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MS021769 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021769
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLate embryogenesis abundant protein, group 6
Genome locationscaffold1:257614..257907
RNA-Seq ExpressionMS021769
SyntenyMS021769
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]9.9e-2776.04Show/hide
Query:  EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        EEQ Q Q+      MGK  EEKA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+G+PEV+P TIDV T QGLI
Subjt:  EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]5.4e-2572.92Show/hide
Query:  EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        EEQ Q Q+      MGK  EEKA VE+LLPLESSPYVKYKDLEEYKR+GYG EGHL PKPNQ   GGGTDAPTLSG+G PEV+P TID+ T QGLI
Subjt:  EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]2.3e-4498.98Show/hide
Query:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLIP
        SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKP TIDVATNQGLIP
Subjt:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]3.4e-2774.23Show/hide
Query:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        SEE+ Q Q Q     + + +EEK SVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+GFPEVKP TID  TN GL+
Subjt:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]6.8e-2875.26Show/hide
Query:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        SEE+ Q Q Q     + + +EEKASVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+GFPEVKP TID  TN GL+
Subjt:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein3.4e-2580.52Show/hide
Query:  EEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        EEKA VE+LLPLESSPYVKYKDLEEYKR+GYG EGHL PKPNQ   GGGTDAPTLSG+G PEV+P TID+ T QGLI
Subjt:  EEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

A0A438ET15 Uncharacterized protein1.1e-1560.76Show/hide
Query:  KREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGL
        +R EEKAS    LP+ESSPY+KY DLE+YKR+GYG EGHLEPKPN  QGGGGTDAPTL+G    +     +D A   G+
Subjt:  KREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGL

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein4.8e-2776.04Show/hide
Query:  EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        EEQ Q Q+      MGK  EEKA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+G+PEV+P TIDV T QGLI
Subjt:  EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

A0A6J1C2A9 uncharacterized protein LOC1110076211.1e-4498.98Show/hide
Query:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLIP
        SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKP TIDVATNQGLIP
Subjt:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLIP

A0A6J1FA12 uncharacterized protein LOC1114436391.6e-2774.23Show/hide
Query:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI
        SEE+ Q Q Q     + + +EEK SVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+GFPEVKP TID  TN GL+
Subjt:  SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 61.1e-0745.71Show/hide
Query:  QVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSG
        Q +P T     +E +   +E +     +PY+ Y +LE+YK +GYGA+GH EPK   G GGG TDAPT SG
Subjt:  QVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSG

AT2G23110.2 Late embryogenesis abundant protein, group 61.1e-0745.71Show/hide
Query:  QVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSG
        Q +P T     +E +   +E +     +PY+ Y +LE+YK +GYGA+GH EPK   G GGG TDAPT SG
Subjt:  QVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSG

AT2G23120.1 Late embryogenesis abundant protein, group 61.2e-0649.25Show/hide
Query:  PQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSG
        P T T  +++ E+    + LP + SPY+    LE+YK + YGAEGH EP P  G GGG TDAPT SG
Subjt:  PQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 62.1e-1148.61Show/hide
Query:  KASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQ
        K+  ++ LPLE+SPY KY+D+E+YK+  YG  GH + KP  G GGG TDAPT SG    +  P  ID A  +
Subjt:  KASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCGAAGAGCAGGCGCAGGCGCAGGTGCAGCCGCAGACGCGGACGATGGGGAAGAGGGAAGAAGAGAAGGCGTCGGTGGAGGAATTGCTGCCGCTGGAGAGCAGTCCGTA
CGTGAAATACAAAGACTTGGAAGAGTACAAAAGGGAAGGGTATGGGGCGGAGGGGCATCTGGAGCCGAAGCCCAACCAGGGGCAGGGCGGCGGCGGCACCGACGCCCCCA
CCTTGTCCGGCGCCGGCTTCCCGGAGGTCAAGCCCTTCACCATCGACGTCGCCACCAACCAAGGCCTCATCCCC
mRNA sequenceShow/hide mRNA sequence
AGCGAAGAGCAGGCGCAGGCGCAGGTGCAGCCGCAGACGCGGACGATGGGGAAGAGGGAAGAAGAGAAGGCGTCGGTGGAGGAATTGCTGCCGCTGGAGAGCAGTCCGTA
CGTGAAATACAAAGACTTGGAAGAGTACAAAAGGGAAGGGTATGGGGCGGAGGGGCATCTGGAGCCGAAGCCCAACCAGGGGCAGGGCGGCGGCGGCACCGACGCCCCCA
CCTTGTCCGGCGCCGGCTTCCCGGAGGTCAAGCCCTTCACCATCGACGTCGCCACCAACCAAGGCCTCATCCCC
Protein sequenceShow/hide protein sequence
SEEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPFTIDVATNQGLIP