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MS021824 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021824
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLYR motif-containing protein 2
Genome locationscaffold1:605586..606047
RNA-Seq ExpressionMS021824
SyntenyMS021824
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591251.1 LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]8.0e-3086.59Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MV++LDL EFILRARVLKL+RQALRT RKAPVHAREELRHTIRQEMENNRSC+D+QKVR+L+SEG+E LKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

XP_022140612.1 uncharacterized protein LOC111011218 [Momordica charantia]8.2e-35100Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]1.0e-2986.59Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MV++LDL EFILRARVLKL+RQALRT RKAPVHAREELRHTIRQEMENNR C+D+QKVR+L+SEGIE LKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]3.6e-3087.8Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MV++LDL EFILRARVLKL+RQALRT RKAPVHAREELRHTIRQEMENNRSC+D+QKVR+L+SEGIE LKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

XP_038877724.1 uncharacterized protein LOC120069952 [Benincasa hispida]1.0e-2984.15Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        M +SLDL +FILRARVLKL+RQALRTARKAPVHAREEL+HT+RQEMENNR+CN++QK+RYL+SEGIE LKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112184.0e-35100Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

A0A6J1F8N3 uncharacterized protein LOC1114433215.0e-3086.59Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MV++LDL EFILRARVLKL+RQALRT RKAPVHAREELRHTIRQEMENNR C+D+QKVR+L+SEGIE LKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

A0A6J1FM54 uncharacterized protein LOC1114464663.6e-2883.95Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGH
        MV+SLDL EFILRARVLKL+R ALRTA+KAPVHAREELRHTIRQEMENNR CN++QKVR+L+SEGIE LKRL+EMLDMQG+
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGH

A0A6J1IFA5 uncharacterized protein LOC1114764181.5e-2985.37Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS
        MV++LDL EFILRARVLKL+RQALRT RKAPVHAREELRHTIRQEMENNRSC+D+QK+R+L+SEG E LKRLDEMLDMQGHS
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS

A0A6J1IY12 uncharacterized protein LOC1114809623.4e-2681.48Show/hide
Query:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGH
        MV+SLDL EFILRARVLKL+RQALR A+KAPVHAREELR  IRQEMENNR CN++QKVR+L+SEGIE LKRL+EMLDMQG+
Subjt:  MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein1.8e-2773.75Show/hide
Query:  VVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGH
        +V LDL  FILRARVLKL+RQAL+ A +APVH R EL+ T+RQEME NR CNDKQK+RYLISEG+E +K LDEMLDMQGH
Subjt:  VVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTCTCCCTTGATTTACATGAATTTATTCTACGGGCAAGGGTGTTGAAACTGTTCAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTAGAGAGGA
ACTGAGGCATACGATCAGGCAAGAAATGGAAAACAACCGCAGCTGTAATGACAAACAGAAAGTTAGGTATCTGATCAGTGAAGGAATAGAGAGTTTGAAGCGTTTAGACG
AGATGTTGGATATGCAAGGTCATTCA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTCTCCCTTGATTTACATGAATTTATTCTACGGGCAAGGGTGTTGAAACTGTTCAGGCAGGCTTTAAGAACTGCTCGCAAAGCTCCTGTTCACGCTAGAGAGGA
ACTGAGGCATACGATCAGGCAAGAAATGGAAAACAACCGCAGCTGTAATGACAAACAGAAAGTTAGGTATCTGATCAGTGAAGGAATAGAGAGTTTGAAGCGTTTAGACG
AGATGTTGGATATGCAAGGTCATTCA
Protein sequenceShow/hide protein sequence
MVVSLDLHEFILRARVLKLFRQALRTARKAPVHAREELRHTIRQEMENNRSCNDKQKVRYLISEGIESLKRLDEMLDMQGHS