; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021880 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021880
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMADS box protein
Genome locationscaffold1:943213..946318
RNA-Seq ExpressionMS021880
SyntenyMS021880
Gene Ontology termsGO:0010093 - specification of floral organ identity (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0031011 - Ino80 complex (cellular component)
GO:0071339 - MLL1 complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0002151 - G-quadruplex RNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR002487 - Transcription factor, K-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136271.1 floral homeotic protein DEFICIENS [Momordica charantia]1.6e-11493.48Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDA VSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNHPNIHHAPPPDLTTYPLLE
        PRIFALRLQPNHPNIHHAPPPDLTTYPLLE
Subjt:  PRIFALRLQPNHPNIHHAPPPDLTTYPLLE

XP_022935915.1 floral homeotic protein DEFICIENS-like [Cucurbita moschata]4.0e-10584.49Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-----------GGD
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV           GGD
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-----------GGD

Query:  YDSIMGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
        YDS+MG+  GG  PRIFALRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  YDSIMGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

XP_022974786.1 floral homeotic protein DEFICIENS-like [Cucurbita maxima]1.5e-10485.48Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV       GGDY+SI
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI

Query:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
        MG+  GG  PRIF LRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

XP_023536122.1 floral homeotic protein DEFICIENS-like [Cucurbita pepo subsp. pepo]3.4e-10482.73Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV--------------
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV              
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV--------------

Query:  -GGDYDSIMGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
         GGDY+S+MG+  GG  PRIFALRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  -GGDYDSIMGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

XP_038897180.1 agamous-like MADS-box protein AP3 [Benincasa hispida]3.1e-10586.36Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLW+SHYERMQENLKKLKDV+RN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVG---GDYDSIMGFS
        LRRQI+QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVG+IHK LLQEFDIATEEDPHYGLVDNGGVG   GDYDSIMGFS
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVG---GDYDSIMGFS

Query:  GGG-PRIFALRLQP------NHPNI--HHAPPPDLTTYPLLE
        GGG PRIFALRLQP      NHPNI  HH PP DLTTYPLLE
Subjt:  GGG-PRIFALRLQP------NHPNI--HHAPPPDLTTYPLLE

TrEMBL top hitse value%identityAlignment
A0A5J6MAZ0 AP37.4e-10585.48Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV       GGDY+SI
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI

Query:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
        MG+  GG  PRIF LRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

A0A5J6MD73 AP37.4e-10585.48Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV       GGDY+SI
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI

Query:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
        MG+  GG  PRIF LRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

A0A6J1C324 floral homeotic protein DEFICIENS7.9e-11593.48Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDA VSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNHPNIHHAPPPDLTTYPLLE
        PRIFALRLQPNHPNIHHAPPPDLTTYPLLE
Subjt:  PRIFALRLQPNHPNIHHAPPPDLTTYPLLE

A0A6J1FC15 floral homeotic protein DEFICIENS-like1.9e-10584.49Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-----------GGD
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV           GGD
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-----------GGD

Query:  YDSIMGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
        YDS+MG+  GG  PRIFALRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  YDSIMGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

A0A6J1ICC2 floral homeotic protein DEFICIENS-like7.4e-10585.48Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP+TSTKELFDQYQKTLGVDLWISHY+RMQENLKKLKDVNR+
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI
        LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRER              KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV       GGDY+SI
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGV-------GGDYDSI

Query:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE
        MG+  GG  PRIF LRLQPNHPNIH  H PPPDLTTYPLLE
Subjt:  MGFSGGG--PRIFALRLQPNHPNIH--HAPPPDLTTYPLLE

SwissProt top hitse value%identityAlignment
E0CPH4 Agamous-like MADS-box protein AP38.2e-7765.65Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKI+IKRIEN TNRQVTYSKRRNG+FKKA+ELTVLCDAKVSIIM SSTGKLHEYISP+T+TK++FDQYQ TLGVDLW  HYERMQENLKKLKDVN+N
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LR++IRQRMGE ++DLS EELR LEQ+M+++++++R+R              K+++V +IHK+LL EFD A + D HYGLVDN   GGDY+S++GFS G 
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNHPNIHHAPPPDLTTYPLLE
          +FAL LQPN PN  H+      T+ LLE
Subjt:  PRIFALRLQPNHPNIHHAPPPDLTTYPLLE

P23706 Floral homeotic protein DEFICIENS3.7e-7766.67Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+EL+VLCDAKVSIIM SST KLHEYISP T+TK+LFDQYQK +GVDLW SHYE+MQE+LKKL +VNRN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLK--------------SVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LRR+IRQRMGE +NDL +E++  L +DMDN++++IRERK K              +V EIH++L+ EFD A  EDPH+GLVDN    GDY+S++GF  GG
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLK--------------SVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPN-HPNIHHAPPPDLTTYPLLE
        PRI ALRL  N HP +H     DLTT+ LLE
Subjt:  PRIFALRLQPN-HPNIHHAPPPDLTTYPLLE

P35632 Floral homeotic protein APETALA 35.0e-6657.63Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+ELTVLCDA+VSIIMFSS+ KLHEYISP T+TKE+ D YQ    VD+W + YERMQE  +KL + NRN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVG--------------EIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LR QI+QR+GEC+++L  +ELR LE +M+N  +++RERK KS+G              +I K+L+ E ++   EDPHYGLVDN   GGDYDS++G+   G
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVG--------------EIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNH----PN--IHHAPPPDLTTYPLLE
         R +ALR   NH    PN  +H     D+ T+ LLE
Subjt:  PRIFALRLQPNH----PN--IHHAPPPDLTTYPLLE

Q003J2 Agamous-like MADS-box protein TM63.1e-6860.83Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        M RGKI+IKRIENPTNRQVTYSKRRNG+FKKA ELTVLCDAKVS+IMFS+TGK HEY SP  +TK+++DQYQKTLG+DLW SHYERMQENL+KLK++N  
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LRR+IRQRMGE + DLS E+LR LEQ MD ++ ++RER              K++++ E H +LL  F+ A  +DPHYGLV+N    GDY+S + F+ G 
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNHPNIHH
          ++A RL   HPN+HH
Subjt:  PRIFALRLQPNHPNIHH

Q07472 Floral homeotic protein PMADS 17.7e-7565.25Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHE+ISP+ +TK+LFD YQKT+GVDLW SHYE+MQE L+KLK+VNRN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVG--------------EIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LR++IRQRMGE +NDL++E+L  L +++DN++++IRERK K +G              EIH++LL EFD A +EDP YGLV+     GDY+S++GF  GG
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVG--------------EIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNH--PNIHH----APPPDLTTYPLLE
         RI ALRLQPNH  PN HH        D+TT+ LLE
Subjt:  PRIFALRLQPNH--PNIHH----APPPDLTTYPLLE

Arabidopsis top hitse value%identityAlignment
AT3G54340.1 K-box region and MADS-box transcription factor family protein3.5e-6757.63Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+ELTVLCDA+VSIIMFSS+ KLHEYISP T+TKE+ D YQ    VD+W + YERMQE  +KL + NRN
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVG--------------EIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG
        LR QI+QR+GEC+++L  +ELR LE +M+N  +++RERK KS+G              +I K+L+ E ++   EDPHYGLVDN   GGDYDS++G+   G
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVG--------------EIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGG

Query:  PRIFALRLQPNH----PN--IHHAPPPDLTTYPLLE
         R +ALR   NH    PN  +H     D+ T+ LLE
Subjt:  PRIFALRLQPNH----PN--IHHAPPPDLTTYPLLE

AT5G15800.1 K-box region and MADS-box transcription factor family protein8.2e-2443.75Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISH-----YERMQENLKKLK
        M RG++++KRIEN  NRQVT++KRRNGL KKA EL+VLCDA+V++I+FS+ GKL+E+ S +   K L D+YQK     + +++      E       KLK
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISH-----YERMQENLKKLK

Query:  DVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERK
            NL+RQ R  +GE +  L+ +EL  LE+ +D +++ +R  K
Subjt:  DVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERK

AT5G15800.2 K-box region and MADS-box transcription factor family protein8.2e-2443.75Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISH-----YERMQENLKKLK
        M RG++++KRIEN  NRQVT++KRRNGL KKA EL+VLCDA+V++I+FS+ GKL+E+ S +   K L D+YQK     + +++      E       KLK
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISH-----YERMQENLKKLK

Query:  DVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERK
            NL+RQ R  +GE +  L+ +EL  LE+ +D +++ +R  K
Subjt:  DVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERK

AT5G20240.1 K-box region and MADS-box transcription factor family protein4.2e-2835.05Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN
        M RGKI+IKRIEN  NR VT+SKRRNGL KKA E+TVLCDAKV++I+F+S GK+ +Y  P+     + DQYQK  G  LW + +E +   + ++K  N +
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRN

Query:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKL----------KSVGEIHKSL---LQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGGP
        L+ ++R   GE +  L+ + L  +E  +++ +  +R+ ++          K + E  + L   LQ+ ++A   +        G +  D+D   G+     
Subjt:  LRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKL----------KSVGEIHKSL---LQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGGP

Query:  RIFALRLQPNHPNI
             R+QP  PN+
Subjt:  RIFALRLQPNHPNI

AT5G60910.1 AGAMOUS-like 83.3e-2540.35Show/hide
Query:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTK--ELFDQY----QKTLGVDL-----WISHYERMQE
        M RG++Q+KRIEN  NRQVT+SKRR+GL KKA+E++VLCDA+V++I+FSS GKL EY + +   +  E +D+Y    ++ +G D+     W+  + +++ 
Subjt:  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTK--ELFDQY----QKTLGVDL-----WISHYERMQE

Query:  NLKKLKDVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVGEIHKSLLQEFDIATEE
         ++ L+   RN        MGE ++ LS +EL+ LE  +D A++ IR RK +++ E   S LQ+ D A ++
Subjt:  NLKKLKDVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVGEIHKSLLQEFDIATEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGAGGGAAGATCCAGATCAAGAGAATCGAAAACCCTACGAACAGGCAGGTGACCTACTCGAAGCGGCGCAACGGCCTCTTCAAGAAGGCCAACGAACTCACCGT
CCTCTGCGACGCCAAGGTCTCCATTATCATGTTCTCCAGCACCGGAAAACTCCACGAGTACATCAGCCCCGCCACCTCGACGAAGGAGCTGTTCGATCAGTACCAGAAGA
CTTTAGGCGTTGATCTATGGATCTCTCACTACGAGAGAATGCAAGAGAATCTCAAGAAGCTCAAGGATGTAAATAGAAATCTTCGCAGGCAAATTAGGCAGAGGATGGGG
GAATGCATGAACGATTTGAGTTTTGAGGAACTGCGCTGTCTCGAGCAAGATATGGACAACGCTGTGAGGATCATCCGTGAACGCAAGTTAAAAAGTGTAGGAGAAATACA
CAAGAGTCTTCTCCAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGTTTGGTAGACAATGGAGGAGTAGGAGGAGATTATGATTCTATTATGGGCTTCTCTG
GCGGCGGTCCTCGCATATTTGCCCTGCGTTTACAGCCAAACCACCCCAATATTCACCACGCGCCGCCTCCAGATCTCACAACCTATCCACTGCTCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCGAGGGAAGATCCAGATCAAGAGAATCGAAAACCCTACGAACAGGCAGGTGACCTACTCGAAGCGGCGCAACGGCCTCTTCAAGAAGGCCAACGAACTCACCGT
CCTCTGCGACGCCAAGGTCTCCATTATCATGTTCTCCAGCACCGGAAAACTCCACGAGTACATCAGCCCCGCCACCTCGACGAAGGAGCTGTTCGATCAGTACCAGAAGA
CTTTAGGCGTTGATCTATGGATCTCTCACTACGAGAGAATGCAAGAGAATCTCAAGAAGCTCAAGGATGTAAATAGAAATCTTCGCAGGCAAATTAGGCAGAGGATGGGG
GAATGCATGAACGATTTGAGTTTTGAGGAACTGCGCTGTCTCGAGCAAGATATGGACAACGCTGTGAGGATCATCCGTGAACGCAAGTTAAAAAGTGTAGGAGAAATACA
CAAGAGTCTTCTCCAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGTTTGGTAGACAATGGAGGAGTAGGAGGAGATTATGATTCTATTATGGGCTTCTCTG
GCGGCGGTCCTCGCATATTTGCCCTGCGTTTACAGCCAAACCACCCCAATATTCACCACGCGCCGCCTCCAGATCTCACAACCTATCCACTGCTCGAG
Protein sequenceShow/hide protein sequence
MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQENLKKLKDVNRNLRRQIRQRMG
ECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGGDYDSIMGFSGGGPRIFALRLQPNHPNIHHAPPPDLTTYPLLE