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MS021689 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021689
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnon-specific lipid-transfer protein-like protein At2g13820
Genome locationscaffold348:338432..338770
RNA-Seq ExpressionMS021689
SyntenyMS021689
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584311.1 Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2555.17Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQA---GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDA
        MAS+ F+ FLLL ISS +FV FS+D    + G ++   G LPPC++++L CQP+IK P NP PACC PLKE+L  D  CLCSFF+N ++LK LNV+QS A
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQA---GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDA

Query:  LKLPAACGGKADTSKC
        L+LP  CG + D S C
Subjt:  LKLPAACGGKADTSKC

XP_008465997.1 PREDICTED: lipid transfer-like protein VAS [Cucumis melo]4.3e-2657.89Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
        MAS T L F  LI+     V FS+D D    G ++G++P C+QKILPCQPFIK P NPS  CC+PLKEML  D  CLCSFF++  +LK LNVTQS ALKL
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL

Query:  PAACG-GKADTSKC
        P ACG    D S C
Subjt:  PAACG-GKADTSKC

XP_022137121.1 non-specific lipid-transfer protein-like protein At2g13820 [Momordica charantia]1.5e-58100Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
        MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL

Query:  PAACGGKADTSKC
        PAACGGKADTSKC
Subjt:  PAACGGKADTSKC

XP_023520350.1 protein YLS3-like [Cucurbita pepo subsp. pepo]4.8e-2555.17Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQA---GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDA
        MAS+ F  FLLL ISS +FV FS+D    + G ++   G+LPPC++++L CQP+IK P NP PACC PLKE+L  D  CLCSFF+N ++LK LNV+QS A
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQA---GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDA

Query:  LKLPAACGGKADTSKC
        L+LP  CG + D S C
Subjt:  LKLPAACGGKADTSKC

XP_038895529.1 non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida]1.8e-2762.28Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
        MAS  F  FLLL ISS IF  FS+       G  +  +PPC+QKILPCQPFIK P NP P CC+PLKEMLA D  CLCSFF+NA++LK LNVTQS ALKL
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL

Query:  PAACG-GKADTSKC
        P ACG    D S C
Subjt:  PAACG-GKADTSKC

TrEMBL top hitse value%identityAlignment
A0A1S3CQ75 lipid transfer-like protein VAS2.1e-2657.89Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
        MAS T L F  LI+     V FS+D D    G ++G++P C+QKILPCQPFIK P NPS  CC+PLKEML  D  CLCSFF++  +LK LNVTQS ALKL
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL

Query:  PAACG-GKADTSKC
        P ACG    D S C
Subjt:  PAACG-GKADTSKC

A0A5D3BJY6 Lipid transfer-like protein VAS2.6e-2461.05Show/hide
Query:  VVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACG-GKADTSKC
        V FS+D D    G ++G++P C+QKILPCQPFIK P NPS  CC+PLKEML  D  CLCSFF++  +LK LNVTQS ALKLP ACG    D S C
Subjt:  VVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACG-GKADTSKC

A0A6A1VMJ6 Lipid transfer-like protein VAS5.7e-2453.21Show/hide
Query:  LLLIISSHIFVVFSE-DRDWIVV----GHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAAC
        L  ++SS + V FSE D    ++    G     L PCIQK++PCQ ++KPPSNP  +CC+ LKEM+ADDP CLC  FD+A  L+ LNVTQ +ALKLP AC
Subjt:  LLLIISSHIFVVFSE-DRDWIVV----GHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAAC

Query:  GGKADTSKC
        G  AD S+C
Subjt:  GGKADTSKC

A0A6J1C5K8 non-specific lipid-transfer protein-like protein At2g138207.1e-59100Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
        MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKL

Query:  PAACGGKADTSKC
        PAACGGKADTSKC
Subjt:  PAACGGKADTSKC

A0A6J1E8R9 protein YLS3-like3.9e-2555.17Show/hide
Query:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQA---GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDA
        MAS+ F+ FLLL ISS +FV FS+D    + G ++   G LPPC++++L CQP+IK P NP PACC PLKE+L  D  CLCSFF N ++LK LNV+QS A
Subjt:  MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQA---GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDA

Query:  LKLPAACGGKADTSKC
        L+LP  CG   D S C
Subjt:  LKLPAACGGKADTSKC

SwissProt top hitse value%identityAlignment
B3H587 Non-specific lipid transfer protein GPI-anchored 89.1e-1139.73Show/hide
Query:  CIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        C+ K++PCQP+I     P P CC P+K++   D +CLC+ F +  LL+ L +T+ +A+K+  +CG   D S C
Subjt:  CIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

Q1PFD8 Non-specific lipid transfer protein GPI-anchored 97.2e-1651.25Show/hide
Query:  QLPPCIQKILPCQPFI---KPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        QL  C+QK+LPCQP+I    PP  P P+CC P+KE++  D  CLC  F+N ++LK LN+T+ +AL LP ACG   D S C
Subjt:  QLPPCIQKILPCQPFI---KPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

Q9FFY3 Non-specific lipid transfer protein GPI-anchored 304.4e-0528.75Show/hide
Query:  GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDN--AQLLKGLNVTQSDALKLPAACGGKADTSKC
        GQ   C+ ++ PC  ++         CC PLK ++ ++P CLC    N  +   +   +  +DA  LPA CG   +   C
Subjt:  GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDN--AQLLKGLNVTQSDALKLPAACGGKADTSKC

Q9LE56 Non-specific lipid transfer protein GPI-anchored 31.5e-1852.7Show/hide
Query:  PCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        PCIQK++PCQP++   + P   CC+PL E++A D  CLC+ F+N  +LK LN+T+ +AL LP ACG KAD S C
Subjt:  PCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

Arabidopsis top hitse value%identityAlignment
AT1G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.1e-1952.7Show/hide
Query:  PCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        PCIQK++PCQP++   + P   CC+PL E++A D  CLC+ F+N  +LK LN+T+ +AL LP ACG KAD S C
Subjt:  PCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

AT1G73550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.5e-1239.73Show/hide
Query:  CIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        C+ K++PCQP+I     P P CC P+K++   D +CLC+ F +  LL+ L +T+ +A+K+  +CG   D S C
Subjt:  CIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

AT1G73550.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.5e-1239.73Show/hide
Query:  CIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        C+ K++PCQP+I     P P CC P+K++   D +CLC+ F +  LL+ L +T+ +A+K+  +CG   D S C
Subjt:  CIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.1e-1751.25Show/hide
Query:  QLPPCIQKILPCQPFI---KPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC
        QL  C+QK+LPCQP+I    PP  P P+CC P+KE++  D  CLC  F+N ++LK LN+T+ +AL LP ACG   D S C
Subjt:  QLPPCIQKILPCQPFI---KPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADTSKC

AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.1e-0628.75Show/hide
Query:  GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDN--AQLLKGLNVTQSDALKLPAACGGKADTSKC
        GQ   C+ ++ PC  ++         CC PLK ++ ++P CLC    N  +   +   +  +DA  LPA CG   +   C
Subjt:  GQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDN--AQLLKGLNVTQSDALKLPAACGGKADTSKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCGCTACATTCCTCCCCTTCCTCCTCTTGATTATTTCTTCTCACATTTTCGTCGTATTCTCTGAAGATCGCGACTGGATCGTGGTCGGTCATCAGGCCGGCCA
ACTTCCGCCCTGCATACAGAAGATTCTTCCCTGTCAACCGTTCATCAAGCCGCCGTCCAATCCGTCGCCGGCGTGCTGTGTGCCGCTGAAGGAGATGCTGGCCGACGATC
CCAACTGTCTCTGCTCCTTCTTCGATAACGCGCAGCTGTTGAAGGGCCTCAATGTCACTCAGAGCGACGCCTTGAAGCTTCCCGCTGCCTGCGGCGGCAAGGCTGATACT
TCCAAGTGC
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCGCTACATTCCTCCCCTTCCTCCTCTTGATTATTTCTTCTCACATTTTCGTCGTATTCTCTGAAGATCGCGACTGGATCGTGGTCGGTCATCAGGCCGGCCA
ACTTCCGCCCTGCATACAGAAGATTCTTCCCTGTCAACCGTTCATCAAGCCGCCGTCCAATCCGTCGCCGGCGTGCTGTGTGCCGCTGAAGGAGATGCTGGCCGACGATC
CCAACTGTCTCTGCTCCTTCTTCGATAACGCGCAGCTGTTGAAGGGCCTCAATGTCACTCAGAGCGACGCCTTGAAGCTTCCCGCTGCCTGCGGCGGCAAGGCTGATACT
TCCAAGTGC
Protein sequenceShow/hide protein sequence
MASATFLPFLLLIISSHIFVVFSEDRDWIVVGHQAGQLPPCIQKILPCQPFIKPPSNPSPACCVPLKEMLADDPNCLCSFFDNAQLLKGLNVTQSDALKLPAACGGKADT
SKC