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MS021623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold320:251899..252030
RNA-Seq ExpressionMS021623
SyntenyMS021623
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALF03359.1 hypothetical protein CsCp113 [Cucumis sativus var. hardwickii]2.1e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
QJD26342.1 Ycf1 [Trichosanthes kirilowii]2.1e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]2.1e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
YP_009738261.1 Ycf1 [Siraitia siamensis]2.1e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]2.1e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
TrEMBL top hitse value%identityAlignment
A0A1X9Q205 Protein TIC 2141.0e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
A0A218KG90 Protein TIC 2141.0e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
A0A6C0ME96 Protein TIC 2141.0e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
A0A6M3RWE9 Protein TIC 2141.0e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
A0A6M3S424 Protein TIC 2141.0e-13100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
SwissProt top hitse value%identityAlignment
A4GYX4 Protein TIC 2141.4e-1597.73Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Q0G9Q4 Protein TIC 2144.0e-1595.45Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSML RLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Q14FA0 Protein TIC 2141.4e-1597.73Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Q49KU0 Protein TIC 2144.0e-1595.45Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSML RLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Q4VZL0 Protein TIC 2142.8e-16100Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein3.0e-1384.09Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRN MRNL IQCVF NNLIF+LFNH ILPSSML RLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
ATCG01000.1 Ycf1 protein3.2e-1590.91Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRN MRNL IQCVFLNNLIFQLFNHFILPSSML RLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
ATCG01130.1 Ycf1 protein3.2e-1590.91Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRN MRNL IQCVFLNNLIFQLFNHFILPSSML RLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
ATMG00370.1 Ycf1 protein3.0e-1384.09Show/hide
Query:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF
        STTRN MRNL IQCVF NNLIF+LFNH ILPSSML RLVNI MF
Subjt:  STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTACCACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAG
ATTAGTCAATATTTCTATGTTT
mRNA sequenceShow/hide mRNA sequence
TCTACCACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAG
ATTAGTCAATATTTCTATGTTT
Protein sequenceShow/hide protein sequence
STTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMF