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MS021849 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021849
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGibberellin-regulated family protein
Genome locationscaffold1:769532..769777
RNA-Seq ExpressionMS021849
SyntenyMS021849
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591269.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2895Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG +CDARCQLSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

XP_008466485.1 PREDICTED: gibberellin-regulated protein 1-like [Cucumis melo]5.7e-2895Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG ACDARC+LSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

XP_022142565.1 gibberellin-regulated protein 1-like [Momordica charantia]1.4e-29100Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

XP_022937106.1 gibberellin-regulated protein 1-like [Cucurbita moschata]2.0e-2896.67Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG ACDARCQLSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

XP_023535343.1 gibberellin-regulated protein 11-like [Cucurbita pepo subsp. pepo]2.0e-2896.67Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG ACDARCQLSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

TrEMBL top hitse value%identityAlignment
A0A1S3CRE3 gibberellin-regulated protein 1-like2.8e-2895Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG ACDARC+LSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

A0A5A7V5C1 Gibberellin-regulated protein 1-like2.8e-2895Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG ACDARC+LSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

A0A6J1CLA3 gibberellin-regulated protein 1-like6.6e-30100Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

A0A6J1F9F4 gibberellin-regulated protein 1-like9.5e-2996.67Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG ACDARCQLSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

A0A6J1IHC1 snakin-2-like2.8e-2895Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG  CDARCQLSSRQK+CKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 118.3e-2271.67Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DC   C  RC LSSR  +C RACGTCCARC CV PGTSGNYD CPCY ++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

P46688 Gibberellin-regulated protein 27.8e-2068.33Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG  C  RC  SSR K+C RAC +CC+RC CVPPGTSGN  +CPCYA++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

P46689 Gibberellin-regulated protein 13.7e-2273.33Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG AC ARC+LS R ++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

Q8GWK5 Gibberellin-regulated protein 98.6e-1965Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        +CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCYA++ THG + KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

Q93X17 Snakin-27.5e-2373.33Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG AC ARC+LSSR ++C RACGTCCARC CVPPGTSGN + CPCYA++TTHG + KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein6.1e-2065Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        +CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCYA++ THG + KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

AT1G75750.1 GAST1 protein homolog 12.6e-2373.33Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG AC ARC+LS R ++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

AT1G75750.2 GAST1 protein homolog 12.6e-2373.33Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG AC ARC+LS R ++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

AT2G18420.1 Gibberellin-regulated family protein5.9e-2371.67Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DC   C  RC LSSR  +C RACGTCCARC CV PGTSGNYD CPCY ++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

AT4G09610.1 GAST1 protein homolog 25.5e-2168.33Show/hide
Query:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
        DCG  C  RC  SSR K+C RAC +CC+RC CVPPGTSGN  +CPCYA++TTHGGR KCP
Subjt:  DCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTGCACCCATGTTGTTGCGTTAATTCTTGTTGCTTACTTACCAAAGTCCTAGTCTCTCTTGCAGATTGTGGTGTGGCTTGTGATGCACGGTGCCAATTATCGTCGAG
GCAGAAGATGTGTAAGAGGGCATGTGGAACCTGCTGCGCTCGCTGTCAATGTGTTCCACCGGGTACTTCGGGCAACTACGACGTTTGTCCCTGCTATGCCAATATGACCA
CACACGGTGGCAGGCACAAGTGTCCC
mRNA sequenceShow/hide mRNA sequence
CACTTGCACCCATGTTGTTGCGTTAATTCTTGTTGCTTACTTACCAAAGTCCTAGTCTCTCTTGCAGATTGTGGTGTGGCTTGTGATGCACGGTGCCAATTATCGTCGAG
GCAGAAGATGTGTAAGAGGGCATGTGGAACCTGCTGCGCTCGCTGTCAATGTGTTCCACCGGGTACTTCGGGCAACTACGACGTTTGTCCCTGCTATGCCAATATGACCA
CACACGGTGGCAGGCACAAGTGTCCC
Protein sequenceShow/hide protein sequence
HLHPCCCVNSCCLLTKVLVSLADCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP