; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021668 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021668
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpre-mRNA-splicing factor SPF27 homolog
Genome locationscaffold348:199628..202999
RNA-Seq ExpressionMS021668
SyntenyMS021668
Gene Ontology termsGO:0002758 - innate immune response-activating signal transduction (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
InterPro domainsIPR008409 - Pre-mRNA-splicing factor SPF27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584331.1 Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.8e-13292.97Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+N+GDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQRAQCLL+HQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVACSQIEGQIQELR EAAE GWNLE N+ENGSVS PVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

XP_004137495.1 pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]7.0e-13393.36Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVAC Q+EGQIQELRREAAE GWNLE N+ENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

XP_008462680.1 PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]4.1e-13393.36Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK+KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVAC Q+EGQIQELRREAAE GWNLE N+ENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

XP_022137683.1 pre-mRNA-splicing factor SPF27 homolog [Momordica charantia]1.8e-14199.61Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHP+LAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

XP_038893573.1 pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida]3.5e-13292.97Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MATN+ NGDILMLEAPPQPSQP W VAADAEV+DALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPPVPK KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVAC Q+EGQI+ELRREA E GWNLE N+ENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

TrEMBL top hitse value%identityAlignment
A0A0A0LQG2 Uncharacterized protein3.4e-13393.36Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVAC Q+EGQIQELRREAAE GWNLE N+ENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

A0A1S3CHH7 pre-mRNA-splicing factor SPF27 homolog2.0e-13393.36Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK+KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVAC Q+EGQIQELRREAAE GWNLE N+ENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

A0A6J1CB04 pre-mRNA-splicing factor SPF27 homolog8.9e-14299.61Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHP+LAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

A0A6J1EDE4 pre-mRNA-splicing factor SPF27 homolog1.9e-13192.58Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+N+GDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQRAQCLL+HQVLRLENLELMSKY PDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVACSQIEGQIQELR EAAE GWNLE N+ENGSVS PVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

A0A6J1KLZ4 pre-mRNA-splicing factor SPF27 homolog2.1e-13092.19Show/hide
Query:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP
        MA N+N+GDILMLEAPP PSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRP
Subjt:  MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQRAQCLL+HQVLRLENLELMSKYG DIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS
        HALSTQWK+LC KNMEIQVACSQIEGQIQELR EAAE GWNLE N+ENGSVS PVS
Subjt:  HALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS

SwissProt top hitse value%identityAlignment
O75934 Pre-mRNA-splicing factor SPF277.0e-2734.98Show/hide
Query:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW
        + A   V+DALPY D  Y  P V+     LVEEE RR ++   ++L  L       FE   ++  E+ER+ A +P   L + RY+L  P   +KND TAW
Subjt:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW

Query:  KQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIE
        ++ +  +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L  KN EI+    Q+E
Subjt:  KQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIE

Query:  GQIQELRREAAENGWNLEANIEN
         +I +++++        EAN EN
Subjt:  GQIQELRREAAENGWNLEANIEN

Q5RAX7 Pre-mRNA-splicing factor SPF277.0e-2735.71Show/hide
Query:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPP-NKKNDETA
        + A   V+DALPY D  Y  P V+     LVEEE RR ++   ++L  L       FE   ++  E+ER+ A +P   L + RY+L  PP   KKND TA
Subjt:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPP-NKKNDETA

Query:  WKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQI
        W++ +  +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L  KN EI+    Q+
Subjt:  WKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQI

Query:  EGQIQELRREAAENGWNLEANIEN
        E +I +++++        EAN EN
Subjt:  EGQIQELRREAAENGWNLEANIEN

Q6PBE2 Pre-mRNA-splicing factor SPF272.9e-2836.24Show/hide
Query:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW
        VA D  V+DALPY D  Y    V+     LVEEE RR ++   ++L  LP      FE   ++  E+ER+ + +P   L + RY+L  P   ++ND TAW
Subjt:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW

Query:  KQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIE
        ++ +  +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L  KN EI+ A  Q+E
Subjt:  KQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIE

Query:  GQIQELRREAAENGWNLE
         ++ +L+  + EN  N+E
Subjt:  GQIQELRREAAENGWNLE

Q949S9 Pre-mRNA-splicing factor SPF27 homolog5.5e-8865.31Show/hide
Query:  SNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPL
        +NNGD+LMLEA P+ ++P W  AA+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRS K+PADFLKDLPP+PK  F++ P+L +EYERVRAG+PPV +
Subjt:  SNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPL

