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MS021617 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021617
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32 family member A-like
Genome locationscaffold320:184502..184732
RNA-Seq ExpressionMS021617
SyntenyMS021617
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038099.1 uncharacterized protein E6C27_scaffold36G003190 [Cucumis melo var. makuwa]6.8e-0743.42Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE
        IVQNK++WD+PE ++V++D   +LE    I +D++I D  + R D+ PTVVD +  E +  +     IDD FINDE
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE

KAA0039105.1 acidic leucine-rich nuclear phosphoprotein 32 family member A-like [Cucumis melo var. makuwa]2.3e-0742.67Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFIND
        IVQNKR+WDVPE+DDV+N+ +N+LEI     +D+ I D + YR D+ PT+V+  ++           + D FI+D
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFIND

KAA0040145.1 transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]5.2e-0743.42Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE
        IVQNK++WD+PE ++V++D+  +LE    I +D++I D  + R D+ PTVVD +  E +  +     IDD FINDE
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE

KAA0045598.1 uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]6.8e-0743.42Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE
        IVQNK++WD+PE ++V++D   +LE    I +D++I D  + R D+ PTVVD +  E +  +     IDD FINDE
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE

KAA0047152.1 hypothetical protein E6C27_scaffold83G00220 [Cucumis melo var. makuwa]5.2e-0743.55Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNT
        +VQNKR+WDVPE++DV+ND +N+LEI     +D  I D +  R+D+ PT+V+ +++   + T
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNT

TrEMBL top hitse value%identityAlignment
A0A5A7T9T1 Uncharacterized protein3.3e-0743.42Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE
        IVQNK++WD+PE ++V++D   +LE    I +D++I D  + R D+ PTVVD +  E +  +     IDD FINDE
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE

A0A5A7TCH8 Acidic leucine-rich nuclear phosphoprotein 32 family member A-like1.1e-0742.67Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFIND
        IVQNKR+WDVPE+DDV+N+ +N+LEI     +D+ I D + YR D+ PT+V+  ++           + D FI+D
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFIND

A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class2.5e-0743.42Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE
        IVQNK++WD+PE ++V++D+  +LE    I +D++I D  + R D+ PTVVD +  E +  +     IDD FINDE
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE

A0A5A7TRX4 DUF4216 domain-containing protein3.3e-0743.42Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE
        IVQNK++WD+PE ++V++D   +LE    I +D++I D  + R D+ PTVVD +  E +  +     IDD FINDE
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDE

A0A5D3BQ15 Uncharacterized protein2.5e-0743.55Show/hide
Query:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNT
        +VQNKR+WDVPE++DV+ND +N+LEI     +D  I D +  R+D+ PT+V+ +++   + T
Subjt:  IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAGTTCAAAATAAACGTTTGTGGGATGTCCCAGAACTAGATGATGTGGATAATGATGAAGTTAATATGTTAGAGATAGAAGGTGGTATTAGCATCGATCAAACTATTGT
AGATAGTTCTTACTATAGAGATGACATTACTCCAACTGTTGTTGATCTACAAATCATTGAAGAACGAGTTAACACGGGTCCACCATTGAACATAGACGATAGTTTTATAA
ATGACGAAGAG
mRNA sequenceShow/hide mRNA sequence
ATAGTTCAAAATAAACGTTTGTGGGATGTCCCAGAACTAGATGATGTGGATAATGATGAAGTTAATATGTTAGAGATAGAAGGTGGTATTAGCATCGATCAAACTATTGT
AGATAGTTCTTACTATAGAGATGACATTACTCCAACTGTTGTTGATCTACAAATCATTGAAGAACGAGTTAACACGGGTCCACCATTGAACATAGACGATAGTTTTATAA
ATGACGAAGAG
Protein sequenceShow/hide protein sequence
IVQNKRLWDVPELDDVDNDEVNMLEIEGGISIDQTIVDSSYYRDDITPTVVDLQIIEERVNTGPPLNIDDSFINDEE