; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021819 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021819
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhigh mobility group B protein 9
Genome locationscaffold1:547448..549302
RNA-Seq ExpressionMS021819
SyntenyMS021819
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR009071 - High mobility group box domain
IPR036431 - ARID DNA-binding domain superfamily
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]9.4e-17592.28Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYPP+LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF FGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMR  T++   NYSKHG+
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]6.5e-17693.21Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMR  TD+   NYSKHG+
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

XP_022140929.1 high mobility group B protein 9 [Momordica charantia]2.8e-18799.69Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARSKSWNAGQDKHYP ALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMRQATDIHEPNYSKHGE
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

XP_023535855.1 high mobility group B protein 9-like [Cucurbita pepo subsp. pepo]1.1e-17091.38Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+KS N G DK YPP LATHDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVY+F RQGPIC PQAPFSFGSP+SENELALVEYTPKTTSFSPGPPAEV GTIDGKFDCGYLV+VKLGSEVLRGVLYHPE+P+P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRPQ  NAIVPYTG R RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQAT-DIHEPNYSKHGE
        LKEYKEKMR A+ D+H  NYSK GE
Subjt:  LKEYKEKMRQAT-DIHEPNYSKHGE

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]1.1e-17593.83Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPA +KSWN G DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF  GSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSE+LRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRPQS NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMRQA+D+ +  YSKHGE
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

TrEMBL top hitse value%identityAlignment
A0A0A0L181 Uncharacterized protein4.5e-17592.28Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYPP+LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPF FGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMR  T++   NYSKHG+
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

A0A1S3BUE9 high mobility group B protein 93.1e-17693.21Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMR  TD+   NYSKHG+
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

A0A5A7VAK3 High mobility group B protein 93.1e-17693.21Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMR  TD+   NYSKHG+
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

A0A6J1CH52 high mobility group B protein 91.4e-18799.69Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARSKSWNAGQDKHYP ALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMRQATDIHEPNYSKHGE
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

E5GCD0 High mobility group family3.1e-17693.21Show/hide
Query:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP
        SFVLRKHYLSLLYHYEQVYLF RQGPICVPQAPFSFGSP+SENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSP

Query:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE
        S+LRP S NAIVPYTGGR RHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERY+RE
Subjt:  SNLRPQSINAIVPYTGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRE

Query:  LKEYKEKMRQATDIHEPNYSKHGE
        LKEYKEKMR  TD+   NYSKHG+
Subjt:  LKEYKEKMRQATDIHEPNYSKHGE

SwissProt top hitse value%identityAlignment
Q68CP9 AT-rich interactive domain-containing protein 21.1e-1340.2Show/hide
Query:  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQ
        + F D LR+FH    + F  IP +GGKELDLH LY+ VT  GG  KV  + +W E+   F F  + ++A+F L+++YL  L  YE+V+ F        P 
Subjt:  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQGPICVPQ

Query:  AP
         P
Subjt:  AP

Q9LG02 Putative high mobility group B protein 115.2e-4336.36Show/hide
Query:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQ
        + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F   
Subjt:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQ

Query:  GPICVPQAPFSFGSPSSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHS
              QAP S      +    L+E +      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH    SP   R                  
Subjt:  GPICVPQAPFSFGSPSSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHS

Query:  GRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKM
        G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M
Subjt:  GRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKM

Q9LTT3 High mobility group B protein 101.6e-5544.41Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS

Query:  RQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLRPQSINAIVPYTGGRLRH
        +  P+   Q+     +  +   LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ PS S    ++ +AIV       + 
Subjt:  RQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLRPQSINAIVPYTGGRLRH

Query:  SGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYK
        S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  SGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYK

Q9MAT6 High mobility group B protein 151.2e-6844.62Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS

Query:  RQGPICVPQAPFSFGSPSS-----------ENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLR
          G I     P S  SPS+             EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q + S   
Subjt:  RQGPICVPQAPFSFGSPSS-----------ENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLR

Query:  PQSINAIVPYT-----------GGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKD
        PQ  + ++P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+ +YQ   ++D
Subjt:  PQSINAIVPYT-----------GGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKD

Query:  KERYKRELKEYKEKMR
        KERY+ E+++Y+EK +
Subjt:  KERYKRELKEYKEKMR

Q9SGS2 High mobility group B protein 93.4e-11168.52Show/hide
Query:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSI
        EQV+LF+ +GP+  P A F   +PS+  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS+  P ++
Subjt:  EQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSI

Query:  --NAIVPY--TGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEY
          NA+VPY  TG R R  G+R RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EER VYQ+IGLKDKERY+REL EY
Subjt:  --NAIVPY--TGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEY

Query:  KEKMR
        +E +R
Subjt:  KEKMR

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain8.7e-7044.62Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS

Query:  RQGPICVPQAPFSFGSPSS-----------ENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLR
          G I     P S  SPS+             EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q + S   
Subjt:  RQGPICVPQAPFSFGSPSS-----------ENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLR

Query:  PQSINAIVPYT-----------GGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKD
        PQ  + ++P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+ +YQ   ++D
Subjt:  PQSINAIVPYT-----------GGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKD

Query:  KERYKRELKEYKEKMR
        KERY+ E+++Y+EK +
Subjt:  KERYKRELKEYKEKMR

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.7e-4436.36Show/hide
Query:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQ
        + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F   
Subjt:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFSRQ

Query:  GPICVPQAPFSFGSPSSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHS
              QAP S      +    L+E +      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH    SP   R                  
Subjt:  GPICVPQAPFSFGSPSSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLRHS

Query:  GRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKM
        G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+  M
Subjt:  GRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKM

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain2.4e-11268.52Show/hide
Query:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSI
        EQV+LF+ +GP+  P A F   +PS+  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS+  P ++
Subjt:  EQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSI

Query:  --NAIVPY--TGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEY
          NA+VPY  TG R R  G+R RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EER VYQ+IGLKDKERY+REL EY
Subjt:  --NAIVPY--TGGRLRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEY

Query:  KEKMR
        +E +R
Subjt:  KEKMR

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain1.1e-5644.41Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFS

Query:  RQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLRPQSINAIVPYTGGRLRH
        +  P+   Q+     +  +   LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ PS S    ++ +AIV       + 
Subjt:  RQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPSPSNLRPQSINAIVPYTGGRLRH

Query:  SGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYK
        S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  SGRRHRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYK

AT3G28730.1 high mobility group2.6e-0530Show/hide
Query:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKMRQATD
        + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W  +S +++  Y+     DK+RYK E+ +YK       D
Subjt:  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKMRQATD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCGCCGGCGAGGAGCAAGAGCTGGAACGCCGGCCAAGACAAGCATTATCCGCCGGCGCTGGCCACTCACGACGAAGTTATCTCCGACCCCATTGTTTTTTGGGA
CACTTTGAGACGCTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGATCTGCATGTTCTATATTCAGAGGTCACCAGAAGAGGCG
GCCATGAAAAGGTTGTCGCAGAGAAGAAATGGAGGGAAGTGGGAAGTGTTTTCAAGTTCTCTCCGACGACGACGAGTGCCTCATTTGTGTTGAGAAAGCATTATCTAAGT
CTTCTTTACCATTACGAGCAAGTTTACTTGTTTAGCCGGCAGGGCCCCATCTGTGTTCCTCAAGCGCCATTTTCTTTTGGTAGCCCTTCCAGTGAAAACGAATTGGCTCT
GGTGGAATATACCCCCAAAACCACGTCGTTTTCCCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGG
GATCTGAAGTTCTGAGAGGAGTACTTTACCATCCGGAGCAGCCCTCCCCATCCAATCTACGACCCCAATCAATCAACGCCATTGTACCATACACCGGTGGCAGGCTTCGA
CACTCCGGTCGACGGCATCGGAGGAGCCGGAGAAAGGGAGACCCGAACCACCCGAAACCGAACCGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTGAA
ATCTCTGTACCCAAATAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAATAACCTCAGCCCTGAAGAGAGGACGGTTTATCAGAACATTGGGCTGAAAGACA
AGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGATATTCATGAACCTAACTATTCAAAACATGGAGAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACCGCCGGCGAGGAGCAAGAGCTGGAACGCCGGCCAAGACAAGCATTATCCGCCGGCGCTGGCCACTCACGACGAAGTTATCTCCGACCCCATTGTTTTTTGGGA
CACTTTGAGACGCTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGATCTGCATGTTCTATATTCAGAGGTCACCAGAAGAGGCG
GCCATGAAAAGGTTGTCGCAGAGAAGAAATGGAGGGAAGTGGGAAGTGTTTTCAAGTTCTCTCCGACGACGACGAGTGCCTCATTTGTGTTGAGAAAGCATTATCTAAGT
CTTCTTTACCATTACGAGCAAGTTTACTTGTTTAGCCGGCAGGGCCCCATCTGTGTTCCTCAAGCGCCATTTTCTTTTGGTAGCCCTTCCAGTGAAAACGAATTGGCTCT
GGTGGAATATACCCCCAAAACCACGTCGTTTTCCCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTGGTGACTGTGAAATTGG
GATCTGAAGTTCTGAGAGGAGTACTTTACCATCCGGAGCAGCCCTCCCCATCCAATCTACGACCCCAATCAATCAACGCCATTGTACCATACACCGGTGGCAGGCTTCGA
CACTCCGGTCGACGGCATCGGAGGAGCCGGAGAAAGGGAGACCCGAACCACCCGAAACCGAACCGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTGAA
ATCTCTGTACCCAAATAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAATAACCTCAGCCCTGAAGAGAGGACGGTTTATCAGAACATTGGGCTGAAAGACA
AGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAAATGAGGCAGGCAACTGATATTCATGAACCTAACTATTCAAAACATGGAGAG
Protein sequenceShow/hide protein sequence
MSPPARSKSWNAGQDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLS
LLYHYEQVYLFSRQGPICVPQAPFSFGSPSSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPSPSNLRPQSINAIVPYTGGRLR
HSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERTVYQNIGLKDKERYKRELKEYKEKMRQATDIHEPNYSKHGE