAAYGD+KRLIHT
Subjt:  MTVRTGSCS--------AAPLLLFLWVVLILAPA--SLCHKLPPSPPPPRKLVRFSTASFRHAPPATSP----------AAAAAAYGDDKRLIHT

KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2064.71Show/hide
Query:  MTVRTGSCS--------AAPLLLFLWVVLILAPA--SLCHKLPPSPPPPRKLVRFSTASFRHAPPATSP----------AAAAAAYGDDKRLIHTGPNPL
        M VRT +CS           L+LFLWV+LILAPA  +LC +LPPS   PRKLVRFSTASFRHAPPATSP          A AAAAYGD+KRLIHTGPNPL
Subjt:  MTVRTGSCS--------AAPLLLFLWVVLILAPA--SLCHKLPPSPPPPRKLVRFSTASFRHAPPATSP----------AAAAAAYGDDKRLIHTGPNPL

Query:  HN
        HN
Subjt:  HN

KAG7032578.1 hypothetical protein SDJN02_06627, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1559.55Show/hide
Query:  TVRTGSCSAAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHA--PP------ATSPAAAAAAYGDDKRLIHTGPNPLHN
        T  + + +A   LLF WV+LI  P +LC  LPP PP  RKLV FSTAS  HA  PP       TS AAAAA Y DDKRLIHTGPNPLHN
Subjt:  TVRTGSCSAAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHA--PP------ATSPAAAAAAYGDDKRLIHTGPNPLHN

XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]3.7e-1960.42Show/hide
Query:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAA--------AAAYGDDKRLIHTGPNPLHN
        MT +TG+ S         LLLF WV+LILAP +LC  LPP PPP RKL RFSTASFRHAPP T+ + A        A+AY +DKRLIHTGPNPLHN
Subjt:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAA--------AAAYGDDKRLIHTGPNPLHN

XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]2.7e-1756.57Show/hide
Query:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATS-----------PAAAAAAYGDDKRLIHTGPNPLHN
        MT  TG+ S         L LF WV+LI AP +LC  LPP PPP RKL RFSTA F HAPP T+            AA AAAYG++KRLIHTGPNPLHN
Subjt:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATS-----------PAAAAAAYGDDKRLIHTGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein1.3e-1756.57Show/hide
Query:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATS-----------PAAAAAAYGDDKRLIHTGPNPLHN
        MT  TG+ S         L LF WV+LI AP +LC  LPP PPP RKL RFSTA F HAPP T+            AA AAAYG++KRLIHTGPNPLHN
Subjt:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATS-----------PAAAAAAYGDDKRLIHTGPNPLHN

A0A178WDE5 CLE171.7e-0659.18Show/hide
Query:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN
        P PPPPRK +R+STA FR       P +    YGDDKR++HTGPNPLHN
Subjt:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN

A0A1R3JXY9 Protein CLAVATA3/ESR-related 174.3e-0557.14Show/hide
Query:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN
        PS  PPRK   F +AS  HAP  +S +++   YGDDKR++HTGPNPLHN
Subjt:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN

A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like1.8e-1960.42Show/hide
Query:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAA--------AAAYGDDKRLIHTGPNPLHN
        MT +TG+ S         LLLF WV+LILAP +LC  LPP PPP RKL RFSTASFRHAPP T+ + A        A+AY +DKRLIHTGPNPLHN
Subjt:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAA--------AAAYGDDKRLIHTGPNPLHN

A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like1.8e-1960.42Show/hide
Query:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAA--------AAAYGDDKRLIHTGPNPLHN
        MT +TG+ S         LLLF WV+LILAP +LC  LPP PPP RKL RFSTASFRHAPP T+ + A        A+AY +DKRLIHTGPNPLHN
Subjt:  MTVRTGSCS------AAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAA--------AAAYGDDKRLIHTGPNPLHN

SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 174.7e-0959.18Show/hide
Query:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN
        P PPPPRK +R+STA FR       P +    YGDDKR++HTGPNPLHN
Subjt:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 173.4e-1059.18Show/hide
Query:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN
        P PPPPRK +R+STA FR       P +    YGDDKR++HTGPNPLHN
Subjt:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 173.4e-1059.18Show/hide
Query:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN
        P PPPPRK +R+STA FR       P +    YGDDKR++HTGPNPLHN
Subjt:  PSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTACGAACGGGGAGCTGCAGCGCCGCCCCGCTTCTTCTCTTCCTCTGGGTCGTTCTCATTTTAGCTCCGGCCAGCCTCTGCCACAAGCTGCCGCCGTCACCGCC
GCCGCCGAGGAAATTAGTACGGTTCTCCACGGCGTCGTTTCGCCATGCACCACCGGCAACTTCCCCAGCTGCCGCCGCCGCCGCTTACGGAGACGACAAGCGGTTAATTC
ATACGGGTCCGAATCCTCTTCACAAC
mRNA sequenceShow/hide mRNA sequence
ATGACAGTACGAACGGGGAGCTGCAGCGCCGCCCCGCTTCTTCTCTTCCTCTGGGTCGTTCTCATTTTAGCTCCGGCCAGCCTCTGCCACAAGCTGCCGCCGTCACCGCC
GCCGCCGAGGAAATTAGTACGGTTCTCCACGGCGTCGTTTCGCCATGCACCACCGGCAACTTCCCCAGCTGCCGCCGCCGCCGCTTACGGAGACGACAAGCGGTTAATTC
ATACGGGTCCGAATCCTCTTCACAAC
Protein sequenceShow/hide protein sequence
MTVRTGSCSAAPLLLFLWVVLILAPASLCHKLPPSPPPPRKLVRFSTASFRHAPPATSPAAAAAAYGDDKRLIHTGPNPLHN