; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021772 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021772
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-H2 finger protein ATL80-like
Genome locationscaffold1:270444..271007
RNA-Seq ExpressionMS021772
SyntenyMS021772
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608649.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]5.8e-9289.78Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLA  NSS+ SD+ EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDGGG +STRPPPPPASNKGLKKKILRSLPK+TFTAEFA QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILV +QCQKCGGFPASSSSN GTESRVK+ GEDK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

XP_004145558.1 RING-H2 finger protein ATL8 [Cucumis sativus]4.4e-9290.86Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLAG NSSATSD+ EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDGGG  STRPPPPPASNKGLKKKILRSLPK+TFTAEF+ QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFH++CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVKE G+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

XP_008453009.1 PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]9.8e-9290.86Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLAG NSSATSD+ EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDG G  STRPPPPPASNKGLKKKILRSLPK+TFTAEF+ QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVKE G+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

XP_022941514.1 RING-H2 finger protein ATL80-like [Cucurbita moschata]7.5e-9289.78Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MR FRYLA  NSS+ SD+ EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDGGG +STRPPPPPASNKGLKKKILRSLPK+TFTAEFA QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVK+ GEDK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

XP_023523429.1 RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo]7.5e-9289.78Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLA  NSS+ SD+ EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GD GG +STRPPPPPASNKGLKKKILRSLPK+TFTAEFA QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVK+ GEDK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y2 RING-type domain-containing protein2.1e-9290.86Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLAG NSSATSD+ EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDGGG  STRPPPPPASNKGLKKKILRSLPK+TFTAEF+ QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFH++CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVKE G+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

A0A1S3BWC1 RING-H2 finger protein ATL804.8e-9290.86Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLAG NSSATSD+ EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDG G  STRPPPPPASNKGLKKKILRSLPK+TFTAEF+ QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVKE G+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

A0A5A7VGL3 RING-H2 finger protein ATL804.8e-9290.86Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLAG NSSATSD+ EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDG G  STRPPPPPASNKGLKKKILRSLPK+TFTAEF+ QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVKE G+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

A0A6J1FNK0 RING-H2 finger protein ATL80-like3.6e-9289.78Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MR FRYLA  NSS+ SD+ EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDGGG +STRPPPPPASNKGLKKKILRSLPK+TFTAEFA QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVK+ GEDK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

A0A6J1IVW2 RING-H2 finger protein ATL804.8e-9290.32Show/hide
Query:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF
        MRPFRYLA  NSS+ SD+ EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHL GDGGG +STRPPPPPASNKGLKKKILRSLPK+TFTAEFA QF
Subjt:  MRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHV+CIDTWFRSHSSCPSCRQILVV+QCQKCGGFPASSSSN GTESRVK+ GEDK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.9e-3758.16Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA--------GQFSDCAICLAEFAVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR  T   GG S       P+ NKGLKKK L+SLP+ TFTA  +        G  ++CAICL +FA G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA--------GQFSDCAICLAEFAVGDEI

Query:  RVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG
        RVLP CGH FHV CID W  S SSCPSCR+IL   +C +CG
Subjt:  RVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG

Q8LC69 RING-H2 finger protein ATL81.9e-5358.62Show/hide
Query:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--AGQFS
        FR L   NS++ ++++ P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +      +  T PPP  A+NKGLKKK+LRSLPK T++ +   A +  
Subjt:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--AGQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKE
        +CAICL EFA GDE+RVLPQCGHGFHV+CIDTW  SHSSCPSCRQILVV +C KCGG P SSSS    ++R+K+
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKE

Q9FLC6 RING-H2 finger protein ATL735.7e-2645.52Show/hide
Query:  GDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPAS-NKGLKKKILRSLPKHTFTAEFAGQFSDCAICL
        GD+ S   + A     D+  VIILAALLCALIC LG+ +V RC     L      T +  P    A+  KG+KK+ L+ +P  +++ E   + ++C ICL
Subjt:  GDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPAS-NKGLKKKILRSLPKHTFTAEFAGQFSDCAICL

Query:  AEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQ
         +F  G+ +RVLP+C HGFHV CIDTW  SHSSCP+CRQ L+ +Q
Subjt:  AEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQ

Q9LM69 RING-H2 finger protein ATL804.5e-5557.81Show/hide
Query:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGD----GGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--A
        FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR L        G  + +  PP  A+NKGLKKK+L+SLPK TF+ E   +
Subjt:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGD----GGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--A

Query:  GQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVK---EGGEDKANRFLP
         +F++CAICLAEF+ GDE+RVLPQCGHGFHVACIDTW  SHSSCPSCRQILVV +C KCGG P SSSS   +E  ++   + GED  N FLP
Subjt:  GQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVK---EGGEDKANRFLP

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL451.1e-3753.02Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA----------------GQFSDCAICLA
        ++D V+IL+ALLCAL+CV GL AVARCAWLR LTG         PPP    NKGLKKK L++LPK T+TA  +                   ++CAIC+ 
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA----------------GQFSDCAICLA

Query:  EFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG
        EF+ G+EIR+LP C H FHVACID W  S SSCPSCR+ILV  +C +CG
Subjt:  EFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein3.2e-5657.81Show/hide
Query:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGD----GGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--A
        FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR L        G  + +  PP  A+NKGLKKK+L+SLPK TF+ E   +
Subjt:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGD----GGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--A

Query:  GQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVK---EGGEDKANRFLP
         +F++CAICLAEF+ GDE+RVLPQCGHGFHVACIDTW  SHSSCPSCRQILVV +C KCGG P SSSS   +E  ++   + GED  N FLP
Subjt:  GQFSDCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVK---EGGEDKANRFLP

AT1G76410.1 RING/U-box superfamily protein1.3e-5458.62Show/hide
Query:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--AGQFS
        FR L   NS++ ++++ P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +      +  T PPP  A+NKGLKKK+LRSLPK T++ +   A +  
Subjt:  FRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEF--AGQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKE
        +CAICL EFA GDE+RVLPQCGHGFHV+CIDTW  SHSSCPSCRQILVV +C KCGG P SSSS    ++R+K+
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKE

AT2G17450.1 RING-H2 finger A3A1.3e-3858.16Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA--------GQFSDCAICLAEFAVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR  T   GG S       P+ NKGLKKK L+SLP+ TFTA  +        G  ++CAICL +FA G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA--------GQFSDCAICLAEFAVGDEI

Query:  RVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG
        RVLP CGH FHV CID W  S SSCPSCR+IL   +C +CG
Subjt:  RVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG

AT4G35480.1 RING-H2 finger A3B7.9e-3953.02Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA----------------GQFSDCAICLA
        ++D V+IL+ALLCAL+CV GL AVARCAWLR LTG         PPP    NKGLKKK L++LPK T+TA  +                   ++CAIC+ 
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFA----------------GQFSDCAICLA

Query:  EFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG
        EF+ G+EIR+LP C H FHVACID W  S SSCPSCR+ILV  +C +CG
Subjt:  EFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCG

AT5G05280.1 RING/U-box superfamily protein4.1e-2745.52Show/hide
Query:  GDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPAS-NKGLKKKILRSLPKHTFTAEFAGQFSDCAICL
        GD+ S   + A     D+  VIILAALLCALIC LG+ +V RC     L      T +  P    A+  KG+KK+ L+ +P  +++ E   + ++C ICL
Subjt:  GDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPAS-NKGLKKKILRSLPKHTFTAEFAGQFSDCAICL

Query:  AEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQ
         +F  G+ +RVLP+C HGFHV CIDTW  SHSSCP+CRQ L+ +Q
Subjt:  AEFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCTCATGCGTCCCTTCAGGTACCTCGCCGGTGACAACTCCTCGGCGACTTCCGACTCGGCGGAGCCCGAGAGATACGACTCCGACTTCGTCATAATCCTCGCAGCCCT
ACTCTGCGCCTTAATCTGCGTTCTCGGTCTCGTTGCGGTGGCCCGCTGCGCCTGGCTCCGTCACCTCACCGGCGATGGCGGCGGCACCTCTTCCACTCGTCCTCCTCCGC
CTCCTGCCTCAAACAAAGGTCTCAAGAAGAAGATCCTCAGATCTCTTCCCAAGCACACCTTCACTGCTGAGTTTGCCGGTCAATTCTCAGATTGCGCGATCTGCCTCGCG
GAGTTCGCTGTCGGTGATGAAATCCGGGTGCTGCCGCAGTGCGGCCACGGCTTTCACGTGGCCTGCATCGATACCTGGTTCCGATCTCACTCCTCGTGCCCTTCGTGCCG
TCAGATTCTGGTGGTGAATCAGTGCCAGAAGTGCGGGGGTTTCCCGGCGAGCTCGAGTTCGAACGCTGGGACCGAATCCAGAGTAAAAGAAGGAGGAGAAGATAAGGCAA
ATAGGTTCTTACCT
mRNA sequenceShow/hide mRNA sequence
CTCCTCATGCGTCCCTTCAGGTACCTCGCCGGTGACAACTCCTCGGCGACTTCCGACTCGGCGGAGCCCGAGAGATACGACTCCGACTTCGTCATAATCCTCGCAGCCCT
ACTCTGCGCCTTAATCTGCGTTCTCGGTCTCGTTGCGGTGGCCCGCTGCGCCTGGCTCCGTCACCTCACCGGCGATGGCGGCGGCACCTCTTCCACTCGTCCTCCTCCGC
CTCCTGCCTCAAACAAAGGTCTCAAGAAGAAGATCCTCAGATCTCTTCCCAAGCACACCTTCACTGCTGAGTTTGCCGGTCAATTCTCAGATTGCGCGATCTGCCTCGCG
GAGTTCGCTGTCGGTGATGAAATCCGGGTGCTGCCGCAGTGCGGCCACGGCTTTCACGTGGCCTGCATCGATACCTGGTTCCGATCTCACTCCTCGTGCCCTTCGTGCCG
TCAGATTCTGGTGGTGAATCAGTGCCAGAAGTGCGGGGGTTTCCCGGCGAGCTCGAGTTCGAACGCTGGGACCGAATCCAGAGTAAAAGAAGGAGGAGAAGATAAGGCAA
ATAGGTTCTTACCT
Protein sequenceShow/hide protein sequence
LLMRPFRYLAGDNSSATSDSAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLTGDGGGTSSTRPPPPPASNKGLKKKILRSLPKHTFTAEFAGQFSDCAICLA
EFAVGDEIRVLPQCGHGFHVACIDTWFRSHSSCPSCRQILVVNQCQKCGGFPASSSSNAGTESRVKEGGEDKANRFLP