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MS021693 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021693
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold348:375421..375639
RNA-Seq ExpressionMS021693
SyntenyMS021693
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572977.1 NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1781.54Show/hide
Query:  NRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRP-PAAFREMTRQISRSPLGISGRPIS
        NRE MEK    FPVHSQVRKIKEESETIIDW  GQPEIRP  AAFR+M R ISRSPLGISGRPIS
Subjt:  NRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRP-PAAFREMTRQISRSPLGISGRPIS

KAG6584306.1 DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1981.82Show/hide
Query:  RMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIR-PPAAFREMTRQISRSPLGISGRPISVGDS
        RMEK    FPVHSQVRKIKEESE IIDWR GQPEI+ PPAAFRE+ RQISRSPLG+SGRPISVG+S
Subjt:  RMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIR-PPAAFREMTRQISRSPLGISGRPISVGDS

KAG7012158.1 hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-2082.61Show/hide
Query:  NRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRP-PAAFREMTRQISRSPLGISGRPISVGDS
        NRE MEK    FPVHSQVRKIKEESETIIDW  GQPEIRP  AAFR+M R ISRSPLGISGRPISVGDS
Subjt:  NRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRP-PAAFREMTRQISRSPLGISGRPISVGDS

KGN64190.1 hypothetical protein Csa_013611, partial [Cucumis sativus]1.8e-1781.25Show/hide
Query:  MEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        MEK E  FPVHSQVRKIKEES+T IDWR GQPEIRPP A     RQISRSPLGISGRPISVGDS
Subjt:  MEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

TYJ99047.1 hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]4.8e-1876.06Show/hide
Query:  EMANRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        +M  R   EK E  FPVHSQVRKIKEESETI+DWR GQPEIRPP A     RQISRSPLGISGRPISVGDS
Subjt:  EMANRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

TrEMBL top hitse value%identityAlignment
A0A0A0LQJ2 Uncharacterized protein8.8e-1881.25Show/hide
Query:  MEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        MEK E  FPVHSQVRKIKEES+T IDWR GQPEIRPP A     RQISRSPLGISGRPISVGDS
Subjt:  MEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

A0A314ZBL8 Uncharacterized protein3.5e-1477.19Show/hide
Query:  FPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        FPVHSQVRKIK+ESE IIDW  G+PE+RP      MTRQISRSPLGIS RPISVGDS
Subjt:  FPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

A0A498I238 Uncharacterized protein7.7e-1467.14Show/hide
Query:  NRERMEK--TERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        N  +ME+   E  FPVHSQVRKIK+ES+  IDW  G+PE+R P  F+E+TRQISRSPLGIS RPISVGDS
Subjt:  NRERMEK--TERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

A0A540KEP9 Uncharacterized protein7.7e-1467.14Show/hide
Query:  NRERMEK--TERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        N  +ME+   E  FPVHSQVRKIK+ES+  IDW  G+PE+R P  F+E+TRQISRSPLGIS RPISVGDS
Subjt:  NRERMEK--TERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

A0A5D3BIV4 Uncharacterized protein2.3e-1876.06Show/hide
Query:  EMANRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS
        +M  R   EK E  FPVHSQVRKIKEESETI+DWR GQPEIRPP A     RQISRSPLGISGRPISVGDS
Subjt:  EMANRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67920.1 unknown protein1.9e-0450Show/hide
Query:  VHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGD
        +HSQV KIK+E E I      QPE+R   +     RQ SRSPLG+  R ISVG+
Subjt:  VHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTTGAGATGGCGAACAGAGAGAGGATGGAGAAGACGGAGCGCTCGTTTCCTGTTCATAGCCAAGTGAGGAAGATCAAGGAGGAATCGGAGACGATCATCGATTGGAG
ATCTGGACAGCCGGAGATCAGACCGCCGGCCGCCTTCCGGGAGATGACTCGCCAGATCTCCCGCTCGCCGCTTGGCATCTCCGGCCGACCCATCTCCGTCGGCGATTCC
mRNA sequenceShow/hide mRNA sequence
TTTTTTGAGATGGCGAACAGAGAGAGGATGGAGAAGACGGAGCGCTCGTTTCCTGTTCATAGCCAAGTGAGGAAGATCAAGGAGGAATCGGAGACGATCATCGATTGGAG
ATCTGGACAGCCGGAGATCAGACCGCCGGCCGCCTTCCGGGAGATGACTCGCCAGATCTCCCGCTCGCCGCTTGGCATCTCCGGCCGACCCATCTCCGTCGGCGATTCC
Protein sequenceShow/hide protein sequence
FFEMANRERMEKTERSFPVHSQVRKIKEESETIIDWRSGQPEIRPPAAFREMTRQISRSPLGISGRPISVGDS