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MS021750 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021750
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCP12 domain-containing family protein
Genome locationscaffold1:168624..168833
RNA-Seq ExpressionMS021750
SyntenyMS021750
Gene Ontology termsGO:0080153 - negative regulation of reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR003823 - Domain of unknown function CP12
IPR039314 - Calvin cycle protein CP12-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608664.1 Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2586.11Show/hide
Query:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYFCRDNP LDECQIY+E
Subjt:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

KAG7037981.1 Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2586.11Show/hide
Query:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYFCRDNP LDECQIY+E
Subjt:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

XP_022157376.1 calvin cycle protein CP12-3, chloroplastic [Momordica charantia]4.3e-32100Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

XP_022982015.1 calvin cycle protein CP12-3, chloroplastic [Cucurbita maxima]1.0e-2586.11Show/hide
Query:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYFCRDNP LDECQIY+E
Subjt:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

XP_023525595.1 calvin cycle protein CP12-3, chloroplastic [Cucurbita pepo subsp. pepo]1.0e-2586.11Show/hide
Query:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYFCRDNP LDECQIY+E
Subjt:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

TrEMBL top hitse value%identityAlignment
A0A2C9VX76 CP12 domain-containing protein1.8e-2375.71Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKK++EAKEVCEGD+TSDECKVAWD VEE+SQAKA F  KL+ QDPLEYFC+DNP+ DEC++Y++
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

A0A4U5MZB4 CP12 domain-containing family protein1.3e-2375.71Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKV+EAKEVCEGDETSDECKVAWD VEE+SQAKA F  +L+ QDPLEY+C+DNP+ DEC++Y++
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

A0A6J1DXW2 calvin cycle protein CP12-3, chloroplastic2.1e-32100Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

A0A6J1FK63 calvin cycle protein CP12-3, chloroplastic4.9e-2686.11Show/hide
Query:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYFCRDNP LDECQIY+E
Subjt:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

A0A6J1J1E6 calvin cycle protein CP12-3, chloroplastic4.9e-2686.11Show/hide
Query:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE
        LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYFCRDNP LDECQIY+E
Subjt:  LTEMIEKKVMEAKEVCEGDET--SDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE

SwissProt top hitse value%identityAlignment
A6Q0K5 Calvin cycle protein CP12, chloroplastic4.0e-0943.24Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQ----DPLEYFCRDNPDLDECQIYQE
        L + ++  V EA++ C    TS +C VAWD VEELS A +H    ++      DPLE FC+D PD DEC++Y++
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQ----DPLEYFCRDNPDLDECQIYQE

O22914 Calvin cycle protein CP12-1, chloroplastic1.3e-1250Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIY
        ++E +EK + EAKE C  D  S EC  AWD VEELS A +H   K +    DPLE +C DNP+ DEC+ Y
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIY

Q9C9K2 Calvin cycle protein CP12-3, chloroplastic1.3e-1862.5Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIYQE
        L+EMIE+KV EA EVCE +E S+EC+VAWD VEE+SQA+A    KL+  NQDPLE FC++NP+ DEC+IY++
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIYQE

Q9LZP9 Calvin cycle protein CP12-2, chloroplastic2.3e-1247.14Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHF--LHKLQNQDPLEYFCRDNPDLDECQIY
        +++++EK + EA+E C GD  S EC  AWD VEELS A +H     K    DPLE +C+DNP+ +EC+ Y
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHF--LHKLQNQDPLEYFCRDNPDLDECQIY

Arabidopsis top hitse value%identityAlignment
AT1G76560.1 CP12 domain-containing protein 38.9e-2062.5Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIYQE
        L+EMIE+KV EA EVCE +E S+EC+VAWD VEE+SQA+A    KL+  NQDPLE FC++NP+ DEC+IY++
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIYQE

AT2G47400.1 CP12 domain-containing protein 19.5e-1450Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIY
        ++E +EK + EAKE C  D  S EC  AWD VEELS A +H   K +    DPLE +C DNP+ DEC+ Y
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQ--NQDPLEYFCRDNPDLDECQIY

AT3G62410.1 CP12 domain-containing protein 21.6e-1347.14Show/hide
Query:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHF--LHKLQNQDPLEYFCRDNPDLDECQIY
        +++++EK + EA+E C GD  S EC  AWD VEELS A +H     K    DPLE +C+DNP+ +EC+ Y
Subjt:  LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHF--LHKLQNQDPLEYFCRDNPDLDECQIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGACGGAAATGATTGAGAAGAAGGTGATGGAAGCAAAGGAGGTGTGCGAGGGGGACGAGACCTCAGATGAGTGCAAGGTGGCGTGGGACCTGGTGGAGGAGCTCAGCCA
AGCCAAAGCCCATTTCCTACACAAACTTCAGAACCAAGATCCACTAGAGTACTTCTGTCGAGACAATCCCGACCTTGACGAGTGTCAAATTTACCAGGAA
mRNA sequenceShow/hide mRNA sequence
CTGACGGAAATGATTGAGAAGAAGGTGATGGAAGCAAAGGAGGTGTGCGAGGGGGACGAGACCTCAGATGAGTGCAAGGTGGCGTGGGACCTGGTGGAGGAGCTCAGCCA
AGCCAAAGCCCATTTCCTACACAAACTTCAGAACCAAGATCCACTAGAGTACTTCTGTCGAGACAATCCCGACCTTGACGAGTGTCAAATTTACCAGGAA
Protein sequenceShow/hide protein sequence
LTEMIEKKVMEAKEVCEGDETSDECKVAWDLVEELSQAKAHFLHKLQNQDPLEYFCRDNPDLDECQIYQE