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MS021569 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021569
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold108:160213..160575
RNA-Seq ExpressionMS021569
SyntenyMS021569
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]2.4e-0632.54Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSSN
        ++  P+RINILIWI +    I++ ++L+ K S   + PS+C LC   S+N  H+   C +S   W  +   F ++W F +    +V+ LL G     +  
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSSN

Query:  KV-----KANSSELWLERNHIIFQKK
         +     KA   E+W+ERN  IF  K
Subjt:  KV-----KANSSELWLERNHIIFQKK

KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]2.4e-0632.79Show/hide
Query:  PKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSS-----S
        P  I I  ++H ++  I    V++ +L    L+PS C LC  + E+    LF C  S+KCW  +L  F + WAF   + +N+  +L+G   K        
Subjt:  PKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSS-----S

Query:  NKVKANSSELWLERNHIIFQKK
        N  KA  S++W E N  IF+ K
Subjt:  NKVKANSSELWLERNHIIFQKK

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]6.3e-0732.54Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSSN
        ++  P+RINILIWI +    +N+ ++L+ K S   + PS+C LC   S+N  H+   C +S   W  +   F ++W F +    +V+ LL G     +  
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSSN

Query:  KV-----KANSSELWLERNHIIFQKK
         +     KA   E+W+ERN  IF  K
Subjt:  KV-----KANSSELWLERNHIIFQKK

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]3.1e-1440.16Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSS-
        KT  P+R+N+  WI L    +N  D+++ K     LLPS C LC    E+ +HL F C  + KCW  +  +F + W F     +NV  LL GP   SSS 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSS-

Query:  -----NKVKANSSELWLERNHIIFQKK
             N VKA  SELW ERN  +F++K
Subjt:  -----NKVKANSSELWLERNHIIFQKK

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]2.2e-1241.27Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSS-
        KT  P+R+NILIWI L    +N  +VL+ K     L P+VC  C   SE   HL F C  S  CW  +L  F +     ND+K+NV  LL  P +  S+ 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSS-

Query:  ----NKVKANSSELWLERNHIIFQKK
            N VKA  ++LW ERN  IF  K
Subjt:  ----NKVKANSSELWLERNHIIFQKK

TrEMBL top hitse value%identityAlignment
A0A6J1DIE2 uncharacterized protein LOC1110207651.5e-1440.16Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSS-
        KT  P+R+N+  WI L    +N  D+++ K     LLPS C LC    E+ +HL F C  + KCW  +  +F + W F     +NV  LL GP   SSS 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSS-

Query:  -----NKVKANSSELWLERNHIIFQKK
             N VKA  SELW ERN  +F++K
Subjt:  -----NKVKANSSELWLERNHIIFQKK

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)4.1e-0429.84Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-
        K   P +I   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SL+ W+ +L    + W      ++   +NL +    K + 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-

Query:  ---SNKVKANSSELWLERNHIIFQ
              V A    +W+ERN  IFQ
Subjt:  ---SNKVKANSSELWLERNHIIFQ

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)4.1e-0429.84Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-
        K   P +I   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SL+ W+ +L    + W      ++   +NL +    K + 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-

Query:  ---SNKVKANSSELWLERNHIIFQ
              V A    +W+ERN  IFQ
Subjt:  ---SNKVKANSSELWLERNHIIFQ

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)4.1e-0429.84Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-
        K   P +I   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SL+ W+ +L    + W      ++   +NL +    K + 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-

Query:  ---SNKVKANSSELWLERNHIIFQ
              V A    +W+ERN  IFQ
Subjt:  ---SNKVKANSSELWLERNHIIFQ

M5XV38 zf-RVT domain-containing protein4.1e-0429.84Show/hide
Query:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-
        K   P +I   +W+  N   IN  D ++ +     L PS C LC  ++EN +HL   CS SL+ W+ +L    + W      ++   +NL +    K + 
Subjt:  KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPITKSS-

Query:  ---SNKVKANSSELWLERNHIIFQ
              V A    +W+ERN  IFQ
Subjt:  ---SNKVKANSSELWLERNHIIFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAACCAATTGTCCTAAAAGAATCAACATTCTGATCTGGATTCATTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTTTCAGCTTTT
GCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGA
TTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCTATCACCAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGG
TTGGAACGTAACCATATAATCTTTCAAAAAAAG
mRNA sequenceShow/hide mRNA sequence
AAAACCAATTGTCCTAAAAGAATCAACATTCTGATCTGGATTCATTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTTTCAGCTTTT
GCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGA
TTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCTATCACCAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGG
TTGGAACGTAACCATATAATCTTTCAAAAAAAG
Protein sequenceShow/hide protein sequence
KTNCPKRINILIWIHLNSSSINAMDVLKWKLSYFQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPITKSSSNKVKANSSELW
LERNHIIFQKK