CuGenDBv2

Gene ID	MS021857
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein SPA, chloroplastic
Genome location	scaffold1:796999..798156
RNA-Seq Expression	MS021857
Synteny	MS021857
Gene Ontology terms	GO:0010206 - photosystem II repair (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003756 - protein disulfide isomerase activity (molecular function)
InterPro domains	IPR035272 - Protein of unknown function DUF5351 IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136388.1 protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus]

2.0e-74

92.05

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPT + SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGD+KEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

XP_008466492.1 PREDICTED: protein SPA, chloroplastic [Cucumis melo]

1.8e-75

94.04

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPTS+ SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

XP_022142253.1 protein SPA, chloroplastic [Momordica charantia]

7.2e-80

100

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

XP_022936404.1 protein SPA, chloroplastic [Cucurbita moschata]

1.7e-76

94.7

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

XP_038899789.1 protein SPA, chloroplastic [Benincasa hispida]

1.1e-75

93.38

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APS+SRLHSPFLY PLKPTS+ SLS+TFSRNQRSPA+YPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINC+G GTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ55 Uncharacterized protein

9.8e-75

92.05

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPT + SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGD+KEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

A0A1S3CRE4 protein SPA, chloroplastic

8.9e-76

94.04

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPTS+ SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

A0A6J1CMU6 protein SPA, chloroplastic

3.5e-80

100

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

A0A6J1F877 protein SPA, chloroplastic

8.1e-77

94.7

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

A0A6J1IFD3 protein SPA, chloroplastic

8.1e-77

94.7

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK
        MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+
Subjt:  MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQK

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRR
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

SwissProt top hits

e value

%identity

Alignment

K4BVL1 Protein SPA, chloroplastic

1.7e-60

74.51

Show/hide

Query:  MTTAPSLSRLHSPFLYSPLK-PT-SAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA
        M TAPSLSR  SPF+ SPLK PT S++  +  F +  R   SYP I+A+DLDQNTV+A++VG++SVA+G+GIPVFYETQIDNAAKRENTQPCFPC+G+GA
Subjt:  MTTAPSLSRLHSPFLYSPLK-PT-SAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA

Query:  QKCRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        QKCRFCMGTG+VTVELGG E EVSRCINC+G G LTCTTCQGSGIQPRYLDRR
Subjt:  QKCRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

Q8GSJ6 Protein disulfide-isomerase LQY1, chloroplastic

5.2e-57

73.33

Show/hide

Query:  TAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKC
        +APS  RLHSPF++ P+  T     S   +RN RSP+ SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQKC
Subjt:  TAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKC

Query:  RFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        R C+G+GNVTVELGG EKEVS CINC+G G+LTCTTCQGSG+QPRYLDRR
Subjt:  RFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

Arabidopsis top hits

e value

%identity

Alignment

AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

3.7e-58

73.33

Show/hide

Query:  TAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKC
        +APS  RLHSPF++ P+  T     S   +RN RSP+ SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQKC
Subjt:  TAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKC

Query:  RFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR
        R C+G+GNVTVELGG EKEVS CINC+G G+LTCTTCQGSG+QPRYLDRR
Subjt:  RFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRR

AT2G24860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

4.8e-05

28.36

Show/hide

Query:  CFPCSGSGAQKCRFCMGTGNVTVELGGDE------KEVSRCINCEGVGTLTCTTCQGSGIQPRYLDR
        C  C+  G  +C++C GTG   +   GD          + C+ C G G+ +C+ C+G+G + ++L++
Subjt:  CFPCSGSGAQKCRFCMGTGNVTVELGGDE------KEVSRCINCEGVGTLTCTTCQGSGIQPRYLDR

AT4G13670.1 plastid transcriptionally active 5

4.0e-04

30.69

Show/hide

Query:  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDE--KEVSRCINCEGVGTLTCTTCQ
        R +D+ QN V  L        S  +G   PV      D +        C  C G G   C  C GTG   +E    E   E ++C  CEG+G   C  C 
Subjt:  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDE--KEVSRCINCEGVGTLTCTTCQ

Query:  G
        G
Subjt:  G

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACAACAGCACCTTCGCTTTCTCGCCTCCACTCTCCGTTTCTGTATTCTCCTCTCAAACCCACTTCAGCTGCCTCTCTATCACTCACATTTTCCAGAAATCAACGGTC
TCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTGGGGCTGGTGAGTGTTGCAGTTGGAATAGGCATTCCCGTCTTCT
ATGAAACCCAAATTGATAATGCTGCGAAGCGTGAGAATACCCAGCCTTGCTTTCCCTGCAGTGGTTCGGGAGCACAGAAGTGCAGATTTTGTATGGGAACTGGCAATGTG
ACCGTAGAACTCGGTGGAGATGAAAAGGAAGTTTCCCGTTGTATTAACTGTGAAGGTGTTGGCACATTGACTTGCACTACATGTCAGGGCTCTGGAATTCAACCTCGATA
TCTAGATCGCAGGTATGGTTTTGCATCTTGC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNV
TVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRRYGFASC

MS021857 (gene) of Bitter gourd (TR) v1 genome