; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021582 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021582
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAnaphase-promoting complex subunit 11
Genome locationscaffold108:454472..455796
RNA-Seq ExpressionMS021582
SyntenyMS021582
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0045842 - positive regulation of mitotic metaphase/anaphase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024991 - Anaphase-promoting complex subunit 11, RING-H2 finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV69476.1 zf-Apc11 domain-containing protein, partial [Cephalotus follicularis]2.1e-4696.34Show/hide
Query:  SIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        S+K RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  SIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

KAB2630342.1 ring finger [Pyrus ussuriensis x Pyrus communis]5.6e-4794.05Show/hide
Query:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        T S+ Y+WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

KYP42684.1 Anaphase-promoting complex subunit 11, partial [Cajanus cajan]1.3e-4696.3Show/hide
Query:  IKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        +KYRWHAV+SWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  IKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

PON69570.1 Anaphase-promoting complex subunit [Parasponia andersonii]1.4e-4592.86Show/hide
Query:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        +S +  RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

XP_015874772.1 anaphase-promoting complex subunit 11-like isoform X2 [Ziziphus jujuba]1.4e-4595.06Show/hide
Query:  IKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        ++ RWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWG+CNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  IKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

TrEMBL top hitse value%identityAlignment
A0A151RJC8 Anaphase-promoting complex subunit 11 (Fragment)6.1e-4796.3Show/hide
Query:  IKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        +KYRWHAV+SWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  IKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A1Q3BN88 Anaphase-promoting complex subunit 11 (Fragment)1.0e-4696.34Show/hide
Query:  SIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        S+K RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  SIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A2P5D8D2 Anaphase-promoting complex subunit 116.7e-4692.86Show/hide
Query:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        +S +  RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A5N5HW07 Anaphase-promoting complex subunit 112.7e-4794.05Show/hide
Query:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        T S+ Y+WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

B9RFR6 Anaphase-promoting complex subunit 116.7e-4692.77Show/hide
Query:  SSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        S + YRWHA+ASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWG CNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  SSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

SwissProt top hitse value%identityAlignment
Q3ZCF6 Anaphase-promoting complex subunit 112.7e-3672.37Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q5R8A2 Anaphase-promoting complex subunit 111.0e-3571.05Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9CPX9 Anaphase-promoting complex subunit 112.7e-3672.37Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9M9L0 Anaphase-promoting complex subunit 117.6e-4797.4Show/hide
Query:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        +WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9NYG5 Anaphase-promoting complex subunit 111.0e-3571.05Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 117.1e-4898.68Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT3G05870.2 anaphase-promoting complex/cyclosome 117.1e-4898.68Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT3G42830.1 RING/U-box superfamily protein3.0e-1439.02Show/hide
Query:  RWHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        +W AVA W W+   + C ICR      C +C         ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Subjt:  RWHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT5G20570.1 RING-box 16.1e-1539.02Show/hide
Query:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        +W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Subjt:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT5G26640.1 BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2)3.7e-1281.25Show/hide
Query:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        TW+AQDETCG+CRM FD  CPDCKLP DDCPL
Subjt:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCTCTTCCATAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACCTGTGGGATTTGTAGGATGGCCTTTGATGGTTGCTGCCCTGATTG
CAAACTCCCTGGGGATGATTGCCCATTGATTTGGGGTGCCTGCAACCATGCTTTCCATCTTCATTGCATCTTAAAATGGGTGAATTCACAGACCTCTCAGGCTCATTGCC
CCATGTGCCGCAGAGAATGGCAATTCAAGGGG
mRNA sequenceShow/hide mRNA sequence
ACCTCTTCCATAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACCTGTGGGATTTGTAGGATGGCCTTTGATGGTTGCTGCCCTGATTG
CAAACTCCCTGGGGATGATTGCCCATTGATTTGGGGTGCCTGCAACCATGCTTTCCATCTTCATTGCATCTTAAAATGGGTGAATTCACAGACCTCTCAGGCTCATTGCC
CCATGTGCCGCAGAGAATGGCAATTCAAGGGG
Protein sequenceShow/hide protein sequence
TSSIKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG