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MS021524 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021524
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold208:459265..459723
RNA-Seq ExpressionMS021524
SyntenyMS021524
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579243.1 hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sororia]6.9e-4367.1Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSRE--ADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYD
        M+S++S A+S   L F P S  S  RRRR P   V ASSR  +  ++N   NN+YASGKLV+ESMIVLRKRIHE+KM ER   PP+DWL+WEKR Y DYD
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSRE--ADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYD

Query:  SHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        SH+CEALGYLQSHLMNTRPSVAL  L L+TLSVP+SSA+ILHRF  IAAALLAG+
Subjt:  SHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

KAG7016757.1 hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4266.46Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPP-SRVTASSRSRE----ADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYR
        M+S++S A+S   L F P S  S  RRRR PP   V ASSR  +    ++N   NN+YASGKLV+ESMIVLRKRIHE+KM ER   PP+DWL+WEKR Y 
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPP-SRVTASSRSRE----ADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYR

Query:  DYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        DYDSH+CEALGYLQSHLMNTRPSVAL  L L+TLSVP+SSA+ILHRF  IAAALLAG+
Subjt:  DYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

XP_022152316.1 uncharacterized protein LOC111020063 [Momordica charantia]2.2e-7398.69Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH
        MESLNSVASSTNSLRFLPSSPISGGRRRRG PSRVTASSRSREADN GRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH

Query:  VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
Subjt:  VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

XP_022939420.1 uncharacterized protein LOC111445338 [Cucurbita moschata]6.2e-4469.39Show/hide
Query:  SSTNSLRFLPSSPISGG--RRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALG
        SS NS  FL   PIS    RRRR P   V ASSR  ++++   NN+YASGKLV+ESMIVLRKRIHE+KM ER   PP+DWL+WEKR Y DYDSH+CEALG
Subjt:  SSTNSLRFLPSSPISGG--RRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALG

Query:  YLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        YLQSHLMNTRPSVAL  L L+TLSVP+SSA+ILHRF  IAAALLAG+
Subjt:  YLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

XP_038875502.1 uncharacterized protein LOC120067929 [Benincasa hispida]3.1e-4365.16Show/hide
Query:  MESLNSV---ASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDY
        M+S+NS+    SSTNS  FL   P +   R R  P  VT ++ SR + +   NN+YASGK+V+ESMIVLRKRIHE+KMAE+   PPADWL+WEKR+Y DY
Subjt:  MESLNSV---ASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDY

Query:  DSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAG
        DSH+CEALGYLQ+HLMNTRPSVAL  L L+TLSVP SSA++LHRFF IAAALLAG
Subjt:  DSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAG

TrEMBL top hitse value%identityAlignment
A0A0A0KPI5 Uncharacterized protein1.2e-4062.66Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGP-PSRVTASSRSREADN-----GGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFY
        MES+NS++ ST SL     SP +    RR P P+    +SR + AD+        NN+YA GK+V+ESMIVLRKRIHE+KMAE+   PPADWL+WEKR+Y
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGP-PSRVTASSRSREADN-----GGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFY

Query:  RDYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAG
         DYDSH+CEALGYLQSHLMNTRPSVAL  L L+ +SVP+SSAL+LHRF HIA ALLAG
Subjt:  RDYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAG

A0A5A7TY46 Uncharacterized protein1.3e-4264.97Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNN-----HYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYR
        M+S+NS++ ST S  F P +P   GRR+  P   V A SR + ADN   NN     +YA GK+V+ESMIVLRKRIHE+KMAE+   PPADWL+WEKR+Y 
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNN-----HYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYR

Query:  DYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAG
        DYDSH+CEALGYLQSHLMNTRPSVAL  L L+ +SVP+SSAL+LHRFFHIA ALLAG
Subjt:  DYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAG

A0A6J1DHC5 uncharacterized protein LOC1110200631.1e-7398.69Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH
        MESLNSVASSTNSLRFLPSSPISGGRRRRG PSRVTASSRSREADN GRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH

Query:  VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
Subjt:  VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

A0A6J1FMN3 uncharacterized protein LOC1114453383.0e-4469.39Show/hide
Query:  SSTNSLRFLPSSPISGG--RRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALG
        SS NS  FL   PIS    RRRR P   V ASSR  ++++   NN+YASGKLV+ESMIVLRKRIHE+KM ER   PP+DWL+WEKR Y DYDSH+CEALG
Subjt:  SSTNSLRFLPSSPISGG--RRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALG

