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MS021618 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021618
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold320:185456..185780
RNA-Seq ExpressionMS021618
SyntenyMS021618
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]2.6e-1553.57Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q +FK++R++L+ +Y E      AR  P  R+T  EDW+ LCDRWETP+W K+ ++K K ++AKLP+NHRAGSKSF +LQHEL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

XP_022157107.1 uncharacterized protein LOC111023906 isoform X2 [Momordica charantia]2.5e-3488.1Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        L+TTFKEFRAEL+ HYKENGP NVAREKPHARITKL+DWHKLCDRWETPDW K+KS KAK S+AKLPYNHRAGSKSFGRLQHEL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]9.7e-1552.38Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q TFKE+R++LY HY+       AR  P  RIT   DW+ LC+RWETP+W KKK+E  K S++K+PY HR GSKSF ++Q E+
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]9.7e-1552.38Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q TFKE+R++LY HY+       AR  P  RIT   DW+ LC+RWETP+W KKK+E  K S++K+PY HR GSKSF ++Q E+
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]9.7e-1552.38Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q TFKE+R++LY HY+       AR  P  RIT   DW+ LC+RWETP+W KKK+E  K S++K+PY HR GSKSF ++Q E+
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

TrEMBL top hitse value%identityAlignment
A0A5A7TRX4 DUF4216 domain-containing protein2.4e-1148.81Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q TF+EFRA+L+ +Y +   L  AR  P  RIT  EDW+ +CDRWET  WKKK+ E  K S + + +NH  G+KSF +++HEL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

A0A5A7VAV0 Transposon protein, putative, CACTA, En/Spm sub-class4.5e-1047.62Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q TF+EFRA+L+ +Y E      AR  P  RIT LEDW+ +CDRWET  WKKK+ EK K S++ + +NH   + SF ++++EL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

A0A5D3BA62 DUF4218 domain-containing protein4.5e-1047.62Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q TF+EFRA+L+ +Y E      AR  P  RIT LEDW+ +CDRWET  WKKK+ EK K S++ + +NH   + SF ++++EL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

A0A6J1DTP1 uncharacterized protein LOC111023906 isoform X21.2e-3488.1Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        L+TTFKEFRAEL+ HYKENGP NVAREKPHARITKL+DWHKLCDRWETPDW K+KS KAK S+AKLPYNHRAGSKSFGRLQHEL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

A0A6J1DUH3 uncharacterized protein LOC1110232121.2e-1553.57Show/hide
Query:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL
        +Q +FK++R++L+ +Y E      AR  P  R+T  EDW+ LCDRWETP+W K+ ++K K ++AKLP+NHRAGSKSF +LQHEL
Subjt:  LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTACAAACAACATTTAAGGAGTTTAGGGCAGAATTGTATACCCACTACAAAGAAAATGGACCTCTCAATGTAGCTCGGGAGAAACCTCATGCTAGAATCACGAAGTTGGA
GGATTGGCACAAGTTGTGCGACAGATGGGAGACTCCCGATTGGAAGAAAAAAAAATCAGAAAAAGCCAAGACAAGTAAAGCGAAGCTACCATACAACCATCGGGCTGGGT
CAAAATCTTTCGGTCGCCTGCAACACGAATTG
mRNA sequenceShow/hide mRNA sequence
CTACAAACAACATTTAAGGAGTTTAGGGCAGAATTGTATACCCACTACAAAGAAAATGGACCTCTCAATGTAGCTCGGGAGAAACCTCATGCTAGAATCACGAAGTTGGA
GGATTGGCACAAGTTGTGCGACAGATGGGAGACTCCCGATTGGAAGAAAAAAAAATCAGAAAAAGCCAAGACAAGTAAAGCGAAGCTACCATACAACCATCGGGCTGGGT
CAAAATCTTTCGGTCGCCTGCAACACGAATTG
Protein sequenceShow/hide protein sequence
LQTTFKEFRAELYTHYKENGPLNVAREKPHARITKLEDWHKLCDRWETPDWKKKKSEKAKTSKAKLPYNHRAGSKSFGRLQHEL