; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021884 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021884
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondehydration-responsive element-binding protein 2D-like
Genome locationscaffold1:1001752..1002267
RNA-Seq ExpressionMS021884
SyntenyMS021884
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651335.1 hypothetical protein Csa_002186 [Cucumis sativus]9.7e-5471.88Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN
        AQASSRKGCMRGKGGP+NAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAA+AYDAAA+KLYGSEAKLNLPQ +       Q        SN
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN

Query:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        NN IAS S T  +  T + S +E  GGLW NENVN D+SIW+EA+MSLDFPIIE++QG F
Subjt:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

XP_004147872.1 dehydration-responsive element-binding protein 2D [Cucumis sativus]9.7e-5471.88Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN
        AQASSRKGCMRGKGGP+NAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAA+AYDAAA+KLYGSEAKLNLPQ +       Q        SN
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN

Query:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        NN IAS S T  +  T + S +E  GGLW NENVN D+SIW+EA+MSLDFPIIE++QG F
Subjt:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

XP_008466672.1 PREDICTED: dehydration-responsive element-binding protein 2D [Cucumis melo]1.5e-5472.5Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN
        AQASSRKGCMRGKGGP+NA+CTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAA+AYDAAA+KLYGSEAKLNLPQ +       Q        SN
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN

Query:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        NN IAS S T +S  T + S +E  GGLW NENVN D+SIW+EA+MSLDFPIIED+QG F
Subjt:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

XP_022138920.1 dehydration-responsive element-binding protein 2D-like [Momordica charantia]4.9e-9098.28Show/hide
Query:  NPKTNHNHNNKTMG--QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQI
        NPKTNHNHNNKTMG  QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQI
Subjt:  NPKTNHNHNNKTMG--QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQI

Query:  SAAQPVATNPPASNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        SAAQPVATNPP SNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
Subjt:  SAAQPVATNPPASNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

XP_038899630.1 dehydration-responsive element-binding protein 2D-like [Benincasa hispida]4.1e-5266.47Show/hide
Query:  NKTMGQAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPP
        N     + AQASSRKGCMRGKGGP+NA+CTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAAVAYDAAA+KLYGSEAKLNLPQ        T PP
Subjt:  NKTMGQAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPP

Query:  ASNNNDIASSSATPNSCPTKTM----SRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
          +          P+   T TM    S +E  G LWG+ENVN D+SIW+EA+MSLDFPII+D+QG F
Subjt:  ASNNNDIASSSATPNSCPTKTM----SRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

TrEMBL top hitse value%identityAlignment
A0A0A0LE58 AP2/ERF domain-containing protein4.7e-5471.88Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN
        AQASSRKGCMRGKGGP+NAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAA+AYDAAA+KLYGSEAKLNLPQ +       Q        SN
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN

Query:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        NN IAS S T  +  T + S +E  GGLW NENVN D+SIW+EA+MSLDFPIIE++QG F
Subjt:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

A0A1S3CRS6 dehydration-responsive element-binding protein 2D7.3e-5572.5Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN
        AQASSRKGCMRGKGGP+NA+CTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAA+AYDAAA+KLYGSEAKLNLPQ +       Q        SN
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN

Query:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        NN IAS S T +S  T + S +E  GGLW NENVN D+SIW+EA+MSLDFPIIED+QG F
Subjt:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

A0A5A7V8B4 Dehydration-responsive element-binding protein 2D7.3e-5572.5Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN
        AQASSRKGCMRGKGGP+NA+CTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAA+AYDAAA+KLYGSEAKLNLPQ +       Q        SN
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAA-----QPVATNPPASN

Query:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        NN IAS S T +S  T + S +E  GGLW NENVN D+SIW+EA+MSLDFPIIED+QG F
Subjt:  NNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

A0A6J1CAV0 dehydration-responsive element-binding protein 2D-like2.4e-9098.28Show/hide
Query:  NPKTNHNHNNKTMG--QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQI
        NPKTNHNHNNKTMG  QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQI
Subjt:  NPKTNHNHNNKTMG--QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQI

Query:  SAAQPVATNPPASNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
        SAAQPVATNPP SNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
Subjt:  SAAQPVATNPPASNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

A0A6J1IXV0 dehydration-responsive element-binding protein 2D-like9.8e-5268.39Show/hide
Query:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPASNNNDIA
        AQASSRKGCMRGKGGP+NA+CTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDT+ EAAVAYDAAA+KLYGS+AKLNLPQ +A++P  + P A       
Subjt:  AQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPASNNNDIA

Query:  SSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF
           A P+  P+  ++ +E  GGLWG+E+VN D+SIW+EA+MSLDFP+I D++GF+
Subjt:  SSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF

SwissProt top hitse value%identityAlignment
O82132 Dehydration-responsive element-binding protein 2A1.7e-2968.6Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN
        S+KGCM+GKGGPEN+ C+F+GVRQR WGKWVAEIREPNRG+RLWLGTF T+QEAA AYD AAK +YG  A+LN P+  A++  +T+
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN

P61827 Dehydration-responsive element-binding protein 2G7.5e-3379.07Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN
        SRKGCM+GKGGPENA CTF+GVRQRTWGKWVAEIREPNRG RLWLGTF+TS EAA+AYD AAKKLYG EAKLNL      Q V  N
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN

Q84ZA1 Dehydration-responsive element-binding protein 2C5.4e-3159.84Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISA---AQPVATNP----PASNNN
        SRKGCM+GKGGPEN  C F+GVRQRTWGKWVAEIREPNRGARLWLGTF+T+ +AA AYD+AA+ LYG  A+LNL   +A   A P A  P    P S N+
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISA---AQPVATNP----PASNNN

Query:  DIASSSATPNSCPTKTMSRLEE
        D  +SS+T +     TM +L++
Subjt:  DIASSSATPNSCPTKTMSRLEE

Q9LQZ2 Dehydration-responsive element-binding protein 2D8.0e-4358.43Show/hide
Query:  QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPA----
        Q   QASSRKGCMRGKGGP+NA+CT+KGVRQRTWGKWVAEIREPNRGARLWLGTFDTS+EAA+AYD+AA+KLYG EA LNLP+   + P   + PA    
Subjt:  QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPA----

Query:  -SNNNDIASSSATPNSCPTKTMSR----LEEFGGLWGNENVNV----DDSIWKEALMSLDFPIIED
         S+N    SSS + + C +  MS      EE    W + NV++    D SIW+EA MSL FP + +
Subjt:  -SNNNDIASSSATPNSCPTKTMSR----LEEFGGLWGNENVNV----DDSIWKEALMSLDFPIIED

Q9SIZ0 Putative dehydration-responsive element-binding protein 2H3.3e-2870.37Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQ
        SRKGCM+GKGGPEN  C + GVRQRTWGKWVAEIREP RGA+LWLGTF +S EAA+AYD A+K +YG  A+LNLP +   Q
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQ

Arabidopsis top hitse value%identityAlignment
AT1G75490.1 Integrase-type DNA-binding superfamily protein5.7e-4458.43Show/hide
Query:  QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPA----
        Q   QASSRKGCMRGKGGP+NA+CT+KGVRQRTWGKWVAEIREPNRGARLWLGTFDTS+EAA+AYD+AA+KLYG EA LNLP+   + P   + PA    
Subjt:  QAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPA----

Query:  -SNNNDIASSSATPNSCPTKTMSR----LEEFGGLWGNENVNV----DDSIWKEALMSLDFPIIED
         S+N    SSS + + C +  MS      EE    W + NV++    D SIW+EA MSL FP + +
Subjt:  -SNNNDIASSSATPNSCPTKTMSR----LEEFGGLWGNENVNV----DDSIWKEALMSLDFPIIED

AT2G40350.1 Integrase-type DNA-binding superfamily protein2.3e-2970.37Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQ
        SRKGCM+GKGGPEN  C + GVRQRTWGKWVAEIREP RGA+LWLGTF +S EAA+AYD A+K +YG  A+LNLP +   Q
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQ

AT5G05410.1 DRE-binding protein 2A1.2e-3068.6Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN
        S+KGCM+GKGGPEN+ C+F+GVRQR WGKWVAEIREPNRG+RLWLGTF T+QEAA AYD AAK +YG  A+LN P+  A++  +T+
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN

AT5G05410.2 DRE-binding protein 2A1.2e-3068.6Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN
        S+KGCM+GKGGPEN+ C+F+GVRQR WGKWVAEIREPNRG+RLWLGTF T+QEAA AYD AAK +YG  A+LN P+  A++  +T+
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN

AT5G18450.1 Integrase-type DNA-binding superfamily protein5.4e-3479.07Show/hide
Query:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN
        SRKGCM+GKGGPENA CTF+GVRQRTWGKWVAEIREPNRG RLWLGTF+TS EAA+AYD AAKKLYG EAKLNL      Q V  N
Subjt:  SRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCCCAAAACCAACCATAACCATAATAACAAAACCATGGGTCAGGCTCAGGCTCAGGCCAGCTCTAGGAAGGGCTGCATGAGGGGCAAGGGCGGCCCTGAGAACGCTGC
TTGCACTTTCAAAGGCGTCCGCCAGCGCACCTGGGGCAAATGGGTCGCCGAGATTCGCGAGCCGAATCGCGGGGCTCGCCTCTGGCTCGGCACCTTCGACACTTCCCAAG
AAGCTGCCGTGGCCTATGACGCTGCCGCCAAGAAGCTCTACGGCTCTGAAGCTAAGCTCAACCTTCCCCAAATCTCTGCTGCGCAGCCGGTTGCTACTAATCCCCCGGCC
TCAAATAATAATGATATTGCTTCTTCCAGTGCCACGCCAAACTCGTGCCCTACCAAGACGATGTCTCGACTGGAGGAGTTTGGAGGGCTCTGGGGGAACGAGAACGTGAA
CGTGGACGACTCAATATGGAAGGAGGCACTGATGTCTTTGGACTTTCCCATCATTGAAGATGAACAAGGGTTTTTC
mRNA sequenceShow/hide mRNA sequence
AACCCCAAAACCAACCATAACCATAATAACAAAACCATGGGTCAGGCTCAGGCTCAGGCCAGCTCTAGGAAGGGCTGCATGAGGGGCAAGGGCGGCCCTGAGAACGCTGC
TTGCACTTTCAAAGGCGTCCGCCAGCGCACCTGGGGCAAATGGGTCGCCGAGATTCGCGAGCCGAATCGCGGGGCTCGCCTCTGGCTCGGCACCTTCGACACTTCCCAAG
AAGCTGCCGTGGCCTATGACGCTGCCGCCAAGAAGCTCTACGGCTCTGAAGCTAAGCTCAACCTTCCCCAAATCTCTGCTGCGCAGCCGGTTGCTACTAATCCCCCGGCC
TCAAATAATAATGATATTGCTTCTTCCAGTGCCACGCCAAACTCGTGCCCTACCAAGACGATGTCTCGACTGGAGGAGTTTGGAGGGCTCTGGGGGAACGAGAACGTGAA
CGTGGACGACTCAATATGGAAGGAGGCACTGATGTCTTTGGACTTTCCCATCATTGAAGATGAACAAGGGTTTTTC
Protein sequenceShow/hide protein sequence
NPKTNHNHNNKTMGQAQAQASSRKGCMRGKGGPENAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSQEAAVAYDAAAKKLYGSEAKLNLPQISAAQPVATNPPA
SNNNDIASSSATPNSCPTKTMSRLEEFGGLWGNENVNVDDSIWKEALMSLDFPIIEDEQGFF