Query:  YLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        YLQSHLMNTRPSVAL  L L+TLSVP+SSA+ILHRF  IAAALLAG+
Subjt:  YLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

A0A6J1JZG1 uncharacterized protein LOC1114892626.3e-4266.45Show/hide
Query:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSRE--ADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYD
        M+S++S A+S   L F P SP S  RRRR P   V ASSR  +  + N   NN+YASGKLV+ESMIVLRKRIHE+KM E+   PP+DWL+WEKR Y DYD
Subjt:  MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSRE--ADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYD

Query:  SHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        SH+CEALGYLQSHLMNTRPSV+L  L L+TLSVP+SSA+ILHRF  IAAALLAG+
Subjt:  SHVCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein4.5e-2443.79Show/hide
Query:  LNSVASSTNSLRFLP---SSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH
        +  +  S+++LRF P   S  I+ G  RR    R T              ++Y  G+ V+E+M+VLRKRIHEMKM ER   PP+ W++WEKRFY +YD+ 
Subjt:  LNSVASSTNSLRFLP---SSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSH

Query:  VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI
        +C+AL  LQ+ LMN+RPSVA     LL +SVPVSSA+   R   +A  LL  +
Subjt:  VCEALGYLQSHLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI

AT2G01300.1 unknown protein3.0e-2851.67Show/hide
Query:  PSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSV
        P +   + R   A + G++++Y  G+LV+E+MIVLRKRIHEMKM ER   PP+ W++WEKRFY  YDS +C+++G LQS LMN+RP+VA+A L  L +SV
Subjt:  PSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALGYLQSHLMNTRPSVALAFLTLLTLSV

Query:  PVSSALILHRFFHIAAALLA
        PVSS +I  R   +   LLA
Subjt:  PVSSALILHRFFHIAAALLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCCTCAATTCCGTCGCCTCCTCCACCAATTCCCTCCGATTCCTCCCCAGCAGCCCCATCTCCGGCGGGCGGCGGCGGCGAGGTCCTCCCTCGAGAGTCACGGC
GTCGTCGCGATCTCGAGAGGCGGACAACGGCGGGCGAAACAACCACTACGCTAGCGGGAAGCTGGTGGAGGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATGA
AGATGGCGGAGCGGGAGGCGGCGCCACCGGCCGACTGGCTCGAGTGGGAGAAGCGGTTCTACAGGGACTACGATTCGCACGTGTGCGAGGCCCTCGGCTACCTCCAATCG
CACCTCATGAACACAAGGCCCAGCGTCGCCTTGGCCTTCCTCACGCTCCTCACTCTCAGCGTCCCCGTCTCCTCCGCCCTCATTCTCCACCGCTTCTTCCACATCGCCGC
CGCCCTTCTCGCCGGGATC
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCCTCAATTCCGTCGCCTCCTCCACCAATTCCCTCCGATTCCTCCCCAGCAGCCCCATCTCCGGCGGGCGGCGGCGGCGAGGTCCTCCCTCGAGAGTCACGGC
GTCGTCGCGATCTCGAGAGGCGGACAACGGCGGGCGAAACAACCACTACGCTAGCGGGAAGCTGGTGGAGGAGAGCATGATCGTGCTCCGGAAGCGGATCCACGAGATGA
AGATGGCGGAGCGGGAGGCGGCGCCACCGGCCGACTGGCTCGAGTGGGAGAAGCGGTTCTACAGGGACTACGATTCGCACGTGTGCGAGGCCCTCGGCTACCTCCAATCG
CACCTCATGAACACAAGGCCCAGCGTCGCCTTGGCCTTCCTCACGCTCCTCACTCTCAGCGTCCCCGTCTCCTCCGCCCTCATTCTCCACCGCTTCTTCCACATCGCCGC
CGCCCTTCTCGCCGGGATC
Protein sequenceShow/hide protein sequence
MESLNSVASSTNSLRFLPSSPISGGRRRRGPPSRVTASSRSREADNGGRNNHYASGKLVEESMIVLRKRIHEMKMAEREAAPPADWLEWEKRFYRDYDSHVCEALGYLQS
HLMNTRPSVALAFLTLLTLSVPVSSALILHRFFHIAAALLAGI