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MS021861 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021861
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationscaffold1:821769..822071
RNA-Seq ExpressionMS021861
SyntenyMS021861
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608586.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4081.13Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ
        MG+RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+IVPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQ
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ

Query:  SLTSSL
        SLTS+L
Subjt:  SLTSSL

XP_022139868.1 auxin-responsive protein SAUR50-like [Momordica charantia]5.9e-5199.01Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL
        MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRY+VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL

Query:  T
        T
Subjt:  T

XP_022937029.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]2.4e-3680.39Show/hide
Query:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS
        TK PQT  AVLKQ++KRCSS+GRKQ QHYD       DVPKGHFVVYVG+NR+RYIVPITFLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS
Subjt:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS

Query:  SL
        +L
Subjt:  SL

XP_022941161.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]3.0e-3980.19Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ
        M +RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+IVPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQ
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ

Query:  SLTSSL
        SLTS+L
Subjt:  SLTSSL

XP_023535895.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]9.2e-3679.41Show/hide
Query:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS
        TK PQT  AVLKQ++KRCSS+GRKQ  HYD       DVPKGHFVVYVG+NR+RYIVPITFLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS
Subjt:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS

Query:  SL
        +L
Subjt:  SL

TrEMBL top hitse value%identityAlignment
A0A6J1CGP8 auxin-responsive protein SAUR50-like2.9e-5199.01Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL
        MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRY+VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL

Query:  T
        T
Subjt:  T

A0A6J1F9Z6 auxin-responsive protein SAUR50-like1.2e-3680.39Show/hide
Query:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS
        TK PQT  AVLKQ++KRCSS+GRKQ QHYD       DVPKGHFVVYVG+NR+RYIVPITFLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS
Subjt:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS

Query:  SL
        +L
Subjt:  SL

A0A6J1FKC5 auxin-responsive protein SAUR50-like1.5e-3980.19Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ
        M +RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+IVPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQ
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ

Query:  SLTSSL
        SLTS+L
Subjt:  SLTSSL

A0A6J1IE85 auxin-responsive protein SAUR50-like1.2e-3680.39Show/hide
Query:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS
        TK PQT  AVLKQ++KRCSS+GRKQ QHYD       DVPKGHFVVYVG+NR+RYIVPITFLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS
Subjt:  TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS

Query:  SL
        +L
Subjt:  SL

A0A6J1J0M7 auxin-responsive protein SAUR50-like1.5e-3980.19Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ
        M +RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+IVPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQ
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ

Query:  SLTSSL
        SLTS+L
Subjt:  SLTSSL

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.6e-3065.71Show/hide
Query:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-QHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQS
        M+K++K  QT  A+LKQILKRCSSLG+K    YD      DVPKGHF VYVG+NR+RYIVPI+FL +P+FQ LLQ+A +EFGFDHDMGLTIPCD+  FQ+
Subjt:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-QHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQS

Query:  LTSSL
        LTS +
Subjt:  LTSSL

P0DKL1 Auxin-responsive protein SAUR506.0e-2252.48Show/hide
Query:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQQHY---DDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSS
        +RKS K  QT    +K+I+K+CSS G+        +DVPKGHFVVYVG+ R RYIVPI+ L++P FQ LLQ++ +EFGF+HDMG+ IPC +  F S  S 
Subjt:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQQHY---DDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSS

Query:  L
        +
Subjt:  L

P32295 Indole-3-acetic acid-induced protein ARG76.4e-1647.67Show/hide
Query:  LKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDM-GLTIPCDDHFFQSLTSSLT
        L  I K  S+         D PKG+  VYVG+N  R+++P++ LN P FQ LL QA +EFG+DH M GLTIPC +  FQ +TS L+
Subjt:  LKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDM-GLTIPCDDHFFQSLTSSLT

P33081 Auxin-induced protein 15A1.1e-1552.05Show/hide
Query:  RKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDM-GLTIPCDDHFFQSLTSSL
        RK     D PKG+  VYVG+   R+++P+++LN P FQ LL QA +EFG+DH M GLTIPC +  FQ +TS L
Subjt:  RKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDM-GLTIPCDDHFFQSLTSSL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 104.0e-2655.05Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQ----HYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCD
        M +++S+KA  +  A +KQI+KRCSSL + +     +Y+       DVPKGHF VYVG NR+RYIVPI++L++ +FQ LL+ A +EFGFDHDMGLTIPCD
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQ----HYD-------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCD

Query:  DHFFQSLTS
        + FF+SL S
Subjt:  DHFFQSLTS

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family3.8e-3262.39Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD---------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDH
        M M+K+ K  QT  A++KQILKRCSSLG+KQ +           +VPKGHFVVYVG+NR RY+VPI+FL  P+FQ+LLQQA +EFGFDHDMGLTIPC++ 
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD---------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDH

Query:  FFQSLTSSL
         F+SLTS L
Subjt:  FFQSLTSSL

AT2G16580.1 SAUR-like auxin-responsive protein family1.0e-2963.21Show/hide
Query:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-----QHYD---DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ
        ++KSTK  QT  A+L+QILKRCSSLG+K      +  D   DVPKGHF VYVG NR+RYIVPI+FL    FQ LL++A +EFGFDHDMGLTIPCD+ FFQ
Subjt:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-----QHYD---DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ

Query:  SLTSSL
         LTS +
Subjt:  SLTSSL

AT2G21220.1 SAUR-like auxin-responsive protein family1.4e-2962.26Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ
        M +++S+K  QT  A+LKQILKRCSSL  K Q YD      DVPKGHF VYVG+ R+RYIVPI+FL +P+F+ LLQQA +EFGF+HDMGLTIPC++  F+
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQ

Query:  SLTSSL
        SLTS +
Subjt:  SLTSSL

AT4G34760.1 SAUR-like auxin-responsive protein family1.1e-3165.71Show/hide
Query:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-QHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQS
        M+K++K  QT  A+LKQILKRCSSLG+K    YD      DVPKGHF VYVG+NR+RYIVPI+FL +P+FQ LLQ+A +EFGFDHDMGLTIPCD+  FQ+
Subjt:  MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-QHYD------DVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQS

Query:  LTSSL
        LTS +
Subjt:  LTSSL

AT4G36110.1 SAUR-like auxin-responsive protein family3.6e-3061.39Show/hide
Query:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQ---HYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLT
        M ++KS KA  +  A LKQILKRCSSLG+K Q   +++DVPKGHF VYVGQ+R+RY+VPI++L++ +FQ LLQ A +EFGF+H+MGLTIPCD+  F+SL 
Subjt:  MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQ---HYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLT

Query:  S
        S
Subjt:  S


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATGAGAAAGTCGACGAAAGCGCCACAGACGGCGCCGGCGGTGCTGAAGCAGATCCTGAAGCGGTGCTCCAGCCTGGGGAGGAAGCAGCAGCACTACGACGACGT
CCCCAAAGGCCATTTCGTGGTGTACGTTGGCCAAAACCGAACCAGATACATTGTCCCCATCACATTCCTAAACTACCCTCAGTTCCAAATCTTACTCCAGCAGGCCGCTG
ACGAGTTCGGCTTCGACCACGACATGGGCCTCACCATTCCCTGCGACGACCACTTCTTTCAGTCCCTCACCTCATCCCTCACG
mRNA sequenceShow/hide mRNA sequence
ATGGGGATGAGAAAGTCGACGAAAGCGCCACAGACGGCGCCGGCGGTGCTGAAGCAGATCCTGAAGCGGTGCTCCAGCCTGGGGAGGAAGCAGCAGCACTACGACGACGT
CCCCAAAGGCCATTTCGTGGTGTACGTTGGCCAAAACCGAACCAGATACATTGTCCCCATCACATTCCTAAACTACCCTCAGTTCCAAATCTTACTCCAGCAGGCCGCTG
ACGAGTTCGGCTTCGACCACGACATGGGCCTCACCATTCCCTGCGACGACCACTTCTTTCAGTCCCTCACCTCATCCCTCACG
Protein sequenceShow/hide protein sequence
MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT