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MS021848 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021848
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGibberellin-regulated family protein
Genome locationscaffold1:767970..768158
RNA-Seq ExpressionMS021848
SyntenyMS021848
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012836758.1 PREDICTED: snakin-2-like [Erythranthe guttata]2.5e-2377.78Show/hide
Query:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        VC+DC+GACA RCKLS RPNLCKRACGTCCA+C+CVPPGT G Y+ACPCYA +TTR  +PKCP
Subjt:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

XP_022139249.1 gibberellin-regulated protein 11-like [Momordica charantia]2.0e-2896.72Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]1.5e-2383.61Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

XP_038899682.1 gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida]1.0e-2488.52Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

XP_038899683.1 gibberellin-regulated protein 11-like isoform X2 [Benincasa hispida]1.0e-2488.52Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LDK8 Uncharacterized protein3.5e-2383.61Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RCKLSSRPNLC RACGTCCARCSCVPPGTSG Y+ACPCYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

A0A2C9TZR1 Uncharacterized protein3.5e-2381.97Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RC+LSSRP+LCKRACGTCCARC+CVPPGTSG YDACPCYA++TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

A0A6J1CCE1 gibberellin-regulated protein 11-like9.5e-2996.72Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like7.1e-2483.61Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like3.5e-2381.97Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.1e-2172.13Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG YD CPCY  +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

P46687 Gibberellin-regulated protein 31.3e-1968.25Show/hide
Query:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        V +DC G C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA ITTRGGR KCP
Subjt:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

P46688 Gibberellin-regulated protein 21.2e-1765.08Show/hide
Query:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        V +DC G C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA ITT GGR KCP
Subjt:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

P46689 Gibberellin-regulated protein 12.7e-2068.85Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC  AC  RC+LS RP LC RACGTCC RC+CVPPGT G YD C CYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

Q93X17 Snakin-24.9e-2272.13Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC GACA RC+LSSRP LC RACGTCCARC+CVPPGTSG  + CPCYA +TT G + KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 11.9e-2168.85Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC  AC  RC+LS RP LC RACGTCC RC+CVPPGT G YD C CYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

AT1G75750.2 GAST1 protein homolog 11.9e-2168.85Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC  AC  RC+LS RP LC RACGTCC RC+CVPPGT G YD C CYA +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

AT2G18420.1 Gibberellin-regulated family protein7.7e-2372.13Show/hide
Query:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        +DC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG YD CPCY  +TT GGR KCP
Subjt:  LDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

AT4G09600.1 GAST1 protein homolog 39.4e-2168.25Show/hide
Query:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        V +DC G C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA ITTRGGR KCP
Subjt:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP

AT4G09610.1 GAST1 protein homolog 28.8e-1965.08Show/hide
Query:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP
        V +DC G C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA ITT GGR KCP
Subjt:  VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTGTTTAGATTGCCGGGGAGCGTGTGCGATGAGGTGCAAGTTATCGTCGAGGCCGAACCTGTGCAAGAGGGCATGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCC
GCCGGGAACTTCCGGCGGCTATGACGCCTGCCCTTGCTACGCCCACATCACCACTCGCGGCGGCCGCCCAAAGTGTCCC
mRNA sequenceShow/hide mRNA sequence
GTGTGTTTAGATTGCCGGGGAGCGTGTGCGATGAGGTGCAAGTTATCGTCGAGGCCGAACCTGTGCAAGAGGGCATGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCC
GCCGGGAACTTCCGGCGGCTATGACGCCTGCCCTTGCTACGCCCACATCACCACTCGCGGCGGCCGCCCAAAGTGTCCC
Protein sequenceShow/hide protein sequence
VCLDCRGACAMRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP