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MS021660 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021660
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold348:145347..145568
RNA-Seq ExpressionMS021660
SyntenyMS021660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652552.1 hypothetical protein Csa_013579 [Cucumis sativus]5.0e-2381.33Show/hide
Query:  MARLMREMGGGNGSFGVA-GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        MARLMRE+   NGSFG+A G+ Y LFW ALFTLCIIST+IFSCSDGMSK+R NST DVELYGGGCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVA-GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

KAG6572949.1 hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1978.57Show/hide
Query:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGA
        MARL+ E+G  +GSFG++GDI  LF AALFTLCIIS I FSCSDG+SKER NSTADVELYGGGCAAGCGA
Subjt:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGA

KAG6584341.1 hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2787.84Show/hide
Query:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        MARLMRE G  NGSFG+AGDIYLLFWAALFTLCIISTIIFSCSDGMS +  NSTADVELYG GCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

PON38946.1 hypothetical protein PanWU01x14_308610 [Parasponia andersonii]2.7e-1362.67Show/hide
Query:  MARLMREMGGGNGSFGV--AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCG
        M RL RE  G +G  G   +G   + F   L TLCI+STIIFSC+DG+SKE+T S AD ELYGGGCAAGCGAGCG
Subjt:  MARLMREMGGGNGSFGV--AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCG

XP_015882794.1 uncharacterized protein LOC107418606 [Ziziphus jujuba]7.2e-1464.86Show/hide
Query:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        M RL R++   +GS G AG  +++ W AL  +CIIS IIFSC+DG+SKE+T STAD ELYGGGCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU7 Uncharacterized protein2.4e-2381.33Show/hide
Query:  MARLMREMGGGNGSFGVA-GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        MARLMRE+   NGSFG+A G+ Y LFW ALFTLCIIST+IFSCSDGMSK+R NST DVELYGGGCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVA-GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

A0A2P5AQX4 Uncharacterized protein1.3e-1362.67Show/hide
Query:  MARLMREMGGGNGSFGV--AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCG
        M RL RE  G +G  G   +G   + F   L TLCI+STIIFSC+DG+SKE+T S AD ELYGGGCAAGCGAGCG
Subjt:  MARLMREMGGGNGSFGV--AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCG

A0A6P3ZT85 uncharacterized protein LOC1074186063.5e-1464.86Show/hide
Query:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        M RL R++   +GS G AG  +++ W AL  +CIIS IIFSC+DG+SKE+T STAD ELYGGGCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

A0A803R004 Uncharacterized protein1.7e-1361.33Show/hide
Query:  MARLMREMGGGNGSFGVAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        M RL RE+   +G  G     +L+F    L TLCI+STIIFSC+DG+SKE+T S  D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

A0A803R005 Uncharacterized protein1.7e-1361.33Show/hide
Query:  MARLMREMGGGNGSFGVAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA
        M RL RE+   +G  G     +L+F    L TLCI+STIIFSC+DG+SKE+T S  D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREMGGGNGSFGVAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68238.1 unknown protein1.8e-0747.27Show/hide
Query:  GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCG
        G++ L  WAA+    +I+ +IFSCSD  SK  TN     ++ G  CAAGCG GCG
Subjt:  GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCG

AT3G18250.1 Putative membrane lipoprotein6.5e-0542.11Show/hide
Query:  AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGC-AAGCGAGCG
        A  ++ + + A+   CI+S ++FSC+DG+S  R  +T+     GGGC  AGCG GCG
Subjt:  AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGC-AAGCGAGCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGATTGATGAGAGAGATGGGCGGTGGTAATGGAAGTTTTGGTGTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCAC
CATAATTTTCTCTTGCTCCGACGGCATGTCCAAGGAGAGGACTAATTCCACGGCGGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGTGGCGCTGGATGTGGTG
CA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGATTGATGAGAGAGATGGGCGGTGGTAATGGAAGTTTTGGTGTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCAC
CATAATTTTCTCTTGCTCCGACGGCATGTCCAAGGAGAGGACTAATTCCACGGCGGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGTGGCGCTGGATGTGGTG
CA
Protein sequenceShow/hide protein sequence
MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGGGCAAGCGAGCGA