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MS021643 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021643
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B
Genome locationscaffold348:13136..13423
RNA-Seq ExpressionMS021643
SyntenyMS021643
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019377 - NADH-ubiquinone oxidoreductase, subunit 10
IPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137473.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus]2.0e-4895.83Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022137450.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia]2.1e-50100Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]1.2e-4895.83Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]4.0e-4996.88Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]1.5e-4895.83Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFD E+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

TrEMBL top hitse value%identityAlignment
A0A0A0LSZ4 Uncharacterized protein9.7e-4995.83Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A1S3C7E2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B9.7e-4995.83Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1C6P3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B1.0e-50100Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like5.7e-4995.83Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like2.0e-4996.88Show/hide
Query:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial8.0e-0840.62Show/hide
Query:  PDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYL
        P  FD  + Y D   + + ++ I+RE+W+ +   +++RE L  CY  EGVNHL+KC HL ++YL
Subjt:  PDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B1.9e-4180.41Show/hide
Query:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+K + EF+ES PD FD ENPYKDPVAM+EMREHIVREKWI IEKAKILRE+++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A5.5e-4179.38Show/hide
Query:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+K + EF+ES PD FD ENPYKDPVAM+EMREHIVREKWI IEKAKILRE+++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS63.9e-4279.38Show/hide
Query:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+K + EF+ES PD FD ENPYKDPVAM+EMREHIVREKWI IEKAKILRE+++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.1 Complex I subunit NDUFS61.3e-4280.41Show/hide
Query:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+K + EF+ES PD FD ENPYKDPVAM+EMREHIVREKWI IEKAKILRE+++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.2 Complex I subunit NDUFS61.3e-4280.41Show/hide
Query:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+K + EF+ES PD FD ENPYKDPVAM+EMREHIVREKWI IEKAKILRE+++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRRKTV-EFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAGGAAGACAGTGGAATTCGATGAGTCTCCGCCGGATGATTTCGATGCGGAGAATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACACATTGT
GAGAGAGAAGTGGATCGATATCGAAAAGGCGAAGATACTGAGGGAAAGGCTCAGATGGTGCTACCGCATTGAAGGAGTCAACCATCTTCAGAAGTGCCGCCACCTCGTCC
AACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGACGGACGCCACCCATCTCTCCACGGT
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGAGGAAGACAGTGGAATTCGATGAGTCTCCGCCGGATGATTTCGATGCGGAGAATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACACATTGT
GAGAGAGAAGTGGATCGATATCGAAAAGGCGAAGATACTGAGGGAAAGGCTCAGATGGTGCTACCGCATTGAAGGAGTCAACCATCTTCAGAAGTGCCGCCACCTCGTCC
AACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGACGGACGCCACCCATCTCTCCACGGT
Protein sequenceShow/hide protein sequence
MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG