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MS021710 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021710
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProline-rich receptor-like protein kinase PERK2
Genome locationscaffold566:41982..42338
RNA-Seq ExpressionMS021710
SyntenyMS021710
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044950 - Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607661.1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2965.55Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGH AVIVIVFISLG+C  FF    AA  C  IKK+ KK C   EVAEVIHVDGHRK+HE  A     HG QAV+VTIED+V IDEI KKKEH  G G L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHE G NSS+++V PSS
Subjt:  HGKHEVGGNSSSMEVAPSS

TYK04341.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]3.4e-2965.04Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        +GH A+IVIVFISLG+C FF A     +CCF IKK+KKKSC  QEV E I +DGHRK+HE  A    GHG QA+VVTIED+V IDEIVKKKEHG GHG L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGG----NSSSMEVAPSS
        HGK   GG    NS++MEVA SS
Subjt:  HGKHEVGG----NSSSMEVAPSS

XP_022154444.1 uncharacterized protein LOC111021715 [Momordica charantia]2.4e-5997.48Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGHPAVIVIVFISLGACFFFFAL PAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDE++KKKEHGVGHGLL
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHEVGGNSSSMEVAPSS
Subjt:  HGKHEVGGNSSSMEVAPSS

XP_022926281.1 uncharacterized protein LOC111433458 [Cucurbita moschata]5.7e-2964.71Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGH AVIVIVFISLG+C  FF    AA  C  IKK+ KK C   EVAEVIHVDGHRK+HE  A     HG QAV+VTIED+V +DEI KKKEH  G G L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHE G NSS+++V PSS
Subjt:  HGKHEVGGNSSSMEVAPSS

XP_023521688.1 uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo]9.8e-2964.71Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGH AVIVIVFISLG+C  FF    AA  C  IKK+ KK C   +VAEVIHVDGHRK+HE  A     HG QAV+VTIED+V IDEI KKKEH  G G L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHE G NSS+++V PSS
Subjt:  HGKHEVGGNSSSMEVAPSS

TrEMBL top hitse value%identityAlignment
A0A0A0K4D1 Uncharacterized protein2.3e-3167.48Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        +GH A+IVIVFISLG+C FF A   AA+CCF IKK+KKKSC  QEV E IH+DGHRK+HE  A    GHG QAVVVTIED++ IDEIVKKKEHG GHG L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGG----NSSSMEVAPSS
        HGK   GG    NS++MEVA SS
Subjt:  HGKHEVGG----NSSSMEVAPSS

A0A5D3BXC9 Proline-rich receptor-like protein kinase PERK21.6e-2965.04Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        +GH A+IVIVFISLG+C FF A     +CCF IKK+KKKSC  QEV E I +DGHRK+HE  A    GHG QA+VVTIED+V IDEIVKKKEHG GHG L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGG----NSSSMEVAPSS
        HGK   GG    NS++MEVA SS
Subjt:  HGKHEVGG----NSSSMEVAPSS

A0A6J1DM43 uncharacterized protein LOC1110217151.2e-5997.48Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGHPAVIVIVFISLGACFFFFAL PAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDE++KKKEHGVGHGLL
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHEVGGNSSSMEVAPSS
Subjt:  HGKHEVGGNSSSMEVAPSS

A0A6J1EEE4 uncharacterized protein LOC1114334582.8e-2964.71Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGH AVIVIVFISLG+C  FF    AA  C  IKK+ KK C   EVAEVIHVDGHRK+HE  A     HG QAV+VTIED+V +DEI KKKEH  G G L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHE G NSS+++V PSS
Subjt:  HGKHEVGGNSSSMEVAPSS

A0A6J1J036 uncharacterized protein LOC1114807022.4e-2864.71Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        NGH AVIVIVFISLG+C  FF    AA  C  IKK+ KK C   EVAEVI VDGHRK+HE  A     HG QAV VTIED+V IDEI KKKEH  G G L
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVAPSS
        HGKHE G NSS+++V PSS
Subjt:  HGKHEVGGNSSSMEVAPSS

SwissProt top hitse value%identityAlignment
C1PGW0 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 65.1e-0434.41Show/hide
Query:  AVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCI---DEIVKKKEHG
        A I IVF+S G C F   +    +CC I K K  K+    E  E++HVD H ++HE      G +G + V +T++D++ +   +E VK ++ G
Subjt:  AVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCI---DEIVKKKEHG

C1PGW1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A5.2e-0936.67Show/hide
Query:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL
        + H   IV++F+S G   FF A   AA+ CF+ KKKKK      + AE IH D HRK+ E      G HG +  ++++ED++ I+E +KK E        
Subjt:  NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLL

Query:  HGKHEVGGNSSSMEVA-PSS
         G H   GN+ +++   PSS
Subjt:  HGKHEVGGNSSSMEVA-PSS

Q8LBX7 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 69.9e-0839.6Show/hide
Query:  VIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVK------KKEHGVGHGL
        V+V+VF+SLG C  F A F A +  F+IKK+ +K   H+E +E + VD H K+ EA     G +G ++VV+++ED+V I++ +K      KK+ GVG  +
Subjt:  VIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVK------KKEHGVGHGL

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT1G43790.1 tracheary element differentiation-related 67.0e-0939.6Show/hide
Query:  VIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVK------KKEHGVGHGL
        V+V+VF+SLG C  F A F A +  F+IKK+ +K   H+E +E + VD H K+ EA     G +G ++VV+++ED+V I++ +K      KK+ GVG  +
Subjt:  VIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVK------KKEHGVGHGL

Query:  L
        +
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGGCCACCCAGCAGTAATCGTGATCGTTTTCATTTCTCTGGGCGCATGCTTTTTCTTCTTTGCCCTCTTCCCAGCTGCAATTTGCTGTTTCATCATCAAAAAGAAAAA
GAAGAAGTCTTGTGGTCACCAAGAAGTTGCAGAAGTGATCCATGTTGATGGGCACAGGAAGATCCACGAAGCCGCTGCGGGCGGCGGCGGTGGCCATGGGCCGCAGGCGG
TGGTGGTGACGATCGAGGATGAAGTCTGTATCGACGAGATAGTGAAGAAGAAAGAGCATGGGGTTGGCCACGGATTATTGCATGGCAAGCATGAAGTAGGAGGGAATTCT
AGCTCAATGGAAGTAGCACCTTCTTCT
mRNA sequenceShow/hide mRNA sequence
AATGGCCACCCAGCAGTAATCGTGATCGTTTTCATTTCTCTGGGCGCATGCTTTTTCTTCTTTGCCCTCTTCCCAGCTGCAATTTGCTGTTTCATCATCAAAAAGAAAAA
GAAGAAGTCTTGTGGTCACCAAGAAGTTGCAGAAGTGATCCATGTTGATGGGCACAGGAAGATCCACGAAGCCGCTGCGGGCGGCGGCGGTGGCCATGGGCCGCAGGCGG
TGGTGGTGACGATCGAGGATGAAGTCTGTATCGACGAGATAGTGAAGAAGAAAGAGCATGGGGTTGGCCACGGATTATTGCATGGCAAGCATGAAGTAGGAGGGAATTCT
AGCTCAATGGAAGTAGCACCTTCTTCT
Protein sequenceShow/hide protein sequence
NGHPAVIVIVFISLGACFFFFALFPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHEAAAGGGGGHGPQAVVVTIEDEVCIDEIVKKKEHGVGHGLLHGKHEVGGNS
SSMEVAPSS