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MS021854 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021854
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1:780471..780776
RNA-Seq ExpressionMS021854
SyntenyMS021854
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY15016.1 Uncharacterized protein TCM_034216 [Theobroma cacao]1.9e-2057.41Show/hide
Query:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE
        + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+ F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++
Subjt:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE

Query:  AQNLHVLV
         +   VLV
Subjt:  AQNLHVLV

KAG7024157.1 hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2385.29Show/hide
Query:  MKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLFHRIRKIL+R VFS PSRVS R++T+YDK ++PPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
Subjt:  MKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

KGN60030.1 hypothetical protein Csa_001336 [Cucumis sativus]1.7e-2974.04Show/hide
Query:  MQRPKTEAL------AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRV--SPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEV
        MQRPKT A       +++S S SLNFSSMKLF RIRK+L+R VFS PSRV  S RR+TSYDKSF+PPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD  
Subjt:  MQRPKTEAL------AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRV--SPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEV

Query:  LEAQ
         E Q
Subjt:  LEAQ

RDX72233.1 hypothetical protein CR513_48306, partial [Mucuna pruriens]1.4e-2069.05Show/hide
Query:  LNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVL
        LN S+MKLF R RKILMRLVFS PSR S   +      FEPPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD VL+A+   V+
Subjt:  LNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVL

XP_007017791.2 PREDICTED: uncharacterized protein LOC18591544 [Theobroma cacao]1.9e-2057.41Show/hide
Query:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE
        + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+ F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++
Subjt:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE

Query:  AQNLHVLV
         +   VLV
Subjt:  AQNLHVLV

TrEMBL top hitse value%identityAlignment
A0A061FD82 Uncharacterized protein9.1e-2157.41Show/hide
Query:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE
        + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+ F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++
Subjt:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE

Query:  AQNLHVLV
         +   VLV
Subjt:  AQNLHVLV

A0A0A0LDK4 Uncharacterized protein8.2e-3074.04Show/hide
Query:  MQRPKTEAL------AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRV--SPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEV
        MQRPKT A       +++S S SLNFSSMKLF RIRK+L+R VFS PSRV  S RR+TSYDKSF+PPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD  
Subjt:  MQRPKTEAL------AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRV--SPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEV

Query:  LEAQ
         E Q
Subjt:  LEAQ

A0A371F207 Uncharacterized protein (Fragment)6.9e-2169.05Show/hide
Query:  LNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVL
        LN S+MKLF R RKILMRLVFS PSR S   +      FEPPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD VL+A+   V+
Subjt:  LNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVL

A0A6J1ADC8 uncharacterized protein LOC1104170849.1e-2157.41Show/hide
Query:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE
        + R  T    A++ S  LNFS+MKLF+R RKILMRL+FS PS  S        ++T+ D+ F+PPKTSCSSYYSSHSHY EAIADCIEFFNKSSQ+ +++
Subjt:  MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVS------PRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLE

Query:  AQNLHVLV
         +   VLV
Subjt:  AQNLHVLV

A0A7N2QYF0 Uncharacterized protein9.1e-2163.37Show/hide
Query:  AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKS-------FEPPKTSCSSYYSSHSHYDEAIADCIEFFNK-SSQDEVLEAQNLHVL
        A+++ S  LNFS+MKLF+R RKILMRL+FS PSR S    T    S       FEPPKTSCSSYYSSHSHY+EAIADCIEFFNK SSQ+ VL+  N  V+
Subjt:  AAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKS-------FEPPKTSCSSYYSSHSHYDEAIADCIEFFNK-SSQDEVLEAQNLHVL

Query:  V
        V
Subjt:  V

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75717.1 unknown protein2.1e-1462.5Show/hide
Query:  MKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKS-----FEPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS
        MKLFH++ KILMRL+       S R+K +  +S     FEPPK SC SSYYSSH HY EAIADCIEFFNKSS
Subjt:  MKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKS-----FEPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCCTAAAACCGAAGCCCTTGCCGCTGCTTCTCATTCCAAATCTCTCAACTTCTCCTCCATGAAGCTCTTCCATCGAATCCGTAAGATACTGATGCGGCTGGT
GTTCTCTTTTCCATCACGAGTGTCGCCGAGACGAAAAACGAGCTACGACAAGTCGTTTGAGCCACCGAAAACGTCATGTAGCTCGTATTACTCTTCCCACTCCCACTACG
ACGAAGCCATTGCCGATTGCATCGAGTTCTTCAACAAGTCGTCACAAGATGAGGTTTTGGAGGCTCAAAACCTCCATGTTTTAGTA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGGCCTAAAACCGAAGCCCTTGCCGCTGCTTCTCATTCCAAATCTCTCAACTTCTCCTCCATGAAGCTCTTCCATCGAATCCGTAAGATACTGATGCGGCTGGT
GTTCTCTTTTCCATCACGAGTGTCGCCGAGACGAAAAACGAGCTACGACAAGTCGTTTGAGCCACCGAAAACGTCATGTAGCTCGTATTACTCTTCCCACTCCCACTACG
ACGAAGCCATTGCCGATTGCATCGAGTTCTTCAACAAGTCGTCACAAGATGAGGTTTTGGAGGCTCAAAACCTCCATGTTTTAGTA
Protein sequenceShow/hide protein sequence
MQRPKTEALAAASHSKSLNFSSMKLFHRIRKILMRLVFSFPSRVSPRRKTSYDKSFEPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDEVLEAQNLHVLV