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MS021805 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021805
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Genome locationscaffold1:453016..453531
RNA-Seq ExpressionMS021805
SyntenyMS021805
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044980 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, plant/fungi


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024119.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2195.92Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTT+KG+TIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
XP_022132798.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Momordica charantia]6.2e-22100Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
XP_022936519.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita moschata]4.0e-2195.92Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTT+KG+TIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
XP_030447060.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Syzygium oleosum]2.4e-2195.92Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHG GTTYKGIT+HQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
XP_038897102.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Benincasa hispida]2.4e-2195.92Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTTYKG+T+HQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
TrEMBL top hitse value%identityAlignment
A0A1S3BV22 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 22.6e-2193.88Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTTYKG+TIH PKRWHTVTGKGLCA+MWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
A0A5A7VAL3 NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 22.6e-2193.88Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTTYKG+TIH PKRWHTVTGKGLCA+MWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
A0A6J1BU57 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 23.0e-22100Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
A0A6J1F8I8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 22.0e-2195.92Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTT+KG+TIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
A0A6J1ILY9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 22.0e-2195.92Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHGAGTT+KG+TIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
SwissProt top hitse value%identityAlignment
Q8LDK3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 21.1e-2183.67Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHG G TYKG+T+H PK WHTVTGKGLCAVMWFW+LYRAKQDGPVV+
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Arabidopsis top hitse value%identityAlignment
AT1G76200.1 unknown protein7.9e-2383.67Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        GGGHG G TYKG+T+H PK WHTVTGKGLCAVMWFW+LYRAKQDGPVV+
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGGTGGGCATGGAGCGGGTACAACTTACAAGGGCATCACCATACACCAGCCGAAGCGCTGGCACACCGTCACCGGCAAGGGCTTGTGCGCCGTCATGTGGTTTTGGGT
GCTATACAGGGCGAAGCAAGATGGACCTGTAGTACTG
mRNA sequenceShow/hide mRNA sequence
GGAGGTGGGCATGGAGCGGGTACAACTTACAAGGGCATCACCATACACCAGCCGAAGCGCTGGCACACCGTCACCGGCAAGGGCTTGTGCGCCGTCATGTGGTTTTGGGT
GCTATACAGGGCGAAGCAAGATGGACCTGTAGTACTG
Protein sequenceShow/hide protein sequence
GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL