; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021774 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021774
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLocalized to the inner membrane of the chloroplast
Genome locationscaffold1:277012..279317
RNA-Seq ExpressionMS021774
SyntenyMS021774
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006486 - protein glycosylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0008250 - oligosaccharyltransferase complex (cellular component)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037964.1 hypothetical protein SDJN02_01597, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-6589.47Show/hide
Query:  LPGSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFI
        LPGSN+K ADKR GS SPT  L N   VGK KLSTFRRPLSVQAAYSDGGRS +AGIFIGGFVLGGLIVGTLGCVYAPQISKA+AG DRKDLMRKLPKFI
Subjt:  LPGSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFI

Query:  YDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        YDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  YDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_022135691.1 uncharacterized protein LOC111007585 [Momordica charantia]1.7e-73100Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_022941515.1 uncharacterized protein LOC111446794 [Cucurbita moschata]5.4e-6489.33Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSN+K ADKR GS SPT  L N   VGK KLSTFRRPLSVQAAYSDGGRS +AGIFIGGFVLGGLIVGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_023521457.1 uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]7.0e-6488.67Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSN+K ADKR GS SPT  L N   VGK KLSTFRRPLSVQAAYSDGGRS +AGIFIGGFVLGGL+VGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_038900139.1 uncharacterized protein LOC120087268 [Benincasa hispida]2.4e-6489.4Show/hide
Query:  PGSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIY
        PGSN+K A+K LGS SPTS L     VGK KLSTFRRPLSVQAAYSDGGRS NAGIFIGGFVLGGLIVGTLGCVYAPQISKA+AGADRKDLMRKLPKFIY
Subjt:  PGSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIY

Query:  DEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        DEEKALEKTRKVLAQKIEQLNSAIDEVS QLRTED PNGVAVNSDEVEPAI
Subjt:  DEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

TrEMBL top hitse value%identityAlignment
A0A1S3BV81 uncharacterized protein LOC1034938441.4e-6288Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSN+K  DKRLGS SPTS + +   VGK KLSTFRRPLSVQAAYSDGGRS NAGIFIGGFVLGG+IVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVS QLR ED PNGVAVNSDEVE AI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1C1G6 uncharacterized protein LOC1110075858.1e-74100Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1FC82 uncharacterized protein LOC1114427781.4e-6286.67Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSN+K ADK LGS SPTS L N   VGK KLST RRPLSVQAAYSDGGRS NAGIF+GGFVLGGLIVGTLGCVYAPQISKA+AG DRK+LMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+D PNGVAVNSDE+EPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1FTW3 uncharacterized protein LOC1114467942.6e-6489.33Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSN+K ADKR GS SPT  L N   VGK KLSTFRRPLSVQAAYSDGGRS +AGIFIGGFVLGGLIVGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1IT36 uncharacterized protein LOC1114803665.8e-6488.67Show/hide
Query:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
        GSN+K ADKR GS SPT  L N   VGK KLSTFRRPLSVQAAYSDGGRS +AGIFIGGFVLGGLIVGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Subjt:  GSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD

Query:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        EEKA+EKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  EEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.5.0e-4476.11Show/hide
Query:  RRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTED
        +R L++Q+AY D   SG+ G+F+GGF+LGGLIVG LGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VS+QL++ED
Subjt:  RRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTED

Query:  SPNGVAVNSDEVE
        +PNG A+++DE+E
Subjt:  SPNGVAVNSDEVE

AT3G02900.1 unknown protein2.3e-1237.61Show/hide
Query:  LSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPN
        LSV A Y  G + G +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VS++L+   S +
Subjt:  LSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPN

Query:  GVAVNSDEV
            +S  V
Subjt:  GVAVNSDEV

AT3G02900.2 unknown protein2.3e-1237.61Show/hide
Query:  LSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPN
        LSV A Y  G + G +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VS++L+   S +
Subjt:  LSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPN

Query:  GVAVNSDEV
            +S  V
Subjt:  GVAVNSDEV

AT5G16660.1 unknown protein1.7e-1544.26Show/hide
Query:  KLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQ
        K S   R  SV A Y DG RSG++G FI GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +KI QLNSAID VS++
Subjt:  KLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQ

Query:  LRTED---SPNGVAVNSD-EVE
        LR  +   S   V V +D EVE
Subjt:  LRTED---SPNGVAVNSD-EVE

AT5G16660.2 unknown protein2.7e-1343.44Show/hide
Query:  KLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQ
        K S   R  SV A   DG RSG++G FI GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +KI QLNSAID VS++
Subjt:  KLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQ

Query:  LRTED---SPNGVAVNSD-EVE
        LR  +   S   V V +D EVE
Subjt:  LRTED---SPNGVAVNSD-EVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCCAGGATCGAATATGAAAGCTGCTGATAAACGTCTTGGGAGTGCATCTCCGACCAGCTTCTTGCACAATTCTGATCGGGTGGGAAAGGTGAAGCTTTCTACATTTAG
GCGACCACTCTCAGTTCAAGCTGCATATAGTGATGGCGGACGGTCAGGCAATGCAGGCATTTTTATTGGAGGTTTTGTTTTGGGCGGGCTCATAGTTGGCACACTTGGCT
GTGTATATGCCCCTCAGATCAGCAAAGCAATTGCTGGAGCAGACCGAAAGGATTTGATGAGGAAACTTCCCAAGTTCATTTATGATGAAGAAAAAGCTTTAGAGAAAACG
AGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTACTCAGCTCCGCACAGAGGATTCCCCAAATGGAGTGGCCGTGAACTCTGACGA
AGTCGAACCTGCCATT
mRNA sequenceShow/hide mRNA sequence
CTGCCAGGATCGAATATGAAAGCTGCTGATAAACGTCTTGGGAGTGCATCTCCGACCAGCTTCTTGCACAATTCTGATCGGGTGGGAAAGGTGAAGCTTTCTACATTTAG
GCGACCACTCTCAGTTCAAGCTGCATATAGTGATGGCGGACGGTCAGGCAATGCAGGCATTTTTATTGGAGGTTTTGTTTTGGGCGGGCTCATAGTTGGCACACTTGGCT
GTGTATATGCCCCTCAGATCAGCAAAGCAATTGCTGGAGCAGACCGAAAGGATTTGATGAGGAAACTTCCCAAGTTCATTTATGATGAAGAAAAAGCTTTAGAGAAAACG
AGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTACTCAGCTCCGCACAGAGGATTCCCCAAATGGAGTGGCCGTGAACTCTGACGA
AGTCGAACCTGCCATT
Protein sequenceShow/hide protein sequence
LPGSNMKAADKRLGSASPTSFLHNSDRVGKVKLSTFRRPLSVQAAYSDGGRSGNAGIFIGGFVLGGLIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKT
RKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI