; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021863 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021863
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin responsive SAUR protein
Genome locationscaffold1:848474..848923
RNA-Seq ExpressionMS021863
SyntenyMS021863
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011652445.1 auxin-induced protein 6B [Cucumis sativus]6.5e-7896Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRSES NSGRF  LDDFQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

XP_022138000.1 auxin-induced protein 6B-like [Momordica charantia]6.7e-83100Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

XP_022936801.1 auxin-induced protein 6B [Cucurbita moschata]2.9e-7895.33Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRS+S NSGRF  LD+FQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

XP_023535898.1 auxin-induced protein 6B [Cucurbita pepo subsp. pepo]3.8e-7895.33Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRS+S NSGRF  LD+FQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

XP_038899268.1 auxin-induced protein 6B-like [Benincasa hispida]1.7e-7895.33Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHP+FKKLLVQAEEEYGFTNQGPLAIPC+ESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRSES NSGRF  LDDFQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

TrEMBL top hitse value%identityAlignment
A0A1S3CRK3 auxin-induced protein 6B4.1e-7895.33Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRATYLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRSES NSGRF  LDDFQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

A0A5D3E601 Auxin-induced protein 6B4.1e-7895.33Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRATYLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRSES NSGRF  LDDFQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

A0A6J1C879 auxin-induced protein 6B-like3.2e-83100Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

A0A6J1F8H9 auxin-induced protein 6B1.4e-7895.33Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRS+S NSGRF  LD+FQ YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

A0A6J1IP24 auxin-induced protein 6B1.6e-7794Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRA YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIR

Query:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW
        FISRS+S NSGRF  LD+FQ +CHIGIRTGLDLWPESRPLLHGLAEKSIW
Subjt:  FISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR409.9e-1350.65Show/hide
Query:  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSG
        + S VP+GHV V VG    RFVV A  LNHPVF  LL ++ +EYG+T +G L IPC+  VFE+V+      ES  SG
Subjt:  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSG

O65695 Auxin-responsive protein SAUR504.4e-1339.6Show/hide
Query:  KCSKIRHIVRLRQMLRRW-----RNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRF
        K SK+     L+Q+L+R      +N      + +P DVP GH  V VG +  R++V  ++L HP F+ LL +AEEE+GF +   L IPCDE VF+ +   
Subjt:  KCSKIRHIVRLRQMLRRW-----RNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRF

Query:  I
        I
Subjt:  I

P33083 Auxin-induced protein 6B1.7e-1248.15Show/hide
Query:  KARMSANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN-QGPLAIPCDESVFEEVIRFIS
        KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL QAEEE+G+ +  G L IPC E VF+ +  F++
Subjt:  KARMSANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN-QGPLAIPCDESVFEEVIRFIS

Q9SA49 Auxin-responsive protein SAUR413.7e-1246.15Show/hide
Query:  VPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNL
        VPAGHV V VG    RFVV A  +NHP+F  LL ++ +EYG+  +G L IPC   VFE V+  +       SG   NL
Subjt:  VPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNL

Q9SGU2 Auxin-responsive protein SAUR711.3e-1247.5Show/hide
Query:  MLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVI
        +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL Q+ +EYG+  QG L IPC   VFE ++
Subjt:  MLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVI

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family3.9e-5770.13Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMS--ANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEV
        M+    KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+ CRRFVVRA+YLNHP+   LLVQAEEE+GF NQGPL IPC+ESVFEE 
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMS--ANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEV

Query:  IRFISRSESTNSGRFGNLDDFQRYCH--IGIRTGLDLWPESRPLLHGLAEKSIW
        IRFISRS+S+ S RF   DD Q+ C+  I I++ LDL  ESRPLLHG+AEK+IW
Subjt:  IRFISRSESTNSGRFGNLDDFQRYCH--IGIRTGLDLWPESRPLLHGLAEKSIW

AT1G75590.1 SAUR-like auxin-responsive protein family6.3e-6374.03Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSAN---RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEE
        M+ G GKCSKIRHIVRLRQMLRRWR++ARMS++    +PSDVP+GHVAV VG+SCRRFVVRATYLNHPV + LLVQAEEE+GF NQGPL IPC+ESVFEE
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSAN---RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VIRFISRSESTNSGRFGNLDDFQRYCH-IGIRTGLDLWPESRPLLHGLAEKSIW
         IRFISRS+ST S RF   DDFQ+ CH +GIR+ LDLW ESRPLLHG+ EK++W
Subjt:  VIRFISRSESTNSGRFGNLDDFQRYCH-IGIRTGLDLWPESRPLLHGLAEKSIW

AT4G34750.1 SAUR-like auxin-responsive protein family5.7e-4054.97Show/hide
Query:  GKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFIS
        GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +LNHP+F++LL +AEEEYGF N GPLAIPCDES+FE++I  ++
Subjt:  GKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFIS

Query:  RSESTNSGRFGN-----LDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSI
        R ES++S   GN     L+D +R  H+G+        ESRPLL G+AEKS+
Subjt:  RSESTNSGRFGN-----LDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSI

AT4G34750.2 SAUR-like auxin-responsive protein family5.7e-4054.97Show/hide
Query:  GKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFIS
        GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +LNHP+F++LL +AEEEYGF N GPLAIPCDES+FE++I  ++
Subjt:  GKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFIS

Query:  RSESTNSGRFGN-----LDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSI
        R ES++S   GN     L+D +R  H+G+        ESRPLL G+AEKS+
Subjt:  RSESTNSGRFGN-----LDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSI

AT5G10990.1 SAUR-like auxin-responsive protein family6.9e-5468.87Show/hide
Query:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANR--IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEV
        M+ G GKCSKIRHIV+LRQMLR+WRNKARMS+ R  +PSDVP+GHVAV VG SCRRFVV ATYLNHP+   LLV+AEEE+GF NQGPL IPC+ESVFEE 
Subjt:  MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANR--IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEV

Query:  IRFISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSI
        IRFI+R     S RF   DD ++  H GIR+ LDL  ESRPLLHG++EK+I
Subjt:  IRFISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCGGATTCGGAAAATGCAGCAAAATCCGGCACATTGTCCGGCTCCGCCAAATGCTCCGAAGGTGGCGCAACAAGGCCCGTATGTCCGCCAACCGCATCCCCTC
CGACGTCCCCGCCGGCCACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGGTTCGTCGTCCGGGCGACCTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTCCAAG
CCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCCATCCCCTGCGACGAGTCGGTCTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGACCAACTCG
GGCCGGTTCGGGAATCTGGATGATTTCCAGAGATACTGCCACATCGGAATCAGAACCGGTCTGGATTTATGGCCGGAATCCCGACCTCTGCTTCATGGGTTGGCCGAGAA
ATCCATCTGG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCGGATTCGGAAAATGCAGCAAAATCCGGCACATTGTCCGGCTCCGCCAAATGCTCCGAAGGTGGCGCAACAAGGCCCGTATGTCCGCCAACCGCATCCCCTC
CGACGTCCCCGCCGGCCACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGGTTCGTCGTCCGGGCGACCTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTCCAAG
CCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCCATCCCCTGCGACGAGTCGGTCTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGACCAACTCG
GGCCGGTTCGGGAATCTGGATGATTTCCAGAGATACTGCCACATCGGAATCAGAACCGGTCTGGATTTATGGCCGGAATCCCGACCTCTGCTTCATGGGTTGGCCGAGAA
ATCCATCTGG
Protein sequenceShow/hide protein sequence
MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNS
GRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW