; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021882 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021882
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationscaffold1:958951..960120
RNA-Seq ExpressionMS021882
SyntenyMS021882
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608565.1 Protein SHI RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. sororia]6.0e-10469.52Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG
        M GL YLGGKQED++E+ RGREQQLF Y  R+N+EIYSKGLEIWPQY   Q HQ  +EN+ISF VGPS R N MINA+DH+      F MMR G    GG
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG

Query:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP
        GGG+NCQDCGNQAKKDC+HLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQQR Q     QQ RPD  D TTPKRHRE     PP A TSGLE+AHFP 
Subjt:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP

Query:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI
        EFNSPA+FRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYD GPE++              G+D GQGLDLVIGASN   GR+N S  F+E  +YPIPI
Subjt:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI

Query:  NAYTTGTQFFPPSRT
        N +T G Q FP SRT
Subjt:  NAYTTGTQFFPPSRT

XP_022138262.1 protein SHI RELATED SEQUENCE 1-like [Momordica charantia]5.4e-16999.32Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMN
        MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINAS+HDLVSRSGFAMMRGG GGGGGMN
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMN

Query:  CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIF
        CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIF
Subjt:  CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIF

Query:  RCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT
        RCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT
Subjt:  RCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT

XP_022940027.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita moschata]2.7e-10469.84Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG
        M GL YLGGKQED++E+ RGREQQLF Y  R+N+EIYSKGLEIWPQY   Q HQ  +EN+ISF VGPS R N MINASDH+      F MMR G    GG
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG

Query:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP
        GGG+NCQDCGNQAKKDC+HLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQQR Q     QQ RPD  D TTPKRHRE     PP A TSGLE+AHFP 
Subjt:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP

Query:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI
        EFNSPA+FRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYD GPE++              G+D GQGLDLVIGASN   GR+N S  F+E  +YPIPI
Subjt:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI

Query:  NAYTTGTQFFPPSRT
        N +T G Q FP SRT
Subjt:  NAYTTGTQFFPPSRT

XP_023525481.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]1.1e-10570.79Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG
        M GL YLGGKQED++E+ RGREQQLF Y  R+N+EIYSKGLEIWPQY   Q HQ  +EN+ISF VGPS R N MINASDHD      FAMMR G    GG
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG

Query:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP
        GGG+NCQDCGNQAKKDC+HLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQQR Q     QQ RPD  D TTPKRHRE     PP A TSGLE+AHFP 
Subjt:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP

Query:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI
        EFNSPA+FRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYD GPET+              G+D GQGLDLVIGASN   GR+N S  F+E  +YPIPI
Subjt:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI

Query:  NAYTTGTQFFPPSRT
        N +T G Q FP SRT
Subjt:  NAYTTGTQFFPPSRT

XP_038886896.1 protein EXPRESSION OF TERPENOIDS 1-like [Benincasa hispida]3.8e-10668.67Show/hide
Query:  MRGLFYLGGKQE-DEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGG
        MR L YLGGKQE DEEE IRGREQQLF Y   +N+EIYSKGLEIWP        QQN+EN+ISF V    R NF+INASDH+ VSR GF +MR   GGGG
Subjt:  MRGLFYLGGKQE-DEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGG

Query:  GMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHH--QQLRPDHPDPTTPKRHRENHPPNAS---TSGLEVAHFPP
        GMNCQDCGNQAKKDCSHLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQQRHQI+QHH  QQ + D  D TTPKRH EN PP  +   TSGLEVAHFP 
Subjt:  GMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHH--QQLRPDHPDPTTPKRHRENHPPNAS---TSGLEVAHFPP

Query:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGG--GRMNESPQFMEPPIYPI
        EFNS A+FRCVKVSAIDNVEEQLAYQT++N+GGHMFKGILYD G ET+              GED GQ LDL+IGASN GG   + + +P  ME  +YPI
Subjt:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGG--GRMNESPQFMEPPIYPI

Query:  PINAYTTGTQFFPPSR
         IN + TGTQFFP +R
Subjt:  PINAYTTGTQFFPPSR

TrEMBL top hitse value%identityAlignment
A0A1S3C0M5 protein SHI RELATED SEQUENCE 15.0e-10467.89Show/hide
Query:  MRGLFYLGGKQEDEEEEI--RGREQQLFSYRS-----NQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMR-GG
        MRGL YLGGKQE++EEEI   GREQQLF Y S     N+EIYSKGLEIWP        QQN+EN+ISF V    R N +INASDH+LVSR GF+MMR GG
Subjt:  MRGLFYLGGKQEDEEEEI--RGREQQLFSYRS-----NQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMR-GG

Query:  DGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHH--QQLRPDHPDPTTPKRHRENHPPNAS---TSGLEV
         GGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQI Q+H  QQ + +  D TT KR+ EN P  A+   TSGLEV
Subjt:  DGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHH--QQLRPDHPDPTTPKRHRENHPPNAS---TSGLEV

Query:  AHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV---------------AGEDGGQGLDLVIGASNGGG--GRMNESPQF
        AHFP EFNSPA FRCVKVSAIDNVEEQLAYQT+VNIGGHMFKGILYD GPET+                 GED  Q LDLVIGASNG G   + + S  F
Subjt:  AHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV---------------AGEDGGQGLDLVIGASNGGG--GRMNESPQF

Query:  MEPPIYPIPIN---AYTTGTQFFPPSR
        +E  +YPIPIN      TGTQFFP +R
Subjt:  MEPPIYPIPIN---AYTTGTQFFPPSR

A0A5A7SQY1 Protein SHI RELATED SEQUENCE 15.0e-10467.89Show/hide
Query:  MRGLFYLGGKQEDEEEEI--RGREQQLFSYRS-----NQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMR-GG
        MRGL YLGGKQE++EEEI   GREQQLF Y S     N+EIYSKGLEIWP        QQN+EN+ISF V    R N +INASDH+LVSR GF+MMR GG
Subjt:  MRGLFYLGGKQEDEEEEI--RGREQQLFSYRS-----NQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMR-GG

Query:  DGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHH--QQLRPDHPDPTTPKRHRENHPPNAS---TSGLEV
         GGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQI Q+H  QQ + +  D TT KR+ EN P  A+   TSGLEV
Subjt:  DGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHH--QQLRPDHPDPTTPKRHRENHPPNAS---TSGLEV

Query:  AHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV---------------AGEDGGQGLDLVIGASNGGG--GRMNESPQF
        AHFP EFNSPA FRCVKVSAIDNVEEQLAYQT+VNIGGHMFKGILYD GPET+                 GED  Q LDLVIGASNG G   + + S  F
Subjt:  AHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV---------------AGEDGGQGLDLVIGASNGGG--GRMNESPQF

Query:  MEPPIYPIPIN---AYTTGTQFFPPSR
        +E  +YPIPIN      TGTQFFP +R
Subjt:  MEPPIYPIPIN---AYTTGTQFFPPSR

A0A6J1C9N8 protein SHI RELATED SEQUENCE 1-like2.6e-16999.32Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMN
        MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINAS+HDLVSRSGFAMMRGG GGGGGMN
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMN

Query:  CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIF
        CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIF
Subjt:  CQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIF

Query:  RCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT
        RCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT
Subjt:  RCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT

A0A6J1FN62 protein SHI RELATED SEQUENCE 1-like isoform X11.3e-10469.84Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG
        M GL YLGGKQED++E+ RGREQQLF Y  R+N+EIYSKGLEIWPQY   Q HQ  +EN+ISF VGPS R N MINASDH+      F MMR G    GG
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG

Query:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP
        GGG+NCQDCGNQAKKDC+HLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQQQR Q     QQ RPD  D TTPKRHRE     PP A TSGLE+AHFP 
Subjt:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP

Query:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI
        EFNSPA+FRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYD GPE++              G+D GQGLDLVIGASN   GR+N S  F+E  +YPIPI
Subjt:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI

Query:  NAYTTGTQFFPPSRT
        N +T G Q FP SRT
Subjt:  NAYTTGTQFFPPSRT

A0A6J1J314 protein SHI RELATED SEQUENCE 1-like5.5e-10369.52Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG
        M GL YLGGKQED++E+ RGREQQLF Y  R+N+EIYSKGLEIWPQY   Q HQ  +EN+ISF VGPS R N MINASDH+      F MMR G    GG
Subjt:  MRGLFYLGGKQEDEEEEIRGREQQLFSY--RSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGG---DGG

Query:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP
        GGG+NCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQR       QQ RPD  D TT K HRE     PP   TSGLE+AHFP 
Subjt:  GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENH---PPNASTSGLEVAHFPP

Query:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI
        EFNSPA+FRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYD GPET+              G+D GQGLDLVIGASN   GR+N S  F+E  +YPIPI
Subjt:  EFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPETTV------------AGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPI

Query:  NAYTTGTQFFPPSRT
        N +T G Q FP SRT
Subjt:  NAYTTGTQFFPPSRT

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 13.5e-6244.57Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGRE-------QQLFSYRS-------NQEIYS--KGLEIW-----PQYPHNQHHQQNME-------------NFISFEVGPS
        M   F LGG QE + +EI   +          F YR+       NQEI +  KG E+W     PQ+ H QHHQQ  +               +   VGPS
Subjt:  MRGLFYLGGKQEDEEEEIRGRE-------QQLFSYRS-------NQEIYS--KGLEIW-----PQYPHNQHHQQNME-------------NFISFEVGPS

Query:  RRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDP
         R+ F I+A DH+  SRSGF MMR    GGGG++CQDCGNQAKKDC H+RCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ    +Q  QQ   ++ + 
Subjt:  RRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDP

Query:  TTPKRHRENHPPNAS----------TSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPE------------TTVAGE
           KR RE+  P+AS          T+GLEV  FP +  + A+F+C+++S+I++ E+QLAYQ AV+IGGH+FKGILYDQG E            T+  G 
Subjt:  TTPKRHRENHPPNAS----------TSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPE------------TTVAGE

Query:  DGG------QGLDLVIGASNGGGGRMNESP-QFMEPPIYPIPINAY-TTGTQFFPPSRT
         GG          +    +  GG      P  F++P ++P P++ +   GTQFFPPSR+
Subjt:  DGG------QGLDLVIGASNGGGGRMNESP-QFMEPPIYPIPINAY-TTGTQFFPPSRT

Q9FXH7 Protein SHI RELATED SEQUENCE 72.3e-5046.21Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGRE-----QQLFSYRSNQEIY--SKGLEIWPQYPHNQHHQQN----MENFISFEVGPS-------RRTN---FMINASDHD
        M GLFYLGG+  ++++  + ++        + Y    EIY  +KG EI+P     Q  QQN      N  SF + PS       R TN   +    SDH+
Subjt:  MRGLFYLGGKQEDEEEEIRGRE-----QQLFSYRSNQEIY--SKGLEIWPQYPHNQHHQQN----MENFISFEVGPS-------RRTN---FMINASDHD

Query:  LV--SRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ-----RHQIMQHHQQLRPDHPDPTTPKRH
         V  S  GF + R G+     MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV AAKRRERQ Q       +I   + +   D  D       
Subjt:  LV--SRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ-----RHQIMQHHQQLRPDHPDPTTPKRH

Query:  REN----------HPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET
         ++             NAS+SGLE +H PPE +SPA+FRC++VS+ID+ +E+ AYQTAV+IGGH+FKGILYDQGP +
Subjt:  REN----------HPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET

Q9LQZ5 Protein SHI RELATED SEQUENCE 53.3e-5241.11Show/hide
Query:  MRGLFYLGGK------------QEDEEEEIRGREQQLFSYRSNQEIYSKGLEIW-PQYPHNQHHQQNME---------NFISFEVGPS----------RR
        M G FYLGG+            Q D++   + +   L+ Y+      +KG EIW PQY   Q HQQ  +         NF SF + PS           R
Subjt:  MRGLFYLGGK------------QEDEEEEIRGREQQLFSYRSNQEIYSKGLEIW-PQYPHNQHHQQNME---------NFISFEVGPS----------RR

Query:  TNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDH-----
        + +    SDH+     GF + R      GGMNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWVPAAKRRER  Q   +  H    R        
Subjt:  TNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDH-----

Query:  -----PDPTTPKRH--------RENHPPNA-STSGLEVA-HFPPEFNSPAIFRCVKVSAI--DNVEEQLAYQTAVNIGGHMFKGILYDQGPE--------
              D    K H              NA S SGLEV+ H PPE NSPAIFRCV+VS+I  D  ++  AYQTAVNIGGH+FKGILYDQGPE        
Subjt:  -----PDPTTPKRH--------RENHPPNA-STSGLEVA-HFPPEFNSPAIFRCVKVSAI--DNVEEQLAYQTAVNIGGHMFKGILYDQGPE--------

Query:  ---TTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT
           +T    +  +     +  +N  G  ++ S       +YP  +N++  GT FF P R+
Subjt:  ---TTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT

Q9SD40 Protein SHI RELATED SEQUENCE 19.8e-5744.69Show/hide
Query:  LEIWPQYP------HNQHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFAMM---RGGDGGG-GGMNCQDCGNQAKKDCSHLRCRTCCKSRG
        LE+W  +        +Q HQQ ++ + S     VGPS    F I+       +    AMM    GG GGG GG++CQDCGNQAKKDCSH+RCRTCCKSRG
Subjt:  LEIWPQYP------HNQHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFAMM---RGGDGGG-GGMNCQDCGNQAKKDCSHLRCRTCCKSRG

Query:  FQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNAST---------SGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLA
        F+C THV+STWVPAAKRRERQQQ   +    Q  R +    + PKRHREN P  +S+         SGLEV +FP E +S A+FRCV+VS++++ EE+ A
Subjt:  FQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNAST---------SGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLA

Query:  YQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIG--ASNGGGGRMN-----------------------------ESPQFMEP-PIYPIPINAYT
        YQTAV+IGGH+FKGILYD GP     G  GG G ++V    +S+GGGG                                 +  +++P  +YP PIN + 
Subjt:  YQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIG--ASNGGGGRMN-----------------------------ESPQFMEP-PIYPIPINAYT

Query:  TGTQFFPPSRT
         GTQFFP  R+
Subjt:  TGTQFFPPSRT

Q9XGX0 Protein SHORT INTERNODES3.2e-5546.82Show/hide
Query:  YSKGLEIWPQYPHN--------QHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFA--MMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCC
        Y   LE+W Q+P+N        Q  QQ ++ + S     VGPS R+          L+  SG A  MMR G  G GG +CQDCGNQ+KKDCSH+RCRTCC
Subjt:  YSKGLEIWPQYPHN--------QHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFA--MMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCC

Query:  KSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHP-----------PNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDN
        KSRG  C THVKSTWVPAAKRRERQQQ    +   QQ  P     + PKR RE  P           P+ +TSGLEV +FPPE +S A+FRCV+VS++D+
Subjt:  KSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHP-----------PNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDN

Query:  VEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLV------------IGASNGGGGRMNESPQFMEPPI--YPIPINAYTTGTQFFPPSRT
         EE+ AY+TAV+IGGH+FKG+LYDQGP    +   G Q L+L+            +  +NG  G  + S  +++P    YP PIN + TGT FF  SR+
Subjt:  VEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLV------------IGASNGGGGRMNESPQFMEPPI--YPIPINAYTTGTQFFPPSRT

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 71.7e-5146.21Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGRE-----QQLFSYRSNQEIY--SKGLEIWPQYPHNQHHQQN----MENFISFEVGPS-------RRTN---FMINASDHD
        M GLFYLGG+  ++++  + ++        + Y    EIY  +KG EI+P     Q  QQN      N  SF + PS       R TN   +    SDH+
Subjt:  MRGLFYLGGKQEDEEEEIRGRE-----QQLFSYRSNQEIY--SKGLEIWPQYPHNQHHQQN----MENFISFEVGPS-------RRTN---FMINASDHD

Query:  LV--SRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ-----RHQIMQHHQQLRPDHPDPTTPKRH
         V  S  GF + R G+     MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV AAKRRERQ Q       +I   + +   D  D       
Subjt:  LV--SRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ-----RHQIMQHHQQLRPDHPDPTTPKRH

Query:  REN----------HPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET
         ++             NAS+SGLE +H PPE +SPA+FRC++VS+ID+ +E+ AYQTAV+IGGH+FKGILYDQGP +
Subjt:  REN----------HPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET

AT1G19790.2 SHI-related sequence 71.7e-5146.21Show/hide
Query:  MRGLFYLGGKQEDEEEEIRGRE-----QQLFSYRSNQEIY--SKGLEIWPQYPHNQHHQQN----MENFISFEVGPS-------RRTN---FMINASDHD
        M GLFYLGG+  ++++  + ++        + Y    EIY  +KG EI+P     Q  QQN      N  SF + PS       R TN   +    SDH+
Subjt:  MRGLFYLGGKQEDEEEEIRGRE-----QQLFSYRSNQEIY--SKGLEIWPQYPHNQHHQQN----MENFISFEVGPS-------RRTN---FMINASDHD

Query:  LV--SRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ-----RHQIMQHHQQLRPDHPDPTTPKRH
         V  S  GF + R G+     MNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWV AAKRRERQ Q       +I   + +   D  D       
Subjt:  LV--SRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ-----RHQIMQHHQQLRPDHPDPTTPKRH

Query:  REN----------HPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET
         ++             NAS+SGLE +H PPE +SPA+FRC++VS+ID+ +E+ AYQTAV+IGGH+FKGILYDQGP +
Subjt:  REN----------HPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET

AT1G75520.1 SHI-related sequence 52.3e-5341.11Show/hide
Query:  MRGLFYLGGK------------QEDEEEEIRGREQQLFSYRSNQEIYSKGLEIW-PQYPHNQHHQQNME---------NFISFEVGPS----------RR
        M G FYLGG+            Q D++   + +   L+ Y+      +KG EIW PQY   Q HQQ  +         NF SF + PS           R
Subjt:  MRGLFYLGGK------------QEDEEEEIRGREQQLFSYRSNQEIYSKGLEIW-PQYPHNQHHQQNME---------NFISFEVGPS----------RR

Query:  TNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDH-----
        + +    SDH+     GF + R      GGMNCQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWVPAAKRRER  Q   +  H    R        
Subjt:  TNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDH-----

Query:  -----PDPTTPKRH--------RENHPPNA-STSGLEVA-HFPPEFNSPAIFRCVKVSAI--DNVEEQLAYQTAVNIGGHMFKGILYDQGPE--------
              D    K H              NA S SGLEV+ H PPE NSPAIFRCV+VS+I  D  ++  AYQTAVNIGGH+FKGILYDQGPE        
Subjt:  -----PDPTTPKRH--------RENHPPNA-STSGLEVA-HFPPEFNSPAIFRCVKVSAI--DNVEEQLAYQTAVNIGGHMFKGILYDQGPE--------

Query:  ---TTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT
           +T    +  +     +  +N  G  ++ S       +YP  +N++  GT FF P R+
Subjt:  ---TTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT

AT3G51060.1 Lateral root primordium (LRP) protein-related7.0e-5844.69Show/hide
Query:  LEIWPQYP------HNQHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFAMM---RGGDGGG-GGMNCQDCGNQAKKDCSHLRCRTCCKSRG
        LE+W  +        +Q HQQ ++ + S     VGPS    F I+       +    AMM    GG GGG GG++CQDCGNQAKKDCSH+RCRTCCKSRG
Subjt:  LEIWPQYP------HNQHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFAMM---RGGDGGG-GGMNCQDCGNQAKKDCSHLRCRTCCKSRG

Query:  FQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNAST---------SGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLA
        F+C THV+STWVPAAKRRERQQQ   +    Q  R +    + PKRHREN P  +S+         SGLEV +FP E +S A+FRCV+VS++++ EE+ A
Subjt:  FQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNAST---------SGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLA

Query:  YQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIG--ASNGGGGRMN-----------------------------ESPQFMEP-PIYPIPINAYT
        YQTAV+IGGH+FKGILYD GP     G  GG G ++V    +S+GGGG                                 +  +++P  +YP PIN + 
Subjt:  YQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIG--ASNGGGGRMN-----------------------------ESPQFMEP-PIYPIPINAYT

Query:  TGTQFFPPSRT
         GTQFFP  R+
Subjt:  TGTQFFPPSRT

AT5G66350.1 Lateral root primordium (LRP) protein-related2.2e-5646.82Show/hide
Query:  YSKGLEIWPQYPHN--------QHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFA--MMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCC
        Y   LE+W Q+P+N        Q  QQ ++ + S     VGPS R+          L+  SG A  MMR G  G GG +CQDCGNQ+KKDCSH+RCRTCC
Subjt:  YSKGLEIWPQYPHN--------QHHQQNMENFIS---FEVGPSRRTNFMINASDHDLVSRSGFA--MMRGGDGGGGGMNCQDCGNQAKKDCSHLRCRTCC

Query:  KSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHP-----------PNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDN
        KSRG  C THVKSTWVPAAKRRERQQQ    +   QQ  P     + PKR RE  P           P+ +TSGLEV +FPPE +S A+FRCV+VS++D+
Subjt:  KSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHP-----------PNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDN

Query:  VEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLV------------IGASNGGGGRMNESPQFMEPPI--YPIPINAYTTGTQFFPPSRT
         EE+ AY+TAV+IGGH+FKG+LYDQGP    +   G Q L+L+            +  +NG  G  + S  +++P    YP PIN + TGT FF  SR+
Subjt:  VEEQLAYQTAVNIGGHMFKGILYDQGPETTVAGEDGGQGLDLV------------IGASNGGGGRMNESPQFMEPPI--YPIPINAYTTGTQFFPPSRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGGTTGTTCTATTTGGGTGGGAAACAAGAGGATGAAGAGGAAGAAATTAGAGGGAGAGAACAGCAGCTGTTTTCTTACAGATCAAACCAAGAGATCTATTCCAA
GGGATTGGAGATATGGCCACAGTATCCCCACAATCAGCACCATCAACAAAACATGGAGAATTTCATATCCTTTGAAGTGGGGCCCAGCCGGAGGACCAACTTCATGATCA
ACGCCTCTGATCACGACTTGGTGTCCAGATCAGGGTTTGCGATGATGAGAGGAGGCGACGGTGGCGGCGGCGGGATGAATTGTCAGGACTGTGGGAACCAAGCCAAGAAA
GACTGTAGCCATTTGAGATGCAGAACTTGCTGCAAGAGCCGAGGGTTTCAGTGCCAAACCCATGTCAAAAGTACTTGGGTTCCTGCTGCCAAGCGCCGGGAGCGTCAGCA
ACAACGACACCAAATTATGCAACATCATCAACAATTACGACCAGATCACCCCGATCCAACCACCCCTAAGAGGCACCGTGAAAATCATCCACCCAATGCCTCCACTTCTG
GGTTAGAAGTGGCACACTTTCCACCCGAATTCAATTCTCCAGCCATTTTTCGATGTGTCAAAGTAAGCGCAATCGATAATGTGGAAGAACAATTAGCTTATCAGACAGCT
GTGAACATCGGAGGGCATATGTTCAAAGGAATTCTCTACGACCAAGGCCCCGAAACCACCGTCGCCGGAGAAGACGGGGGCCAAGGGCTGGATCTCGTGATCGGAGCATC
CAACGGAGGTGGGGGAAGAATGAATGAATCACCCCAATTTATGGAGCCTCCAATATATCCAATCCCGATCAACGCCTACACAACGGGTACGCAATTTTTCCCTCCCTCGA
GGACA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGGTTGTTCTATTTGGGTGGGAAACAAGAGGATGAAGAGGAAGAAATTAGAGGGAGAGAACAGCAGCTGTTTTCTTACAGATCAAACCAAGAGATCTATTCCAA
GGGATTGGAGATATGGCCACAGTATCCCCACAATCAGCACCATCAACAAAACATGGAGAATTTCATATCCTTTGAAGTGGGGCCCAGCCGGAGGACCAACTTCATGATCA
ACGCCTCTGATCACGACTTGGTGTCCAGATCAGGGTTTGCGATGATGAGAGGAGGCGACGGTGGCGGCGGCGGGATGAATTGTCAGGACTGTGGGAACCAAGCCAAGAAA
GACTGTAGCCATTTGAGATGCAGAACTTGCTGCAAGAGCCGAGGGTTTCAGTGCCAAACCCATGTCAAAAGTACTTGGGTTCCTGCTGCCAAGCGCCGGGAGCGTCAGCA
ACAACGACACCAAATTATGCAACATCATCAACAATTACGACCAGATCACCCCGATCCAACCACCCCTAAGAGGCACCGTGAAAATCATCCACCCAATGCCTCCACTTCTG
GGTTAGAAGTGGCACACTTTCCACCCGAATTCAATTCTCCAGCCATTTTTCGATGTGTCAAAGTAAGCGCAATCGATAATGTGGAAGAACAATTAGCTTATCAGACAGCT
GTGAACATCGGAGGGCATATGTTCAAAGGAATTCTCTACGACCAAGGCCCCGAAACCACCGTCGCCGGAGAAGACGGGGGCCAAGGGCTGGATCTCGTGATCGGAGCATC
CAACGGAGGTGGGGGAAGAATGAATGAATCACCCCAATTTATGGAGCCTCCAATATATCCAATCCCGATCAACGCCTACACAACGGGTACGCAATTTTTCCCTCCCTCGA
GGACA
Protein sequenceShow/hide protein sequence
MRGLFYLGGKQEDEEEEIRGREQQLFSYRSNQEIYSKGLEIWPQYPHNQHHQQNMENFISFEVGPSRRTNFMINASDHDLVSRSGFAMMRGGDGGGGGMNCQDCGNQAKK
DCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLRPDHPDPTTPKRHRENHPPNASTSGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTA
VNIGGHMFKGILYDQGPETTVAGEDGGQGLDLVIGASNGGGGRMNESPQFMEPPIYPIPINAYTTGTQFFPPSRT