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MS021801 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021801
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription activator-like protein
Genome locationscaffold1:432588..432884
RNA-Seq ExpressionMS021801
SyntenyMS021801
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591229.1 hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3988.89Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYG EEGQQQ L+KKPASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
XP_008452943.1 PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo]7.9e-3279.21Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYF
        ME  Q+IEMERE+QRRE++KK+EQ+PP  ISPMQPLTESAYGGGMYG EEG Q+ L  KK PAS TQSADGPVEA MK KH PPPSSGDRDIDITGQSYF
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYF

Query:  Q
        Q
Subjt:  Q
XP_022132786.1 uncharacterized protein LOC111005558 [Momordica charantia]8.1e-45100Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
XP_022936823.1 uncharacterized protein LOC111443294 [Cucurbita moschata]6.0e-4089.9Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYGAEEGQQQ L+KKPASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
XP_038899828.1 uncharacterized protein LOC120087055 [Benincasa hispida]3.1e-3683.84Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQK+EMERE+QRREE+KKMEQQPP  ISPM+PLTESAYGGGMYG EEG+++ L+KKPAS+TQSADGPVE  MKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
TrEMBL top hitse value%identityAlignment
A0A0A0L393 Uncharacterized protein5.7e-2875.49Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEE-GQQQLL--KKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSY
        ME  QKIEMERE+QRREE+KK+EQ+PP  IS MQPLTE AYGGGMYG ++ G Q  L  KK PAS TQSADGPV A MK KH PPPSSGDRDIDITGQSY
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEE-GQQQLL--KKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
A0A1S3BV26 uncharacterized protein LOC1034938023.8e-3279.21Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYF
        ME  Q+IEMERE+QRRE++KK+EQ+PP  ISPMQPLTESAYGGGMYG EEG Q+ L  KK PAS TQSADGPVEA MK KH PPPSSGDRDIDITGQSYF
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYF

Query:  Q
        Q
Subjt:  Q
A0A6J1BT98 uncharacterized protein LOC1110055583.9e-45100Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
A0A6J1FEB2 uncharacterized protein LOC1114432942.9e-4089.9Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYGAEEGQQQ L+KKPASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
A0A6J1IJZ9 uncharacterized protein LOC1114769712.9e-4089.9Show/hide
Query:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
        ME NQK+EMERE+QRREETKK+EQ+PP  ISPMQPLTESAYGGGMYGAEEGQQQ L+KKPASDTQSADGPVE+GMKPKHAPPPSSGDRDIDITGQSYFQ
Subjt:  MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42290.1 transcription activator-related2.7e-1446.9Show/hide
Query:  QKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAE-----------------EGQQQLLKKKPASDTQSADGPVEA-GMKPKHAPPPSSG
        +K   +  E+ R++ +  + QPP  IS MQP+T  AYGGG+YG +                 E QQQ   + PASDTQSADGP E   + PKH  P SSG
Subjt:  QKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAE-----------------EGQQQLLKKKPASDTQSADGPVEA-GMKPKHAPPPSSG

Query:  DRDIDITGQSYFQ
        DRD+DITGQSY Q
Subjt:  DRDIDITGQSYFQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGAATCAGAAGATCGAGATGGAGCGGGAGGAGCAGAGGCGAGAAGAAACGAAGAAGATGGAGCAACAACCGCCGCAAAATATTTCTCCGATGCAACCGTTGAC
GGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCCAACAGCAACTCCTGAAGAAGAAACCGGCGAGCGACACGCAGAGCGCCGATGGACCGGTTGAAGCCG
GAATGAAGCCGAAGCATGCGCCTCCGCCGTCGTCCGGCGACAGAGATATCGACATCACCGGCCAGTCGTATTTTCAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGAATCAGAAGATCGAGATGGAGCGGGAGGAGCAGAGGCGAGAAGAAACGAAGAAGATGGAGCAACAACCGCCGCAAAATATTTCTCCGATGCAACCGTTGAC
GGAAAGTGCTTACGGCGGAGGAATGTACGGCGCCGAGGAAGGCCAACAGCAACTCCTGAAGAAGAAACCGGCGAGCGACACGCAGAGCGCCGATGGACCGGTTGAAGCCG
GAATGAAGCCGAAGCATGCGCCTCCGCCGTCGTCCGGCGACAGAGATATCGACATCACCGGCCAGTCGTATTTTCAG
Protein sequenceShow/hide protein sequence
MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLLKKKPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