CuGenDBv2

Gene ID	MS021644
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cleavage stimulating factor 64
Genome location	scaffold348:14143..17420
RNA-Seq Expression	MS021644
Synteny	MS021644
Gene Ontology terms	GO:0009749 - response to glucose (biological process) GO:0031124 - mRNA 3'-end processing (biological process) GO:0035194 - posttranscriptional gene silencing by RNA (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR025742 - Cleavage stimulation factor subunit 2, hinge domain IPR026896 - Transcription termination and cleavage factor, C-terminal domain IPR038192 - Transcription termination and cleavage factor, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022137042.1 RNA-binding protein 33 isoform X1 [Momordica charantia]

1.3e-210

98.23

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTP
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        AGQISLQEQTNAPPLAPPRKQYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ+GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

XP_022137043.1 RNA-binding protein 33 isoform X2 [Momordica charantia]

2.6e-211

98.48

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTP
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        AGQISLQEQTNAPPLAPPRKQYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ+GHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

XP_022137044.1 RNA-binding protein 33 isoform X3 [Momordica charantia]

1.3e-202

95.2

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP              QPSTHTTHQSNIQPTQTP
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        AGQISLQEQTNAPPLAPPRKQYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ+GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

XP_022924107.1 proline-rich protein 36-like [Cucurbita moschata]

7.7e-187

88.44

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQV GTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPS+ PS SQHSQP THTT QSNIQPTQT 
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        A QISLQEQT+ PPLAPPRKQYQN PSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP+LPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        +QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP Q+GHNMNYQP GIPQHVSQP+FH GTKLPPG+GNSFPP  QSA+PSQP PQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVG+SKPADRGPWMPGPPENPT PQQLSGPP  PSV GQMGPGNQPR APPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

XP_023519984.1 cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]

7.7e-187

88.19

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQV GTGLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPS+ PS SQHSQPSTHTT QSNIQPTQT 
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        A QI+LQEQT+ PPLAPPRKQYQN PSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP+LPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        +QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP QMGHNMNYQP GIPQHVSQP+FH GTKLPPG+GNSFPP  QSA+PSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPP  PSV GQM PGNQPR APPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C700 extensin

1.4e-186

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQV+G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQV PSIQPS SQHSQPST  T QSN+QPTQT 
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        A QISLQEQT+APPLAPPRKQYQN PSMPISSTTLPT N+QP+  PLIPLQTPQHPKGF++ QANPISVPQPSQ+PSV P+LPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQ-PPPQSLYQAGGSK
        +QLQQPLQTAE+ HLP QAPLPP SR PTGPNFHQHYP QMGHNMNYQP GIPQHVSQPMFH GTKLPPG+GNSF PQ QS +PSQ PPPQS+YQAGGSK
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQ-PPPQSLYQAGGSK

Query:  LGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVP-GQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        LGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP  PSVP GQMGP NQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  LGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVP-GQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

A0A6J1C620 RNA-binding protein 33 isoform X3

6.3e-203

95.2

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP              QPSTHTTHQSNIQPTQTP
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        AGQISLQEQTNAPPLAPPRKQYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ+GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

A0A6J1C742 RNA-binding protein 33 isoform X1

6.3e-211

98.23

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTP
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        AGQISLQEQTNAPPLAPPRKQYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ+GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

A0A6J1C968 RNA-binding protein 33 isoform X2

1.3e-211

98.48

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTP
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        AGQISLQEQTNAPPLAPPRKQYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ+GHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

A0A6J1E818 proline-rich protein 36-like

3.7e-187

88.44

Show/hide

Query:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP
        MAGKQV GTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ IPS+ PS SQHSQP THTT QSNIQPTQT 
Subjt:  MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTP

Query:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS
        A QISLQEQT+ PPLAPPRKQYQN PSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP+LPSAAQPPLLHQPQISTAS
Subjt:  AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTAS

Query:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL
        +QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP Q+GHNMNYQP GIPQHVSQP+FH GTKLPPG+GNSFPP  QSA+PSQP PQS+YQAGGSKL
Subjt:  VQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL

Query:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
        GTEFMNQVG+SKPADRGPWMPGPPENPT PQQLSGPP  PSV GQMGPGNQPR APPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

SwissProt top hits

e value

%identity

Alignment

Q9M9G6 Cleavage stimulating factor 64

3.9e-08

27.94

Show/hide

Query:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPP
        +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V  PQV+ S         Q  +H T  S+IQ  Q       L  Q   PP
Subjt:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPP

Query:  LAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPH
        LA   +Q    P    S   +   + QP S      Q PQ              V QP          PS+  PP   Q ++  A  Q QQ +  +    
Subjt:  LAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPH

Query:  LPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPA-GIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKP
                                     N+ Y     +P +  QP                     S VP Q  P S+ Q GG  +   F  ++    P
Subjt:  LPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPA-GIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKP

Query:  ADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
          +    P         +  S P   V   M P     P   +S +++  LLQQVM+LTPEQ+ LL PEQ+ +V +LQ+ L+Q
Subjt:  ADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G71800.1 cleavage stimulating factor 64

2.8e-09

27.94

Show/hide

Query:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPP
        +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V  PQV+ S         Q  +H T  S+IQ  Q       L  Q   PP
Subjt:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPP

Query:  LAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPH
        LA   +Q    P    S   +   + QP S      Q PQ              V QP          PS+  PP   Q ++  A  Q QQ +  +    
Subjt:  LAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPH

Query:  LPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPA-GIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKP
                                     N+ Y     +P +  QP                     S VP Q  P S+ Q GG  +   F  ++    P
Subjt:  LPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPA-GIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKP

Query:  ADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
          +    P         +  S P   V   M P     P   +S +++  LLQQVM+LTPEQ+ LL PEQ+ +V +LQ+ L+Q
Subjt:  ADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

AT1G73840.1 hydroxyproline-rich glycoprotein family protein

1.8e-64

47.32

Show/hide

Query:  MAGKQVAGT-GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQS-----NI
        MAGKQ+ G  GLP ++AGM+K+QLYDIMSQMKTLI+QN QQA++ILI+NPLLTKALFQAQIMLGMV+PPQV P ++P   Q  Q S    HQS     N+
Subjt:  MAGKQVAGT-GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQS-----NI

Query:  QPTQTP-AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVL---PSAAQPPL
        Q   +   G  S+ E  N      P +++  P  MP+     P  +V   SA   P  +    +G        +S PQ SQV + PP     P++ QPP 
Subjt:  QPTQTP-AGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVL---PSAAQPPL

Query:  LHQPQISTASVQL-QQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIP-QHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPP
         H   I  +S QL QQP+ +   PH+  Q     QSR    P  HQ+   Q G N  +Q  G P QH+SQPM+H G + PP  G    PQ Q  +PSQP 
Subjt:  LHQPQISTASVQL-QQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIP-QHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPP

Query:  PQSLYQAGGSKLGTEFMNQVGTSKPADRGP-WMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAP-PLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQ
            YQ GG   G    NQ+      DRGP WM G  E+  +       P   P Q+GPG  P P P P+S EMEK LLQQVMSLTPEQINLLPPEQRNQ
Subjt:  PQSLYQAGGSKLGTEFMNQVGTSKPADRGP-WMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAP-PLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQ

Query:  VFQLQKILRQ
        V QLQ+ILRQ
Subjt:  VFQLQKILRQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGGAAAGCAAGTTGCTGGCACCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAATCAACTCTATGATATCATGTCTCAAATGAAGACACTGATTGAACAGAA
TCAGCAGCAGGCGAAACAAATTCTCATCCAAAATCCGCTCTTGACCAAAGCTCTTTTCCAGGCGCAGATTATGCTTGGGATGGTTAGGCCTCCTCAGGTAATTCCAAGCA
TCCAGCCTTCAACCTCGCAGCATTCTCAGCCATCAACACATACAACTCATCAGTCAAATATTCAGCCTACTCAAACACCAGCAGGTCAAATAAGTTTGCAAGAACAAACG
AATGCACCACCATTGGCCCCTCCTAGAAAACAATATCAGAATCCACCATCAATGCCTATCTCATCAACTACTCTTCCTACAGTGAACGTTCAGCCTCAGTCAGCACCTCT
GATTCCCCTGCAGACACCACAGCATCCCAAGGGATTTGAGATGCACCAAGCAAATCCCATTTCTGTTCCACAACCCTCTCAAGTTCCAAGCGTACCTCCAGTTCTACCGT
CTGCTGCACAGCCACCTTTACTTCATCAACCCCAGATTTCAACTGCTTCCGTACAGCTGCAGCAGCCATTACAAACAGCTGAAATTCCCCACCTGCCACTACAGGCACCA
CTACCCCCACAGTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCAACAAATGGGGCACAATATGAATTACCAACCTGCCGGCATCCCACAGCATGTTTC
ACAGCCCATGTTTCATGTAGGTACCAAACTTCCTCCTGGTATAGGAAATTCATTTCCCCCTCAAGCACAGTCAGCAGTTCCTAGTCAGCCACCCCCTCAATCATTGTATC
AGGCTGGAGGTTCTAAATTAGGTACAGAGTTCATGAATCAAGTTGGAACTTCAAAGCCTGCAGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCTACACTACCA
CAGCAGCTCTCCGGACCACCACCATCAGTCCCTGGTCAGATGGGCCCTGGCAATCAGCCTCGTCCTGCACCACCGTTGAGCCAAGAAATGGAGAAGATGCTACTTCAACA
AGTCATGAGTCTCACACCGGAACAAATCAATCTCCTGCCTCCAGAGCAAAGAAATCAAGTATTTCAACTACAGAAGATACTGCGCCAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQT
NAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAP
LPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKPADRGPWMPGPPENPTLP
QQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

MS021644 (gene) of Bitter gourd (TR) v1 genome