CuGenDBv2

Gene ID	MS021809
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	large proline-rich protein BAG6 isoform X2
Genome location	scaffold1:475993..476602
RNA-Seq Expression	MS021809
Synteny	MS021809
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0071818 - BAT3 complex (cellular component) GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function) GO:0051787 - misfolded protein binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008452934.1 PREDICTED: large proline-rich protein bag6-B isoform X1 [Cucumis melo]

4.9e-31

77.08

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDL RVELPTNP  LPT ESL +VLRHAQ+LLSDYA +SL RI ERLEQ+  S+DP VR QIQEE VQVGL M+QFG+LLLELGRTILT RMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

XP_022140788.1 uncharacterized protein LOC111011363 isoform X1 [Momordica charantia]

4.6e-45

100

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

XP_022140796.1 uncharacterized protein LOC111011363 isoform X2 [Momordica charantia]

4.6e-45

100

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

XP_038898029.1 ubiquitin-like domain-containing protein CIP73 isoform X1 [Benincasa hispida]

2.9e-31

77.08

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDL RVELPTNP  LPT ESL +VLRHAQ+LLSDYA +SL RI ERLEQ+  S+DP VR QIQEE VQ+GL M+QFGALLLELGRTILT RMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

XP_038898030.1 ubiquitin-like domain-containing protein CIP73 isoform X2 [Benincasa hispida]

2.9e-31

77.08

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDL RVELPTNP  LPT ESL +VLRHAQ+LLSDYA +SL RI ERLEQ+  S+DP VR QIQEE VQ+GL M+QFGALLLELGRTILT RMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BVT8 large proline-rich protein bag6-B isoform X1

2.4e-31

77.08

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDL RVELPTNP  LPT ESL +VLRHAQ+LLSDYA +SL RI ERLEQ+  S+DP VR QIQEE VQVGL M+QFG+LLLELGRTILT RMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

A0A5A7VCC0 Large proline-rich protein bag6-B isoform X1

2.4e-31

77.08

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDL RVELPTNP  LPT ESL +VLRHAQ+LLSDYA +SL RI ERLEQ+  S+DP VR QIQEE VQVGL M+QFG+LLLELGRTILT RMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

A0A5D3D8S3 Large proline-rich protein bag6-B isoform X1

2.4e-31

77.08

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDL RVELPTNP  LPT ESL +VLRHAQ+LLSDYA +SL RI ERLEQ+  S+DP VR QIQEE VQVGL M+QFG+LLLELGRTILT RMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

A0A6J1CH42 uncharacterized protein LOC111011363 isoform X2

2.2e-45

100

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

A0A6J1CIT7 uncharacterized protein LOC111011363 isoform X1

2.2e-45

100

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

SwissProt top hits

e value

%identity

Alignment

D5LXJ0 Ubiquitin-like domain-containing protein CIP73

8.0e-08

34.83

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Query:  LPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        L + P  L +P SL  VL   ++++ + A   L ++  +LE     +DP  R+  Q   ++ G+     GA LLELGRT +T R+GQ+P
Subjt:  LPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

Arabidopsis top hits

e value

%identity

Alignment

AT5G25270.1 Ubiquitin-like superfamily protein

7.7e-06

32.18

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Query:  TNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        T    +P P  L  VL+  +QLL       L  +  +L      +DP  R   Q  ++Q G  +   G  LLELGR  +  R+GQ+P
Subjt:  TNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

AT5G42220.1 Ubiquitin-like superfamily protein

9.6e-25

61.46

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Query:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP
        G  PR ELP N     TPE+L +VLR+AQ LLS    +SL  I  RLEQ+G SSDP +R+QIQ E VQVGL+M+  GALLLELGRTILT RM  SP
Subjt:  GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

Sequences

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CDS sequence

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GGAGATCTGCCAAGGGTGGAACTGCCTACCAATCCCCATGATTTGCCAACTCCTGAATCTTTGGGGCTTGTCTTGCGACATGCTCAACAGCTTCTAAGTGATTATGCCAC
CACTTCCTTACCGAGAATTGTTGAGCGATTGGAGCAAGAGGGGTGTTCTAGTGATCCAAATGTGAGGGCTCAAATCCAGGAAGAGTTGGTTCAAGTAGGACTTAGTATGC
GACAATTTGGAGCCCTTCTTCTCGAACTTGGTCGTACGATCTTGACCTTTCGCATGGGACAATCACCC

mRNA sequence

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Protein sequence

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GDLPRVELPTNPHDLPTPESLGLVLRHAQQLLSDYATTSLPRIVERLEQEGCSSDPNVRAQIQEELVQVGLSMRQFGALLLELGRTILTFRMGQSP

MS021809 (gene) of Bitter gourd (TR) v1 genome