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MS021828 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021828
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Genome locationscaffold1:626661..626810
RNA-Seq ExpressionMS021828
SyntenyMS021828
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AJE71881.1 NADH dehydrogenase subunit 2 [Strophostyles leiosperma]1.1e-1087.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
QRZ59571.1 NADH-plastoquinone oxidoreductase subunit 2 [Vigna subterranea]1.1e-1087.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
YP_001122857.1 NADH-plastoquinone oxidoreductase subunit 2 [Phaseolus vulgaris]1.1e-1087.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
YP_003434384.1 NADH-plastoquinone oxidoreductase subunit 2 [Vigna radiata]1.1e-1087.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
YP_010046506.1 NADH-plastoquinone oxidoreductase subunit 2 [Lablab purpureus]1.1e-1087.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
TrEMBL top hitse value%identityAlignment
A0A0F7RJU6 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic5.5e-1187.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
A0A0F7RPH5 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic5.5e-1187.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
A0A7T0GE43 NADH-plastoquinone oxidoreductase subunit 25.5e-1187.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
I2E2T0 NADH-quinone oxidoreductase subunit N5.5e-1187.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
N0DL12 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic5.5e-1187.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
SwissProt top hitse value%identityAlignment
P0CC32 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.6e-1385.37Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LT TLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
P0CC98 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic4.3e-1387.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        VLT TLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
P0CC99 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic4.3e-1387.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        VLT TLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
P0CD28 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic1.5e-1387.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
P0CD29 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic1.5e-1387.8Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LTTTLG MFLC A DLITIFVALECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
Arabidopsis top hitse value%identityAlignment
ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.6e-1382.93Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LT TLG MFLC A DLITIFVA ECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.6e-1382.93Show/hide
Query:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN
        +LT TLG MFLC A DLITIFVA ECFSLCSYLLSGYTKK+
Subjt:  VLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGTCTCAAACAAGGAAAAGGATCCGTATTAACTACTACTCTAGGAAGAATGTTTTTATGCGATGCTAGGGATTTAATAACTATATTTGTAGCTCTAGAATGTTTCAG
TTTATGCTCCTACCTATTATCTGGATATACCAAGAAAAAT
mRNA sequenceShow/hide mRNA sequence
GAGAGTCTCAAACAAGGAAAAGGATCCGTATTAACTACTACTCTAGGAAGAATGTTTTTATGCGATGCTAGGGATTTAATAACTATATTTGTAGCTCTAGAATGTTTCAG
TTTATGCTCCTACCTATTATCTGGATATACCAAGAAAAAT
Protein sequenceShow/hide protein sequence
ESLKQGKGSVLTTTLGRMFLCDARDLITIFVALECFSLCSYLLSGYTKKN