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MS021911 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021911
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description18S rRNA (Guanine-N(7))-methyltransferase RID2
Genome locationscaffold110:60418..61059
RNA-Seq ExpressionMS021911
SyntenyMS021911
Gene Ontology termsGO:0070476 - rRNA (guanine-N7)-methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016435 - rRNA (guanine) methyltransferase activity (molecular function)
InterPro domainsIPR039769 - 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598963.1 18S rRNA (guanine-N(7))-methyltransferase RID2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2085.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

KAG7029924.1 putative 18S rRNA (guanine-N(7))-methyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2085.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

XP_022144411.1 probable 18S rRNA (guanine-N(7))-methyltransferase [Momordica charantia]9.6e-2186.76Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AKLTDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

XP_022973919.1 18S rRNA (guanine-N(7))-methyltransferase RID2 [Cucurbita maxima]1.6e-2085.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

XP_023545523.1 18S rRNA (guanine-N(7))-methyltransferase RID2 [Cucurbita pepo subsp. pepo]1.6e-2085.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

TrEMBL top hitse value%identityAlignment
A0A0A0KQB5 Uncharacterized protein7.9e-2185.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

A0A5A7U884 Putative 18S rRNA (Guanine-N(7))-methyltransferase2.3e-2083.82Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYND EARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

A0A6J1CS87 probable 18S rRNA (Guanine-N(7))-methyltransferase4.6e-2186.76Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AKLTDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

A0A6J1EYX4 18S rRNA (Guanine-N(7))-methyltransferase RID27.9e-2185.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

A0A6J1IG09 18S rRNA (Guanine-N(7))-methyltransferase RID27.9e-2185.29Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQ         AK+TDRALELLALPDDGVPRLLLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

SwissProt top hitse value%identityAlignment
P25627 18S rRNA (guanine(1575)-N(7))-methyltransferase9.6e-0854.55Show/hide
Query:  SRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        SRPE  APPEIFYND+EA KYT S+R+  IQ         AK+T RALELL L        +LDIG
Subjt:  SRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

Q55DA6 Probable 18S rRNA (guanine-N(7))-methyltransferase9.3e-1154.55Show/hide
Query:  SRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        SRPE  APPEIFY+D E++KY+S+SRIIEIQ          K+ +RA ELLA+P+     +LLDIG
Subjt:  SRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

Q58DP0 Probable 18S rRNA (guanine-N(7))-methyltransferase1.9e-0849.23Show/hide
Query:  RPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        RPEL+ PPE++Y+  EARKY  +SR+I++Q          K+T RALELL +P+D  P  +LDIG
Subjt:  RPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

Q9CY21 Probable 18S rRNA (guanine-N(7))-methyltransferase1.8e-0953.85Show/hide
Query:  RPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        RPE   PPE+FY+  EARKY  +SR+I+IQ          K+T+RALELL LP +G P  LLDIG
Subjt:  RPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

Q9LVD0 18S rRNA (guanine-N(7))-methyltransferase RID25.5e-1972.06Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        M++RPEL APPEIFY+D EARKYTSSSRI+EIQ         AKL++RALELLALP+DGVPR LLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG

Arabidopsis top hitse value%identityAlignment
AT5G57280.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein3.9e-2072.06Show/hide
Query:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG
        M++RPEL APPEIFY+D EARKYTSSSRI+EIQ         AKL++RALELLALP+DGVPR LLDIG
Subjt:  MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCAAGACCAGAACTGCAAGCTCCTCCCGAGATATTCTACAACGATGCTGAGGCTCGAAAATATACTTCATCCTCCCGTATCATTGAAATTCAGGCATGCTTGCC
ACCATCTCTAATTAATGCAAAGCTCACAGATAGAGCACTGGAGCTTCTTGCTTTGCCTGATGATGGAGTTCCCAGACTGCTCCTTGATATTGGT
mRNA sequenceShow/hide mRNA sequence
ATGACGTCAAGACCAGAACTGCAAGCTCCTCCCGAGATATTCTACAACGATGCTGAGGCTCGAAAATATACTTCATCCTCCCGTATCATTGAAATTCAGGCATGCTTGCC
ACCATCTCTAATTAATGCAAAGCTCACAGATAGAGCACTGGAGCTTCTTGCTTTGCCTGATGATGGAGTTCCCAGACTGCTCCTTGATATTGGT
Protein sequenceShow/hide protein sequence
MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQACLPPSLINAKLTDRALELLALPDDGVPRLLLDIG