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MS021577 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021577
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1639)
Genome locationscaffold108:325861..326223
RNA-Seq ExpressionMS021577
SyntenyMS021577
Gene Ontology termsNA
InterPro domainsIPR012438 - Protein of unknown function DUF1639


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038875002.1 uncharacterized protein LOC120067524 [Benincasa hispida]5.7e-0837.78Show/hide
Query:  LSWGKHKHRRFINRVDLDS--PISELVKEQALVVVAEERPATVNNLPWKLRNKNGSVKATMEEEEKK------------GSVKSKRVQSKMAKKESESRR
        L WG H+HR  IN  D+++  P SE               A    LP KLR +  +++  ++EEEKK             S + K ++S+  +K+    +
Subjt:  LSWGKHKHRRFINRVDLDS--PISELVKEQALVVVAEERPATVNNLPWKLRNKNGSVKATMEEEEKK------------GSVKSKRVQSKMAKKESESRR

Query:  LELRLSRSEIEEDFLKMLGKKPSSRPKKRSKAVQK
        L + LS+S+IEEDFLKM+GKKP SRPKKRS+  Q+
Subjt:  LELRLSRSEIEEDFLKMLGKKPSSRPKKRSKAVQK
TrEMBL top hitse value%identityAlignment
A0A5N5L603 Uncharacterized protein9.2e-0434.71Show/hide
Query:  NRVDLDSPISELVKEQALVVVAEERPATVNNLPWKLRNKN-----------GSVKATMEEEEKKGSVKSKRVQ-SKMAKKESESRRLELRLSRSEIEEDF
        + V+ +  +      +A+V   EE PA     PW LR +            G V        +  S KS R++  K  ++E E     + LS+ EIEEDF
Subjt:  NRVDLDSPISELVKEQALVVVAEERPATVNNLPWKLRNKN-----------GSVKATMEEEEKKGSVKSKRVQ-SKMAKKESESRRLELRLSRSEIEEDF

Query:  LKMLGKKPSSRPKKRSKAVQK
        ++MLG +PS RPKKRS+ VQK
Subjt:  LKMLGKKPSSRPKKRSKAVQK
A0A6N2N3W5 Uncharacterized protein9.2e-0434.71Show/hide
Query:  NRVDLDSPISELVKEQALVVVAEERPATVNNLPWKLRNKN-----------GSVKATMEEEEKKGSVKSKRVQ-SKMAKKESESRRLELRLSRSEIEEDF
        + V+ +  +      +A+V   EE PA     PW LR +            G V        +  S KS R++  K  ++E E     + LS+ EIEEDF
Subjt:  NRVDLDSPISELVKEQALVVVAEERPATVNNLPWKLRNKN-----------GSVKATMEEEEKKGSVKSKRVQ-SKMAKKESESRRLELRLSRSEIEEDF

Query:  LKMLGKKPSSRPKKRSKAVQK
        ++MLG +PS RPKKRS+ VQK
Subjt:  LKMLGKKPSSRPKKRSKAVQK
D7KWA8 Uncharacterized protein9.2e-0445.05Show/hide
Query:  EERPATVNNLPWKLRNKNGSVKATMEEEEKKGSV--KSKRVQSKMAKKE--SESRRLELRLSRSEIEEDFLKMLGKKPSSRPKKRSKAVQK
        E   ATV   PW LR +  + KA +   +  GSV  ++KRV S +   E   +  RL   LS+ EIEED++KM+G+KP  RPKKRS+ VQK
Subjt:  EERPATVNNLPWKLRNKNGSVKATMEEEEKKGSV--KSKRVQSKMAKKE--SESRRLELRLSRSEIEEDFLKMLGKKPSSRPKKRSKAVQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68340.1 Protein of unknown function (DUF1639)2.8e-0540.7Show/hide
Query:  ATVNNLPWKLRNKNGSVKATME-EEEKKGSVKSKRVQSKMAKKE--SESRRLELRLSRSEIEEDFLKMLGKKPSSRPKKRSKAVQK
        ATV   PW LR +  + KA++    + K   K   +   M   E   +  RL   LS+ EIEED++ M+G KP  RPKKRS+ VQK
Subjt:  ATVNNLPWKLRNKNGSVKATME-EEEKKGSVKSKRVQSKMAKKE--SESRRLELRLSRSEIEEDFLKMLGKKPSSRPKKRSKAVQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAGTTGGGGGAAACATAAACACAGGAGGTTTATTAACCGTGTGGATCTTGATTCTCCGATTTCTGAGTTGGTCAAGGAACAAGCATTGGTGGTGGTGGCGGAAGAACG
TCCAGCAACGGTGAACAACTTGCCTTGGAAATTGAGGAACAAAAATGGAAGCGTGAAGGCAACGATGGAGGAGGAGGAGAAGAAGGGTAGTGTGAAATCAAAGAGGGTGC
AATCGAAAATGGCGAAGAAGGAGTCGGAGTCACGGAGACTGGAGTTGAGGTTGTCCAGGTCAGAGATCGAAGAGGATTTCTTGAAAATGTTGGGCAAGAAACCCTCCTCC
AGGCCCAAGAAGAGGTCCAAGGCCGTACAGAAA
mRNA sequenceShow/hide mRNA sequence
TTGAGTTGGGGGAAACATAAACACAGGAGGTTTATTAACCGTGTGGATCTTGATTCTCCGATTTCTGAGTTGGTCAAGGAACAAGCATTGGTGGTGGTGGCGGAAGAACG
TCCAGCAACGGTGAACAACTTGCCTTGGAAATTGAGGAACAAAAATGGAAGCGTGAAGGCAACGATGGAGGAGGAGGAGAAGAAGGGTAGTGTGAAATCAAAGAGGGTGC
AATCGAAAATGGCGAAGAAGGAGTCGGAGTCACGGAGACTGGAGTTGAGGTTGTCCAGGTCAGAGATCGAAGAGGATTTCTTGAAAATGTTGGGCAAGAAACCCTCCTCC
AGGCCCAAGAAGAGGTCCAAGGCCGTACAGAAA
Protein sequenceShow/hide protein sequence
LSWGKHKHRRFINRVDLDSPISELVKEQALVVVAEERPATVNNLPWKLRNKNGSVKATMEEEEKKGSVKSKRVQSKMAKKESESRRLELRLSRSEIEEDFLKMLGKKPSS
RPKKRSKAVQK