Query:  DV-ARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHAL
        D  +RYKLE PP NK+ND+ AWKQ LQ+ Q  L+ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEKVNRERK+HQQ  +YEL+AL
Subjt:  DV-ARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHAL

Query:  STQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIEN
        S +W+ LC KNMEIQ AC+ +E QI   ++EAAE GWNLE  +EN
Subjt:  STQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIEN

Q9D287 Pre-mRNA-splicing factor SPF277.0e-2734.98Show/hide
Query:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW
        + A   V+DALPY D  Y  P V+     LVEEE RR ++   ++L  L       FE   ++  E+ER+ A +P   L + RY+L  P   +KND TAW
Subjt:  VAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW

Query:  KQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIE
        ++ +  +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L  KN EI+    Q+E
Subjt:  KQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIE

Query:  GQIQELRREAAENGWNLEANIEN
         +I +++++        EAN EN
Subjt:  GQIQELRREAAENGWNLEANIEN

Arabidopsis top hitse value%identityAlignment
AT3G18165.1 modifier of snc1,43.9e-8965.31Show/hide
Query:  SNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPL
        +NNGD+LMLEA P+ ++P W  AA+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRS K+PADFLKDLPP+PK  F++ P+L +EYERVRAG+PPV +
Subjt:  SNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPL

Query:  DV-ARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHAL
        D  +RYKLE PP NK+ND+ AWKQ LQ+ Q  L+ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEKVNRERK+HQQ  +YEL+AL
Subjt:  DV-ARYKLETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHAL

Query:  STQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIEN
        S +W+ LC KNMEIQ AC+ +E QI   ++EAAE GWNLE  +EN
Subjt:  STQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGWNLEANIEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTAACAGCAATAACGGAGACATCCTAATGCTCGAAGCTCCACCACAGCCATCTCAACCAACTTGGCATGTTGCTGCAGATGCGGAGGTAATCGACGCCTTGCC
CTACATCGACGACGACTATGCCGATCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTTCAAGAGACCCGCCGACTTTCTCAAAGACT
TGCCTCCTGTTCCCAAGGTCAAATTCGAGGATCACCCAATGCTTGCTAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAGTGCCTCTCGATGTTGCAAGATATAAA
TTAGAGACACCGCCTCCAAATAAAAAGAACGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCTTACTACGTCATCAAGTGCTGAGGCTGGAAAATTTGGA
ACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTTTATCGAGAATGCAAAAGTTAGCTCAAGAACAGAATGAGAAGATTGAAA
AGGTGAACCGTGAAAGGAAATTTCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGATCTTTGCCACAAAAATATGGAAATCCAAGTGGCA
TGCTCTCAAATCGAGGGTCAAATCCAGGAACTAAGGAGAGAGGCAGCAGAAAATGGCTGGAATTTGGAAGCCAATATAGAGAATGGTTCTGTTTCTCTTCCAGTGTCA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTAACAGCAATAACGGAGACATCCTAATGCTCGAAGCTCCACCACAGCCATCTCAACCAACTTGGCATGTTGCTGCAGATGCGGAGGTAATCGACGCCTTGCC
CTACATCGACGACGACTATGCCGATCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTTCAAGAGACCCGCCGACTTTCTCAAAGACT
TGCCTCCTGTTCCCAAGGTCAAATTCGAGGATCACCCAATGCTTGCTAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAGTGCCTCTCGATGTTGCAAGATATAAA
TTAGAGACACCGCCTCCAAATAAAAAGAACGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCTTACTACGTCATCAAGTGCTGAGGCTGGAAAATTTGGA
ACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTTTATCGAGAATGCAAAAGTTAGCTCAAGAACAGAATGAGAAGATTGAAA
AGGTGAACCGTGAAAGGAAATTTCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGATCTTTGCCACAAAAATATGGAAATCCAAGTGGCA
TGCTCTCAAATCGAGGGTCAAATCCAGGAACTAAGGAGAGAGGCAGCAGAAAATGGCTGGAATTTGGAAGCCAATATAGAGAATGGTTCTGTTTCTCTTCCAGTGTCA
Protein sequenceShow/hide protein sequence
MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSFKRPADFLKDLPPVPKVKFEDHPMLAREYERVRAGRPPVPLDVARYK
LETPPPNKKNDETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVA
CSQIEGQIQELRREAAENGWNLEANIENGSVSLPVS