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MS021562 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021562
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold108:10721..11077
RNA-Seq ExpressionMS021562
SyntenyMS021562
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143616.1 uncharacterized protein LOC111013476 [Momordica charantia]2.9e-4184.96Show/hide
Query:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL
        LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFNRKL
Subjt:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL

Query:  LEMQQMFLSGRGS
        LEMQQMFLSG GS
Subjt:  LEMQQMFLSGRGS
XP_022148911.1 uncharacterized protein LOC111017461 [Momordica charantia]2.9e-4184.96Show/hide
Query:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL
        LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFNRKL
Subjt:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL

Query:  LEMQQMFLSGRGS
        LEMQQMFLSG GS
Subjt:  LEMQQMFLSGRGS
XP_022153681.1 uncharacterized protein LOC111021138 [Momordica charantia]7.1e-1194.74Show/hide
Query:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKP
        LKA HASQGDEKTEEEIMETVLGRRSNYIIG+GYGPKP
Subjt:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKP
TrEMBL top hitse value%identityAlignment
A0A6J1CQT5 uncharacterized protein LOC1110134761.4e-4184.96Show/hide
Query:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL
        LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFNRKL
Subjt:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL

Query:  LEMQQMFLSGRGS
        LEMQQMFLSG GS
Subjt:  LEMQQMFLSGRGS
A0A6J1D6S9 uncharacterized protein LOC1110174611.4e-4184.96Show/hide
Query:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL
        LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFNRKL
Subjt:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKL

Query:  LEMQQMFLSGRGS
        LEMQQMFLSG GS
Subjt:  LEMQQMFLSGRGS
A0A6J1DLF1 uncharacterized protein LOC1110211383.4e-1194.74Show/hide
Query:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKP
        LKA HASQGDEKTEEEIMETVLGRRSNYIIG+GYGPKP
Subjt:  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTGAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATTGGATATGG
ACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAA
AAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTTCTT
TCGGGGCGAGGAAGTTATCGAATAGTA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCTGAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATTGGATATGG
ACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAA
AAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTTCTT
TCGGGGCGAGGAAGTTATCGAATAGTA
Protein sequenceShow/hide protein sequence
MCLKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMFL
SGRGSYRIV