; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021573 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021573
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationscaffold108:194979..195122
RNA-Seq ExpressionMS021573
SyntenyMS021573
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601558.1 hypothetical protein SDJN03_06791, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0456.25Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        G + L  ++A+ LQAAV    LPLHTDSRWIVD+ G+ VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
XP_022151747.1 uncharacterized protein LOC111019655 [Momordica charantia]2.3e-0560.42Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        GFI + F++AV L AA     LPLHTDSRWIVD+GG  VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
XP_022957392.1 uncharacterized protein LOC111458804 [Cucurbita moschata]2.0e-0456.25Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        G + L  ++A+ LQAAV    LPLHTDSRWIVD+ G+ VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
XP_022997703.1 uncharacterized protein LOC111492584 [Cucurbita maxima]2.0e-0456.25Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        G + L  ++A+ LQAAV    LPLHTDSRWIVD+ G+ VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
XP_038893388.1 glycosyl hydrolase 5 family protein-like [Benincasa hispida]2.0e-0458.33Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        G I    ++AV LQAAV    LPLHTDSRWIVD+ G+ VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
TrEMBL top hitse value%identityAlignment
A0A1U8Q3H0 Mannan endo-1,4-beta-mannosidase8.1e-0456.1Show/hide
Query:  ISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        +S   +Q A+A   LPL+TDSRWIVD+ GK VK+  +NWAS
Subjt:  ISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
A0A6J1DEB6 Mannan endo-1,4-beta-mannosidase1.1e-0560.42Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        GFI + F++AV L AA     LPLHTDSRWIVD+GG  VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
A0A6J1GZ00 Mannan endo-1,4-beta-mannosidase9.6e-0556.25Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        G + L  ++A+ LQAAV    LPLHTDSRWIVD+ G+ VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
A0A6J1KEP8 Mannan endo-1,4-beta-mannosidase9.6e-0556.25Show/hide
Query:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        G + L  ++A+ LQAAV    LPLHTDSRWIVD+ G+ VK+R +NW S
Subjt:  GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein2.7e-0448.89Show/hide
Query:  FLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
        F FF S +  Q  V  M  PL T SRWIVD+ G  VK+   NW S
Subjt:  FLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS
AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein4.2e-0548.89Show/hide
Query:  FFISAVGLQAAVAVMELPLHTDSRWIVDDG--GKIVKIRWLNWAS
        FFIS   L   +     P  TDSRWIVDDG  G+ VK+  +NW S
Subjt:  FFISAVGLQAAVAVMELPLHTDSRWIVDDG--GKIVKIRWLNWAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTTCATCTTCCTCTTCTTTATCAGTGCGGTGGGGCTCCAGGCGGCAGTGGCAGTAATGGAGTTGCCGCTGCACACCGATTCACGGTGGATTGTTGATGATGGAGGCAA
AATAGTGAAGATAAGATGGCTGAATTGGGCGTCA
mRNA sequenceShow/hide mRNA sequence
GGGTTCATCTTCCTCTTCTTTATCAGTGCGGTGGGGCTCCAGGCGGCAGTGGCAGTAATGGAGTTGCCGCTGCACACCGATTCACGGTGGATTGTTGATGATGGAGGCAA
AATAGTGAAGATAAGATGGCTGAATTGGGCGTCA
Protein sequenceShow/hide protein sequence
GFIFLFFISAVGLQAAVAVMELPLHTDSRWIVDDGGKIVKIRWLNWAS